RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 C12orf57Q99622 126 aa-0.62□□□□□ -2.51
LSM6-205ENST00000507449 DMXL2Q8TDJ6 3036 aa-0.62□□□□□ -2.51
LSM6-205ENST00000507449 PKD1P98161 4303 aa-0.62□□□□□ -2.51
LSM6-205ENST00000507449 MYO15AQ9UKN7 3530 aa-0.63□□□□□ -2.51
LSM6-205ENST00000507449 EYSQ5T1H1 3165 aa-0.63□□□□□ -2.51
LSM6-205ENST00000507449 DNAH1Q9P2D7 4330 aa-0.63□□□□□ -2.51
LSM6-205ENST00000507449 DNAH5Q8TE73 4624 aa-0.63□□□□□ -2.51
LSM6-205ENST00000507449 CRYM-AS1A6NIL9 109 aa-0.63□□□□□ -2.51
LSM6-205ENST00000507449 M0R2T5 61 aa-0.63□□□□□ -2.51
LSM6-205ENST00000507449 SAA2P0DJI9 122 aaPredicted RBP-0.63□□□□□ -2.51
LSM6-205ENST00000507449 SPRR2EP22531 72 aa-0.63□□□□□ -2.51
LSM6-205ENST00000507449 LINC00846Q9NV44 126 aa-0.63□□□□□ -2.51
LSM6-205ENST00000507449 MAPKBP1O60336 1514 aa-0.64□□□□□ -2.51
LSM6-205ENST00000507449 TOP2BQ02880 1626 aa-0.64□□□□□ -2.51
LSM6-205ENST00000507449 SPHKAPQ2M3C7 1700 aa-0.64□□□□□ -2.51
LSM6-205ENST00000507449 TEX15Q9BXT5 2789 aa-0.64□□□□□ -2.51
LSM6-205ENST00000507449 NBASA2RRP1 2371 aa-0.64□□□□□ -2.51
LSM6-205ENST00000507449 COL4A6Q14031 1691 aa-0.64□□□□□ -2.51
LSM6-205ENST00000507449 EIF4G3O43432 1585 aaKnown RBP-0.64□□□□□ -2.51
LSM6-205ENST00000507449 SETBP1Q9Y6X0 1596 aa-0.64□□□□□ -2.51
LSM6-205ENST00000507449 hADV29S1A0JD25 119 aa-0.64□□□□□ -2.51
LSM6-205ENST00000507449 KRTAP6-2Q3LI66 62 aa-0.64□□□□□ -2.51
LSM6-205ENST00000507449 NLRP1Q9C000 1473 aa-0.65□□□□□ -2.51
LSM6-205ENST00000507449 SPRR2AP35326 72 aa-0.65□□□□□ -2.51
LSM6-205ENST00000507449 CC2D2AQ9P2K1 1620 aa-0.65□□□□□ -2.51
LSM6-205ENST00000507449 SMG1Q96Q15 3661 aaKnown RBP-0.65□□□□□ -2.51
LSM6-205ENST00000507449 HTTP42858 3142 aa-0.65□□□□□ -2.51
LSM6-205ENST00000507449 KALRNO60229 2985 aa-0.66□□□□□ -2.51
LSM6-205ENST00000507449 TCHHQ07283 1943 aa-0.66□□□□□ -2.51
LSM6-205ENST00000507449 PLEKHH2Q8IVE3 1493 aa-0.66□□□□□ -2.51
LSM6-205ENST00000507449 SPG11Q96JI7 2443 aa-0.66□□□□□ -2.51
LSM6-205ENST00000507449 CFAP46Q8IYW2 2715 aa-0.66□□□□□ -2.52
LSM6-205ENST00000507449 A0A087WVE0 104 aa-0.66□□□□□ -2.52
LSM6-205ENST00000507449 MT1HL1P0DM35 61 aa-0.66□□□□□ -2.52
LSM6-205ENST00000507449 MRPS10P82664 201 aaKnown RBP-0.66□□□□□ -2.52
LSM6-205ENST00000507449 CMYA5Q8N3K9 4069 aa-0.66□□□□□ -2.52
LSM6-205ENST00000507449 MYO9AB2RTY4 2548 aa-0.66□□□□□ -2.52
LSM6-205ENST00000507449 RELNP78509 3460 aa-0.66□□□□□ -2.52
LSM6-205ENST00000507449 ZZEF1O43149 2961 aa-0.66□□□□□ -2.52
LSM6-205ENST00000507449 CEP295Q9C0D2 2601 aa-0.67□□□□□ -2.52
LSM6-205ENST00000507449 ZFHX4Q86UP3 3567 aa-0.67□□□□□ -2.52
LSM6-205ENST00000507449 SEC11AP67812 179 aa-0.67□□□□□ -2.52
LSM6-205ENST00000507449 HSD52Q0P140 79 aa-0.67□□□□□ -2.52
LSM6-205ENST00000507449 USMG5Q96IX5 58 aa-0.67□□□□□ -2.52
LSM6-205ENST00000507449 ABCC5O15440 1437 aa-0.67□□□□□ -2.52
LSM6-205ENST00000507449 DNAH11Q96DT5 4516 aa-0.67□□□□□ -2.52
LSM6-205ENST00000507449 NBEAQ8NFP9 2946 aa-0.68□□□□□ -2.52
LSM6-205ENST00000507449 CHD7Q9P2D1 2997 aa-0.68□□□□□ -2.52
LSM6-205ENST00000507449 TMEM262E9PQX1 116 aa-0.68□□□□□ -2.52
LSM6-205ENST00000507449 SYS1-DBNDD2H3BUS1 97 aa-0.68□□□□□ -2.52
LSM6-205ENST00000507449 COX8AP10176 69 aa-0.68□□□□□ -2.52
LSM6-205ENST00000507449 KRTDAPP60985 99 aa-0.68□□□□□ -2.52
LSM6-205ENST00000507449 GTF2H5Q6ZYL4 71 aa-0.68□□□□□ -2.52
LSM6-205ENST00000507449 XRN1Q8IZH2 1706 aaKnown RBP-0.68□□□□□ -2.52
LSM6-205ENST00000507449 BOD1L1Q8NFC6 3051 aa-0.68□□□□□ -2.52
LSM6-205ENST00000507449 DNAH17Q9UFH2 4485 aa-0.68□□□□□ -2.52
LSM6-205ENST00000507449 AKAP9Q99996 3911 aa-0.68□□□□□ -2.52
LSM6-205ENST00000507449 UTP20O75691 2785 aaKnown RBP-0.68□□□□□ -2.52
LSM6-205ENST00000507449 ACACBO00763 2458 aa-0.69□□□□□ -2.52
LSM6-205ENST00000507449 DNAH9Q9NYC9 4486 aa-0.69□□□□□ -2.52
LSM6-205ENST00000507449 C7orf77A4D0Y5 90 aa-0.69□□□□□ -2.52
LSM6-205ENST00000507449 CGREF1Q99674 301 aa-0.69□□□□□ -2.52
LSM6-205ENST00000507449 CRIPTQ9P021 101 aa-0.69□□□□□ -2.52
LSM6-205ENST00000507449 APLNQ9ULZ1 77 aa-0.69□□□□□ -2.52
LSM6-205ENST00000507449 SPENQ96T58 3664 aaKnown RBP-0.69□□□□□ -2.52
LSM6-205ENST00000507449 A0A0G2JMZ2 1700 aa-0.69□□□□□ -2.52
LSM6-205ENST00000507449 NUP188Q5SRE5 1749 aa-0.69□□□□□ -2.52
LSM6-205ENST00000507449 KNL1Q8NG31 2342 aa-0.7□□□□□ -2.52
LSM6-205ENST00000507449 DNAH7Q8WXX0 4024 aa-0.7□□□□□ -2.52
LSM6-205ENST00000507449 MT1BP07438 61 aa-0.7□□□□□ -2.52
LSM6-205ENST00000507449 VPS13BQ7Z7G8 4022 aa-0.7□□□□□ -2.52
LSM6-205ENST00000507449 IQSEC2Q5JU85 1478 aa-0.7□□□□□ -2.52
LSM6-205ENST00000507449 PDE4DIPQ5VU43 2346 aa-0.7□□□□□ -2.52
LSM6-205ENST00000507449 ADGRG4Q8IZF6 3080 aa-0.7□□□□□ -2.52
LSM6-205ENST00000507449 TLN1Q9Y490 2541 aaKnown RBP-0.71□□□□□ -2.52
LSM6-205ENST00000507449 FMN2Q9NZ56 1722 aa-0.71□□□□□ -2.52
LSM6-205ENST00000507449 A0A1B0GU69 56 aa-0.71□□□□□ -2.52
LSM6-205ENST00000507449 C20orf202A1L168 122 aa-0.71□□□□□ -2.52
LSM6-205ENST00000507449 CPSF4LA6NMK7 179 aaKnown RBP-0.71□□□□□ -2.52
LSM6-205ENST00000507449 ASIPP42127 132 aa-0.71□□□□□ -2.52
LSM6-205ENST00000507449 SPRR2FQ96RM1 72 aa-0.71□□□□□ -2.52
LSM6-205ENST00000507449 CHD1O14646 1710 aa-0.72□□□□□ -2.52
LSM6-205ENST00000507449 FAM135AQ9P2D6 1515 aa-0.72□□□□□ -2.52
LSM6-205ENST00000507449 A0A0G2JND7 137 aa-0.72□□□□□ -2.52
LSM6-205ENST00000507449 CACFD1Q9UGQ2 172 aa-0.72□□□□□ -2.52
LSM6-205ENST00000507449 TOPAZ1Q8N9V7 1692 aa-0.72□□□□□ -2.53
LSM6-205ENST00000507449 COL14A1Q05707 1796 aaKnown RBP-0.73□□□□□ -2.53
LSM6-205ENST00000507449 REV3LO60673 3130 aa-0.73□□□□□ -2.53
LSM6-205ENST00000507449 DNAH10Q8IVF4 4471 aa-0.73□□□□□ -2.53
LSM6-205ENST00000507449 DNAJC13O75165 2243 aa-0.73□□□□□ -2.53
LSM6-205ENST00000507449 DMXL1Q9Y485 3027 aa-0.73□□□□□ -2.53
LSM6-205ENST00000507449 ATMQ13315 3056 aa-0.73□□□□□ -2.53
LSM6-205ENST00000507449 MT1HP80294 61 aa-0.73□□□□□ -2.53
LSM6-205ENST00000507449 DEFB135Q30KP9 77 aa-0.73□□□□□ -2.53
LSM6-205ENST00000507449 C6orf201Q7Z4U5 140 aa-0.73□□□□□ -2.53
LSM6-205ENST00000507449 CSMD1Q96PZ7 3565 aa-0.73□□□□□ -2.53
LSM6-205ENST00000507449 ZFYVE16Q7Z3T8 1539 aa-0.74□□□□□ -2.53
LSM6-205ENST00000507449 TLN2Q9Y4G6 2542 aa-0.74□□□□□ -2.53
LSM6-205ENST00000507449 MT1XP80297 61 aa-0.74□□□□□ -2.53
LSM6-205ENST00000507449 DEFB107AQ8IZN7 70 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms