RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 IGKV2D-28P01615 120 aa8.11□□□□□ -1.11
HOXC6-203ENST00000504315 A0A087X002 238 aa8.1□□□□□ -1.11
HOXC6-203ENST00000504315 COLCA2A8K830 154 aa8.1□□□□□ -1.11
HOXC6-203ENST00000504315 SERF1AO75920 110 aa8.1□□□□□ -1.11
HOXC6-203ENST00000504315 LEPROTL1O95214 131 aa8.1□□□□□ -1.11
HOXC6-203ENST00000504315 UBE2AP49459 152 aa8.09□□□□□ -1.11
HOXC6-203ENST00000504315 LINC00158P58513 81 aa8.09□□□□□ -1.11
HOXC6-203ENST00000504315 HERV-K104P63124 156 aa8.08□□□□□ -1.12
HOXC6-203ENST00000504315 TMEM126AQ9H061 195 aa8.08□□□□□ -1.12
HOXC6-203ENST00000504315 TMEM238C9JI98 176 aa8.07□□□□□ -1.12
HOXC6-203ENST00000504315 M0R378 163 aa8.07□□□□□ -1.12
HOXC6-203ENST00000504315 SMIM13P0DJ93 91 aa8.06□□□□□ -1.12
HOXC6-203ENST00000504315 CRYGAP11844 174 aa8.06□□□□□ -1.12
HOXC6-203ENST00000504315 FAM229BQ4G0N7 80 aa8.06□□□□□ -1.12
HOXC6-203ENST00000504315 NDUFA12Q9UI09 145 aa8.06□□□□□ -1.12
HOXC6-203ENST00000504315 HSPB8Q9UJY1 196 aa8.06□□□□□ -1.12
HOXC6-203ENST00000504315 A0A0U1RRA0 63 aa8.05□□□□□ -1.12
HOXC6-203ENST00000504315 LINC00587B1AMM8 73 aa8.05□□□□□ -1.12
HOXC6-203ENST00000504315 H0Y8G0 127 aa8.05□□□□□ -1.12
HOXC6-203ENST00000504315 PLNP26678 52 aa8.05□□□□□ -1.12
HOXC6-203ENST00000504315 TSPEAR-AS2P59090 65 aa8.05□□□□□ -1.12
HOXC6-203ENST00000504315 PRLHP81277 87 aa8.05□□□□□ -1.12
HOXC6-203ENST00000504315 FAM19A1Q7Z5A9 133 aa8.05□□□□□ -1.12
HOXC6-203ENST00000504315 RNF213Q63HN8 5207 aa8.05□□□□□ -1.12
HOXC6-203ENST00000504315 LPAP08519 4548 aa8.04□□□□□ -1.12
HOXC6-203ENST00000504315 MYMXA0A1B0GTQ4 84 aa8.04□□□□□ -1.12
HOXC6-203ENST00000504315 MEIG1Q5JSS6 88 aa8.04□□□□□ -1.12
HOXC6-203ENST00000504315 MIR7-3HGQ8N6C7 128 aa8.04□□□□□ -1.12
HOXC6-203ENST00000504315 IGKV2D-26A0A0A0MRZ7 120 aa8.03□□□□□ -1.12
HOXC6-203ENST00000504315 LOC107984156A0A0G2JMH3 177 aa8.03□□□□□ -1.12
HOXC6-203ENST00000504315 LEPROTO15243 131 aa8.03□□□□□ -1.12
HOXC6-203ENST00000504315 KRTAP13-2Q52LG2 175 aa8.03□□□□□ -1.12
HOXC6-203ENST00000504315 ARL17AQ8IVW1 177 aa8.03□□□□□ -1.12
HOXC6-203ENST00000504315 TYMSOSQ8TAI1 123 aa8.03□□□□□ -1.12
HOXC6-203ENST00000504315 PLEKHB2Q96CS7 222 aa8.03□□□□□ -1.12
HOXC6-203ENST00000504315 ANAPC11Q9NYG5 84 aa8.03□□□□□ -1.12
HOXC6-203ENST00000504315 DPM2O94777 84 aa8.02□□□□□ -1.13
HOXC6-203ENST00000504315 FABP4P15090 132 aa8.02□□□□□ -1.13
HOXC6-203ENST00000504315 MAP1LC3CQ9BXW4 147 aa8.02□□□□□ -1.13
HOXC6-203ENST00000504315 J3QQQ9 107 aa8.01□□□□□ -1.13
HOXC6-203ENST00000504315 PRYO14603 147 aa8.01□□□□□ -1.13
HOXC6-203ENST00000504315 ATP6V1G1O75348 118 aa8.01□□□□□ -1.13
HOXC6-203ENST00000504315 IGKCP01834 107 aa8.01□□□□□ -1.13
HOXC6-203ENST00000504315 SPRR1AP35321 89 aa8.01□□□□□ -1.13
HOXC6-203ENST00000504315 BOD1L2Q8IYS8 172 aa8.01□□□□□ -1.13
HOXC6-203ENST00000504315 NMUP48645 174 aa8□□□□□ -1.13
HOXC6-203ENST00000504315 HERVK_113P61574 105 aa8□□□□□ -1.13
HOXC6-203ENST00000504315 KCNQ1DNQ9H478 68 aa8□□□□□ -1.13
HOXC6-203ENST00000504315 KRTAP4-16G5E9R7 235 aaPredicted RBP7.99□□□□□ -1.13
HOXC6-203ENST00000504315 PMCHL2Q9BQD1 86 aa7.99□□□□□ -1.13
HOXC6-203ENST00000504315 NCR3O14931 201 aa7.98□□□□□ -1.13
HOXC6-203ENST00000504315 HIST1H2BKO60814 126 aa7.98□□□□□ -1.13
HOXC6-203ENST00000504315 HIST1H2BJP06899 126 aa7.98□□□□□ -1.13
HOXC6-203ENST00000504315 HIST1H2BOP23527 126 aa7.98□□□□□ -1.13
HOXC6-203ENST00000504315 HIST1H2BBP33778 126 aa7.98□□□□□ -1.13
HOXC6-203ENST00000504315 HIST1H2BDP58876 126 aa7.98□□□□□ -1.13
HOXC6-203ENST00000504315 HIST1H2BCP62807 126 aa7.98□□□□□ -1.13
HOXC6-203ENST00000504315 HIST2H2BEQ16778 126 aa7.98□□□□□ -1.13
HOXC6-203ENST00000504315 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.98□□□□□ -1.13
HOXC6-203ENST00000504315 LINC00337Q8N6G1 96 aa7.98□□□□□ -1.13
HOXC6-203ENST00000504315 HIST1H2BHQ93079 126 aa7.98□□□□□ -1.13
HOXC6-203ENST00000504315 HIST1H2BNQ99877 126 aa7.98□□□□□ -1.13
HOXC6-203ENST00000504315 HIST1H2BMQ99879 126 aa7.98□□□□□ -1.13
HOXC6-203ENST00000504315 TRBV10-2A0A0K0K1G8 114 aa7.97□□□□□ -1.13
HOXC6-203ENST00000504315 CTAG1AP78358 180 aa7.97□□□□□ -1.13
HOXC6-203ENST00000504315 TRBV10-3A0A0K0K1G6 114 aa7.96□□□□□ -1.14
HOXC6-203ENST00000504315 E9PLD3 99 aa7.96□□□□□ -1.14
HOXC6-203ENST00000504315 TSPAN13O95857 204 aa7.96□□□□□ -1.14
HOXC6-203ENST00000504315 LGALS3P17931 250 aaKnown RBP7.96□□□□□ -1.14
HOXC6-203ENST00000504315 PRR4Q16378 134 aa7.96□□□□□ -1.14
HOXC6-203ENST00000504315 DAND5Q8N907 189 aa7.96□□□□□ -1.14
HOXC6-203ENST00000504315 HIGD2AQ9BW72 106 aa7.96□□□□□ -1.14
HOXC6-203ENST00000504315 SYS1-DBNDD2H3BUS1 97 aa7.95□□□□□ -1.14
HOXC6-203ENST00000504315 LINC00304Q8N9R0 145 aa7.95□□□□□ -1.14
HOXC6-203ENST00000504315 SPRR4Q96PI1 79 aa7.95□□□□□ -1.14
HOXC6-203ENST00000504315 NDUFC2O95298 119 aa7.94□□□□□ -1.14
HOXC6-203ENST00000504315 SPANXB1Q9NS25 103 aaPredicted RBP7.93□□□□□ -1.14
HOXC6-203ENST00000504315 ZNF706Q9Y5V0 76 aaPredicted RBP7.93□□□□□ -1.14
HOXC6-203ENST00000504315 A0A0J9YXY3 114 aa7.92□□□□□ -1.14
HOXC6-203ENST00000504315 ETDCA0A1B0GVM5 59 aa7.92□□□□□ -1.14
HOXC6-203ENST00000504315 COA6Q5JTJ3 125 aaKnown RBP7.92□□□□□ -1.14
HOXC6-203ENST00000504315 LINC01545Q5VT33 79 aa7.92□□□□□ -1.14
HOXC6-203ENST00000504315 C3orf22Q8N5N4 141 aa7.92□□□□□ -1.14
HOXC6-203ENST00000504315 SMCR5Q8TEV8 140 aa7.92□□□□□ -1.14
HOXC6-203ENST00000504315 DDTP30046 118 aa7.91□□□□□ -1.14
HOXC6-203ENST00000504315 S100A12P80511 92 aa7.91□□□□□ -1.14
HOXC6-203ENST00000504315 SOSTDC1Q6X4U4 206 aa7.91□□□□□ -1.14
HOXC6-203ENST00000504315 MIEN1Q9BRT3 115 aa7.91□□□□□ -1.14
HOXC6-203ENST00000504315 B5MCH6 92 aa7.9□□□□□ -1.14
HOXC6-203ENST00000504315 IGLV6-57P01721 117 aa7.9□□□□□ -1.14
HOXC6-203ENST00000504315 ADAMTSL4-AS1Q5T5F5 129 aa7.9□□□□□ -1.14
HOXC6-203ENST00000504315 PET117Q6UWS5 81 aa7.9□□□□□ -1.14
HOXC6-203ENST00000504315 EIF4EBP3O60516 100 aaPredicted RBP7.89□□□□□ -1.15
HOXC6-203ENST00000504315 LINC00483Q53H64 154 aa7.89□□□□□ -1.15
HOXC6-203ENST00000504315 Q6ZRX8 168 aa7.88□□□□□ -1.15
HOXC6-203ENST00000504315 LITAFQ99732 161 aa7.88□□□□□ -1.15
HOXC6-203ENST00000504315 TIMM17BO60830 172 aa7.87□□□□□ -1.15
HOXC6-203ENST00000504315 C3orf79P0CE67 100 aa7.87□□□□□ -1.15
HOXC6-203ENST00000504315 SPAG11AQ6PDA7 123 aa7.87□□□□□ -1.15
HOXC6-203ENST00000504315 S100A7L2Q5SY68 101 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms