RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ZNF706Q9Y5V0 76 aaPredicted RBP10.38□□□□□ -0.75
HMGCS1-206ENST00000511774 SCGB3A1Q96QR1 104 aa10.37□□□□□ -0.75
HMGCS1-206ENST00000511774 CST9LQ9H4G1 147 aa10.37□□□□□ -0.75
HMGCS1-206ENST00000511774 IGLV8-61A0A075B6I0 122 aa10.36□□□□□ -0.75
HMGCS1-206ENST00000511774 IGLV5-39A0A0G2JS06 123 aa10.36□□□□□ -0.75
HMGCS1-206ENST00000511774 LINC00483Q53H64 154 aa10.36□□□□□ -0.75
HMGCS1-206ENST00000511774 SMCR5Q8TEV8 140 aa10.36□□□□□ -0.75
HMGCS1-206ENST00000511774 RPS29P62273 56 aaKnown RBP10.35□□□□□ -0.75
HMGCS1-206ENST00000511774 MOBPQ13875 183 aa10.35□□□□□ -0.75
HMGCS1-206ENST00000511774 ZNF625Q96I27 306 aaPredicted RBP10.35□□□□□ -0.75
HMGCS1-206ENST00000511774 FAM19A2Q8N3H0 131 aa10.34□□□□□ -0.75
HMGCS1-206ENST00000511774 SSPOA2VEC9 5147 aa10.34□□□□□ -0.75
HMGCS1-206ENST00000511774 SLC25A20O43772 301 aa10.33□□□□□ -0.76
HMGCS1-206ENST00000511774 IGLV9-49A0A0B4J1Y8 123 aa10.32□□□□□ -0.76
HMGCS1-206ENST00000511774 KRTAP4-16G5E9R7 235 aaPredicted RBP10.32□□□□□ -0.76
HMGCS1-206ENST00000511774 MRPL18Q9H0U6 180 aaKnown RBP10.31□□□□□ -0.76
HMGCS1-206ENST00000511774 SPRR1AP35321 89 aa10.3□□□□□ -0.76
HMGCS1-206ENST00000511774 GAGE2AQ6NT46 116 aa10.3□□□□□ -0.76
HMGCS1-206ENST00000511774 AKAP14Q86UN6 197 aa10.3□□□□□ -0.76
HMGCS1-206ENST00000511774 M0R2T5 61 aa10.29□□□□□ -0.76
HMGCS1-206ENST00000511774 ERC2-IT1O76042 136 aa10.29□□□□□ -0.76
HMGCS1-206ENST00000511774 G0S2P27469 103 aa10.29□□□□□ -0.76
HMGCS1-206ENST00000511774 COX17Q14061 63 aa10.29□□□□□ -0.76
HMGCS1-206ENST00000511774 PEA15Q15121 130 aa10.29□□□□□ -0.76
HMGCS1-206ENST00000511774 KIAA1644Q3SXP7 199 aa10.29□□□□□ -0.76
HMGCS1-206ENST00000511774 USH2AO75445 5202 aa10.29□□□□□ -0.76
HMGCS1-206ENST00000511774 PMVKQ15126 192 aa10.28□□□□□ -0.76
HMGCS1-206ENST00000511774 H3BRM9 83 aa10.27□□□□□ -0.77
HMGCS1-206ENST00000511774 PRYO14603 147 aa10.27□□□□□ -0.77
HMGCS1-206ENST00000511774 SSBP3-AS1Q7Z2R9 100 aa10.27□□□□□ -0.77
HMGCS1-206ENST00000511774 IGLC3P0DOY3 106 aa10.26□□□□□ -0.77
HMGCS1-206ENST00000511774 ZNF22P17026 224 aaPredicted RBP10.26□□□□□ -0.77
HMGCS1-206ENST00000511774 KCNQ1DNQ9H478 68 aa10.24□□□□□ -0.77
HMGCS1-206ENST00000511774 C9orf92A6NGG3 77 aa10.23□□□□□ -0.77
HMGCS1-206ENST00000511774 LINC01546A6NGU7 62 aa10.23□□□□□ -0.77
HMGCS1-206ENST00000511774 A0A0U1RRA0 63 aa10.22□□□□□ -0.77
HMGCS1-206ENST00000511774 NCR3O14931 201 aa10.22□□□□□ -0.77
HMGCS1-206ENST00000511774 ETDCA0A1B0GVM5 59 aa10.21□□□□□ -0.77
HMGCS1-206ENST00000511774 LINC00158P58513 81 aa10.2□□□□□ -0.78
HMGCS1-206ENST00000511774 Q9BRP9 147 aa10.19□□□□□ -0.78
HMGCS1-206ENST00000511774 FCGBPQ9Y6R7 5405 aaPredicted RBP10.18□□□□□ -0.78
HMGCS1-206ENST00000511774 TRBV10-3A0A0K0K1G6 114 aa10.18□□□□□ -0.78
HMGCS1-206ENST00000511774 B5MCH6 92 aa10.18□□□□□ -0.78
HMGCS1-206ENST00000511774 hCG_2014768A0A024R1R8 64 aa10.17□□□□□ -0.78
HMGCS1-206ENST00000511774 BOD1L2Q8IYS8 172 aa10.16□□□□□ -0.78
HMGCS1-206ENST00000511774 ANAPC16Q96DE5 110 aa10.16□□□□□ -0.78
HMGCS1-206ENST00000511774 A0A096LNJ9 63 aa10.15□□□□□ -0.78
HMGCS1-206ENST00000511774 LINC01549A6NIU2 74 aa10.15□□□□□ -0.78
HMGCS1-206ENST00000511774 C11orf86A6NJI1 115 aa10.15□□□□□ -0.78
HMGCS1-206ENST00000511774 MT-ND4LP03901 98 aa10.14□□□□□ -0.79
HMGCS1-206ENST00000511774 NDUFA6P56556 154 aa10.14□□□□□ -0.79
HMGCS1-206ENST00000511774 SMIM13P0DJ93 91 aa10.13□□□□□ -0.79
HMGCS1-206ENST00000511774 C9orf153Q5TBE3 101 aa10.13□□□□□ -0.79
HMGCS1-206ENST00000511774 COX6B2Q6YFQ2 88 aa10.13□□□□□ -0.79
HMGCS1-206ENST00000511774 SFTA2Q6UW10 78 aa10.1□□□□□ -0.79
HMGCS1-206ENST00000511774 TMEM170BQ5T4T1 132 aa10.09□□□□□ -0.79
HMGCS1-206ENST00000511774 MIR7-3HGQ8N6C7 128 aa10.09□□□□□ -0.79
HMGCS1-206ENST00000511774 Q6ZRX8 168 aa10.08□□□□□ -0.8
HMGCS1-206ENST00000511774 FA2HQ7L5A8 372 aa10.08□□□□□ -0.8
HMGCS1-206ENST00000511774 TRAV9-1A0A075B6T8 112 aa10.07□□□□□ -0.8
HMGCS1-206ENST00000511774 IGLV6-57P01721 117 aa10.07□□□□□ -0.8
HMGCS1-206ENST00000511774 HRCT1Q6UXD1 115 aa10.07□□□□□ -0.8
HMGCS1-206ENST00000511774 ST20-AS1Q8NBB2 130 aa10.07□□□□□ -0.8
HMGCS1-206ENST00000511774 URB1-AS1Q96HZ7 61 aa10.06□□□□□ -0.8
HMGCS1-206ENST00000511774 SMCO4Q9NRQ5 59 aa10.04□□□□□ -0.8
HMGCS1-206ENST00000511774 PMCHL1Q16048 86 aa10.03□□□□□ -0.8
HMGCS1-206ENST00000511774 BAGE3Q86Y29 109 aa10.03□□□□□ -0.8
HMGCS1-206ENST00000511774 TMEM223A0PJW6 202 aa10.02□□□□□ -0.81
HMGCS1-206ENST00000511774 ATP6V1G1O75348 118 aa10.01□□□□□ -0.81
HMGCS1-206ENST00000511774 DDTP30046 118 aa10.01□□□□□ -0.81
HMGCS1-206ENST00000511774 RPL37P61927 97 aaKnown RBP10.01□□□□□ -0.81
HMGCS1-206ENST00000511774 MEIG1Q5JSS6 88 aa10.01□□□□□ -0.81
HMGCS1-206ENST00000511774 KRTAP9-8Q9BYQ0 159 aa10.01□□□□□ -0.81
HMGCS1-206ENST00000511774 LIMD2Q9BT23 127 aa10□□□□□ -0.81
HMGCS1-206ENST00000511774 SYNE2Q8WXH0 6885 aaKnown RBP9.99□□□□□ -0.81
HMGCS1-206ENST00000511774 S100A12P80511 92 aa9.99□□□□□ -0.81
HMGCS1-206ENST00000511774 HBDP02042 147 aa9.96□□□□□ -0.82
HMGCS1-206ENST00000511774 CHTOPQ9Y3Y2 248 aaKnown RBP9.96□□□□□ -0.82
HMGCS1-206ENST00000511774 LOC107984156A0A0G2JMH3 177 aa9.94□□□□□ -0.82
HMGCS1-206ENST00000511774 TRBV10-2A0A0K0K1G8 114 aa9.94□□□□□ -0.82
HMGCS1-206ENST00000511774 FABP9Q0Z7S8 132 aa9.94□□□□□ -0.82
HMGCS1-206ENST00000511774 ARL17AQ8IVW1 177 aa9.94□□□□□ -0.82
HMGCS1-206ENST00000511774 KRTAP19-1Q8IUB9 90 aa9.93□□□□□ -0.82
HMGCS1-206ENST00000511774 MACF1Q9UPN3 7388 aaKnown RBP9.93□□□□□ -0.82
HMGCS1-206ENST00000511774 HERV-K104P63124 156 aa9.92□□□□□ -0.82
HMGCS1-206ENST00000511774 H7C2G1 150 aa9.91□□□□□ -0.82
HMGCS1-206ENST00000511774 LINC00614P0C842 121 aa9.91□□□□□ -0.82
HMGCS1-206ENST00000511774 SPRR1BP22528 89 aa9.91□□□□□ -0.82
HMGCS1-206ENST00000511774 C1orf195Q5TG92 126 aa9.91□□□□□ -0.82
HMGCS1-206ENST00000511774 C18orf32Q8TCD1 76 aa9.91□□□□□ -0.82
HMGCS1-206ENST00000511774 CFC1P0CG37 223 aa9.9□□□□□ -0.82
HMGCS1-206ENST00000511774 TSPEAR-AS2P59090 65 aa9.9□□□□□ -0.82
HMGCS1-206ENST00000511774 TRAV23DV6A0A075B6W5 121 aa9.89□□□□□ -0.83
HMGCS1-206ENST00000511774 JOSD1Q15040 202 aaPredicted RBP9.89□□□□□ -0.83
HMGCS1-206ENST00000511774 Q6Q795 121 aa9.88□□□□□ -0.83
HMGCS1-206ENST00000511774 RPS10P5Q9NQ39 176 aa9.88□□□□□ -0.83
HMGCS1-206ENST00000511774 SPANXB1Q9NS25 103 aaPredicted RBP9.88□□□□□ -0.83
HMGCS1-206ENST00000511774 ZNF73O43830 326 aaPredicted RBP9.87□□□□□ -0.83
HMGCS1-206ENST00000511774 EIF4EBP3O60516 100 aaPredicted RBP9.87□□□□□ -0.83
HMGCS1-206ENST00000511774 S100A7L2Q5SY68 101 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms