RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 IGLV5-37A0A075B6J1 123 aa9.29□□□□□ -0.92
RNF4-210ENST00000508235 HIST1H2BLQ99880 126 aa9.29□□□□□ -0.92
RNF4-210ENST00000508235 PCLOQ9Y6V0 5065 aa9.28□□□□□ -0.92
RNF4-210ENST00000508235 A0A0U1RRA0 63 aa9.28□□□□□ -0.92
RNF4-210ENST00000508235 SMIM13P0DJ93 91 aa9.28□□□□□ -0.92
RNF4-210ENST00000508235 C1orf137Q5JT78 98 aa9.27□□□□□ -0.93
RNF4-210ENST00000508235 HNRNPA3P51991 378 aaKnown RBP9.26□□□□□ -0.93
RNF4-210ENST00000508235 SNRPEP62304 92 aaKnown RBP9.26□□□□□ -0.93
RNF4-210ENST00000508235 SPINK6Q6UWN8 80 aa9.26□□□□□ -0.93
RNF4-210ENST00000508235 MIR7-3HGQ8N6C7 128 aa9.26□□□□□ -0.93
RNF4-210ENST00000508235 VPREB1P12018 145 aa9.25□□□□□ -0.93
RNF4-210ENST00000508235 FAT1Q14517 4588 aa9.25□□□□□ -0.93
RNF4-210ENST00000508235 SRRM2Q9UQ35 2752 aaKnown RBP9.24□□□□□ -0.93
RNF4-210ENST00000508235 ABCA13Q86UQ4 5058 aa9.24□□□□□ -0.93
RNF4-210ENST00000508235 C5orf52A6NGY3 159 aa9.24□□□□□ -0.93
RNF4-210ENST00000508235 LINC00167Q96N53 147 aa9.24□□□□□ -0.93
RNF4-210ENST00000508235 KRTAP29-1A8MX34 341 aaPredicted RBP9.23□□□□□ -0.93
RNF4-210ENST00000508235 OXTP01178 125 aa9.23□□□□□ -0.93
RNF4-210ENST00000508235 IGLV7-43P04211 117 aa9.23□□□□□ -0.93
RNF4-210ENST00000508235 KRTAP11-1Q8IUC1 163 aa9.23□□□□□ -0.93
RNF4-210ENST00000508235 A0A0J9YXY3 114 aa9.22□□□□□ -0.93
RNF4-210ENST00000508235 SRSF9Q13242 221 aaKnown RBP eCLIP9.22□□□□□ -0.93
RNF4-210ENST00000508235 MIEN1Q9BRT3 115 aa9.22□□□□□ -0.93
RNF4-210ENST00000508235 GAGE10A6NGK3 116 aa9.21□□□□□ -0.94
RNF4-210ENST00000508235 RPL37AP8A6NKH3 93 aa9.21□□□□□ -0.94
RNF4-210ENST00000508235 ZNF815PA8K554 130 aa9.21□□□□□ -0.94
RNF4-210ENST00000508235 BOD1L2Q8IYS8 172 aa9.21□□□□□ -0.94
RNF4-210ENST00000508235 ATOH7Q8N100 152 aa9.21□□□□□ -0.94
RNF4-210ENST00000508235 IGKV2D-26A0A0A0MRZ7 120 aa9.2□□□□□ -0.94
RNF4-210ENST00000508235 LOC107984156A0A0G2JMH3 177 aa9.2□□□□□ -0.94
RNF4-210ENST00000508235 REG3GQ6UW15 175 aa9.2□□□□□ -0.94
RNF4-210ENST00000508235 ARL17AQ8IVW1 177 aa9.2□□□□□ -0.94
RNF4-210ENST00000508235 FLG2Q5D862 2391 aaPredicted RBP9.2□□□□□ -0.94
RNF4-210ENST00000508235 HSBP1L1C9JCN9 74 aa9.19□□□□□ -0.94
RNF4-210ENST00000508235 J3QL48 77 aa9.19□□□□□ -0.94
RNF4-210ENST00000508235 M0R378 163 aa9.19□□□□□ -0.94
RNF4-210ENST00000508235 TIMM17BO60830 172 aa9.19□□□□□ -0.94
RNF4-210ENST00000508235 IGLV1-50A0A075B6I6 118 aa9.18□□□□□ -0.94
RNF4-210ENST00000508235 DAND5Q8N907 189 aa9.18□□□□□ -0.94
RNF4-210ENST00000508235 DIRC1Q969H9 104 aa9.18□□□□□ -0.94
RNF4-210ENST00000508235 IGKV2-28A0A075B6P5 120 aa9.17□□□□□ -0.94
RNF4-210ENST00000508235 BCE1O60756 84 aa9.17□□□□□ -0.94
RNF4-210ENST00000508235 IGKV2D-28P01615 120 aa9.17□□□□□ -0.94
RNF4-210ENST00000508235 ANKRD39Q53RE8 183 aa9.17□□□□□ -0.94
RNF4-210ENST00000508235 Q8NDZ9 215 aa9.17□□□□□ -0.94
RNF4-210ENST00000508235 SCGB1D1O95968 90 aa9.16□□□□□ -0.94
RNF4-210ENST00000508235 SCGB1D4Q6XE38 83 aa9.16□□□□□ -0.94
RNF4-210ENST00000508235 VPS13BQ7Z7G8 4022 aa9.16□□□□□ -0.94
RNF4-210ENST00000508235 ZNF861PO60384 105 aa9.15□□□□□ -0.94
RNF4-210ENST00000508235 NDUFC2O95298 119 aa9.15□□□□□ -0.94
RNF4-210ENST00000508235 RPL28P46779 137 aaKnown RBP9.15□□□□□ -0.94
RNF4-210ENST00000508235 S100A12P80511 92 aa9.15□□□□□ -0.94
RNF4-210ENST00000508235 ADAMTSL4-AS1Q5T5F5 129 aa9.15□□□□□ -0.94
RNF4-210ENST00000508235 TTTY13Q9BZ97 58 aa9.15□□□□□ -0.94
RNF4-210ENST00000508235 H0Y9J4 135 aa9.14□□□□□ -0.95
RNF4-210ENST00000508235 NCR3O14931 201 aa9.14□□□□□ -0.95
RNF4-210ENST00000508235 TRBV10-2A0A0K0K1G8 114 aa9.13□□□□□ -0.95
RNF4-210ENST00000508235 TMEM238C9JI98 176 aa9.13□□□□□ -0.95
RNF4-210ENST00000508235 COPS9Q8WXC6 57 aa9.13□□□□□ -0.95
RNF4-210ENST00000508235 LITAFQ99732 161 aa9.13□□□□□ -0.95
RNF4-210ENST00000508235 SPANXB1Q9NS25 103 aaPredicted RBP9.13□□□□□ -0.95
RNF4-210ENST00000508235 UBE2AP49459 152 aa9.12□□□□□ -0.95
RNF4-210ENST00000508235 LINC01600Q96MT4 127 aa9.12□□□□□ -0.95
RNF4-210ENST00000508235 TMEM126AQ9H061 195 aa9.12□□□□□ -0.95
RNF4-210ENST00000508235 NPC2P61916 151 aa9.11□□□□□ -0.95
RNF4-210ENST00000508235 PCP2Q8IVA1 136 aa9.11□□□□□ -0.95
RNF4-210ENST00000508235 LINC00308Q8TCZ7 52 aa9.11□□□□□ -0.95
RNF4-210ENST00000508235 PRYO14603 147 aa9.1□□□□□ -0.95
RNF4-210ENST00000508235 SOSTDC1Q6X4U4 206 aa9.1□□□□□ -0.95
RNF4-210ENST00000508235 Q6ZVH6 145 aa9.1□□□□□ -0.95
RNF4-210ENST00000508235 FAM19A1Q7Z5A9 133 aa9.1□□□□□ -0.95
RNF4-210ENST00000508235 SPANXDQ9BXN6 97 aa9.1□□□□□ -0.95
RNF4-210ENST00000508235 SPANXCQ9NY87 97 aa9.1□□□□□ -0.95
RNF4-210ENST00000508235 S100A7L2Q5SY68 101 aa9.09□□□□□ -0.95
RNF4-210ENST00000508235 KCNQ1DNQ9H478 68 aa9.09□□□□□ -0.95
RNF4-210ENST00000508235 CBY1Q9Y3M2 126 aa9.09□□□□□ -0.95
RNF4-210ENST00000508235 TRBV10-3A0A0K0K1G6 114 aa9.08□□□□□ -0.96
RNF4-210ENST00000508235 IFITM1P13164 125 aa9.08□□□□□ -0.96
RNF4-210ENST00000508235 DDTP30046 118 aa9.08□□□□□ -0.96
RNF4-210ENST00000508235 PPDPFQ9H3Y8 114 aa9.08□□□□□ -0.96
RNF4-210ENST00000508235 EIF4EBP3O60516 100 aaPredicted RBP9.06□□□□□ -0.96
RNF4-210ENST00000508235 KRTAP13-1Q8IUC0 172 aa9.06□□□□□ -0.96
RNF4-210ENST00000508235 LINC00518Q8N0U6 118 aa9.06□□□□□ -0.96
RNF4-210ENST00000508235 TMA7Q9Y2S6 64 aaKnown RBP9.06□□□□□ -0.96
RNF4-210ENST00000508235 SPRR1AP35321 89 aa9.05□□□□□ -0.96
RNF4-210ENST00000508235 PRLHP81277 87 aa9.05□□□□□ -0.96
RNF4-210ENST00000508235 JOSD1Q15040 202 aaPredicted RBP9.05□□□□□ -0.96
RNF4-210ENST00000508235 LINC00337Q8N6G1 96 aa9.05□□□□□ -0.96
RNF4-210ENST00000508235 IGLV6-57P01721 117 aa9.04□□□□□ -0.96
RNF4-210ENST00000508235 MT1HL1P0DM35 61 aa9.04□□□□□ -0.96
RNF4-210ENST00000508235 ETDCA0A1B0GVM5 59 aa9.03□□□□□ -0.96
RNF4-210ENST00000508235 COX8AP10176 69 aa9.02□□□□□ -0.97
RNF4-210ENST00000508235 OR13C6PQ8NH95 151 aa9.02□□□□□ -0.97
RNF4-210ENST00000508235 VAMP8Q9BV40 100 aa9.02□□□□□ -0.97
RNF4-210ENST00000508235 DMBT1Q9UGM3 2413 aaPredicted RBP9.02□□□□□ -0.97
RNF4-210ENST00000508235 TRAV23DV6A0A075B6W5 121 aa9.01□□□□□ -0.97
RNF4-210ENST00000508235 KRTAP1-4P0C5Y4 121 aa9.01□□□□□ -0.97
RNF4-210ENST00000508235 KRTAP4-16G5E9R7 235 aaPredicted RBP9□□□□□ -0.97
RNF4-210ENST00000508235 DLEU1O43261 78 aa9□□□□□ -0.97
RNF4-210ENST00000508235 RPL13AP40429 203 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms