RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 IGLV5-37A0A075B6J1 123 aa15.54■□□□□ 0.08
LSM6-202ENST00000502781 LINC00587B1AMM8 73 aa15.54■□□□□ 0.08
LSM6-202ENST00000502781 SMIM13P0DJ93 91 aa15.54■□□□□ 0.08
LSM6-202ENST00000502781 KRTAP11-1Q8IUC1 163 aa15.54■□□□□ 0.08
LSM6-202ENST00000502781 AKR1D1P51857 326 aa15.53■□□□□ 0.08
LSM6-202ENST00000502781 MEIG1Q5JSS6 88 aa15.53■□□□□ 0.08
LSM6-202ENST00000502781 PSORS1C2Q9UIG4 136 aa15.52■□□□□ 0.08
LSM6-202ENST00000502781 A0A0U1RRA0 63 aa15.51■□□□□ 0.07
LSM6-202ENST00000502781 IGKV2D-26A0A0A0MRZ7 120 aa15.5■□□□□ 0.07
LSM6-202ENST00000502781 MRPL55Q7Z7F7 128 aaKnown RBP15.49■□□□□ 0.07
LSM6-202ENST00000502781 MIR7-3HGQ8N6C7 128 aa15.49■□□□□ 0.07
LSM6-202ENST00000502781 VPREB1P12018 145 aa15.49■□□□□ 0.07
LSM6-202ENST00000502781 LBHQ53QV2 105 aaPredicted RBP15.49■□□□□ 0.07
LSM6-202ENST00000502781 ATOH7Q8N100 152 aa15.48■□□□□ 0.07
LSM6-202ENST00000502781 Q8NDZ9 215 aa15.48■□□□□ 0.07
LSM6-202ENST00000502781 PKHD1L1Q86WI1 4243 aa15.47■□□□□ 0.07
LSM6-202ENST00000502781 UBE2BP63146 152 aa15.47■□□□□ 0.07
LSM6-202ENST00000502781 MYCBP2O75592 4640 aa15.47■□□□□ 0.07
LSM6-202ENST00000502781 A0A0J9YXY3 114 aa15.46■□□□□ 0.07
LSM6-202ENST00000502781 ANKRD39Q53RE8 183 aa15.45■□□□□ 0.06
LSM6-202ENST00000502781 RPL24P83731 157 aaKnown RBP15.44■□□□□ 0.06
LSM6-202ENST00000502781 SRSF9Q13242 221 aaKnown RBP eCLIP15.44■□□□□ 0.06
LSM6-202ENST00000502781 NKAPP1Q8N9T2 125 aa15.44■□□□□ 0.06
LSM6-202ENST00000502781 LINC00167Q96N53 147 aa15.44■□□□□ 0.06
LSM6-202ENST00000502781 LOC107984156A0A0G2JMH3 177 aa15.43■□□□□ 0.06
LSM6-202ENST00000502781 C1orf137Q5JT78 98 aa15.43■□□□□ 0.06
LSM6-202ENST00000502781 ARL17AQ8IVW1 177 aa15.43■□□□□ 0.06
LSM6-202ENST00000502781 TTTY13Q9BZ97 58 aa15.43■□□□□ 0.06
LSM6-202ENST00000502781 DAND5Q8N907 189 aa15.41■□□□□ 0.06
LSM6-202ENST00000502781 ZNF815PA8K554 130 aa15.39■□□□□ 0.05
LSM6-202ENST00000502781 LITAFQ99732 161 aa15.39■□□□□ 0.05
LSM6-202ENST00000502781 GAGE10A6NGK3 116 aa15.38■□□□□ 0.05
LSM6-202ENST00000502781 IGLV7-43P04211 117 aa15.38■□□□□ 0.05
LSM6-202ENST00000502781 ADAMTSL4-AS1Q5T5F5 129 aa15.38■□□□□ 0.05
LSM6-202ENST00000502781 SPINK6Q6UWN8 80 aa15.38■□□□□ 0.05
LSM6-202ENST00000502781 BOD1L2Q8IYS8 172 aa15.38■□□□□ 0.05
LSM6-202ENST00000502781 RPL37AP8A6NKH3 93 aa15.36■□□□□ 0.05
LSM6-202ENST00000502781 TIMM17BO60830 172 aa15.36■□□□□ 0.05
LSM6-202ENST00000502781 IGLV1-50A0A075B6I6 118 aa15.35■□□□□ 0.05
LSM6-202ENST00000502781 LRP1Q07954 4544 aaKnown RBP15.34■□□□□ 0.05
LSM6-202ENST00000502781 KRTAP29-1A8MX34 341 aaPredicted RBP15.34■□□□□ 0.05
LSM6-202ENST00000502781 M0R378 163 aa15.33■□□□□ 0.04
LSM6-202ENST00000502781 SCGB1D1O95968 90 aa15.32■□□□□ 0.04
LSM6-202ENST00000502781 PCP2Q8IVA1 136 aa15.32■□□□□ 0.04
LSM6-202ENST00000502781 IGKV2-28A0A075B6P5 120 aa15.31■□□□□ 0.04
LSM6-202ENST00000502781 EIF4EBP3O60516 100 aaPredicted RBP15.31■□□□□ 0.04
LSM6-202ENST00000502781 OXTP01178 125 aa15.31■□□□□ 0.04
LSM6-202ENST00000502781 IGKV2D-28P01615 120 aa15.31■□□□□ 0.04
LSM6-202ENST00000502781 SOSTDC1Q6X4U4 206 aa15.31■□□□□ 0.04
LSM6-202ENST00000502781 FAT3Q8TDW7 4589 aa15.3■□□□□ 0.04
LSM6-202ENST00000502781 HSBP1L1C9JCN9 74 aa15.29■□□□□ 0.04
LSM6-202ENST00000502781 MIEN1Q9BRT3 115 aa15.29■□□□□ 0.04
LSM6-202ENST00000502781 BCE1O60756 84 aa15.28■□□□□ 0.04
LSM6-202ENST00000502781 NDUFC2O95298 119 aa15.28■□□□□ 0.04
LSM6-202ENST00000502781 DMBT1Q9UGM3 2413 aaPredicted RBP15.28■□□□□ 0.04
LSM6-202ENST00000502781 NCR3O14931 201 aa15.26■□□□□ 0.03
LSM6-202ENST00000502781 SCGB1D4Q6XE38 83 aa15.26■□□□□ 0.03
LSM6-202ENST00000502781 LINC00308Q8TCZ7 52 aa15.26■□□□□ 0.03
LSM6-202ENST00000502781 TMA7Q9Y2S6 64 aaKnown RBP15.26■□□□□ 0.03
LSM6-202ENST00000502781 TRBV10-2A0A0K0K1G8 114 aa15.25■□□□□ 0.03
LSM6-202ENST00000502781 ZNF861PO60384 105 aa15.25■□□□□ 0.03
LSM6-202ENST00000502781 NPC2P61916 151 aa15.24■□□□□ 0.03
LSM6-202ENST00000502781 DIRC1Q969H9 104 aa15.24■□□□□ 0.03
LSM6-202ENST00000502781 SPANXDQ9BXN6 97 aa15.24■□□□□ 0.03
LSM6-202ENST00000502781 TMEM126AQ9H061 195 aa15.24■□□□□ 0.03
LSM6-202ENST00000502781 SPANXB1Q9NS25 103 aaPredicted RBP15.24■□□□□ 0.03
LSM6-202ENST00000502781 SPANXCQ9NY87 97 aa15.24■□□□□ 0.03
LSM6-202ENST00000502781 TMEM238C9JI98 176 aa15.23■□□□□ 0.03
LSM6-202ENST00000502781 JOSD1Q15040 202 aaPredicted RBP15.23■□□□□ 0.03
LSM6-202ENST00000502781 REG3GQ6UW15 175 aa15.23■□□□□ 0.03
LSM6-202ENST00000502781 KRTAP13-1Q8IUC0 172 aa15.23■□□□□ 0.03
LSM6-202ENST00000502781 H0Y9J4 135 aa15.22■□□□□ 0.03
LSM6-202ENST00000502781 TRBV10-3A0A0K0K1G6 114 aa15.2■□□□□ 0.02
LSM6-202ENST00000502781 KCNQ1DNQ9H478 68 aa15.2■□□□□ 0.02
LSM6-202ENST00000502781 RPL28P46779 137 aaKnown RBP15.19■□□□□ 0.02
LSM6-202ENST00000502781 J3QL48 77 aa15.18■□□□□ 0.02
LSM6-202ENST00000502781 Q6ZVH6 145 aa15.18■□□□□ 0.02
LSM6-202ENST00000502781 LINC01600Q96MT4 127 aa15.18■□□□□ 0.02
LSM6-202ENST00000502781 PPDPFQ9H3Y8 114 aa15.18■□□□□ 0.02
LSM6-202ENST00000502781 PRYO14603 147 aa15.17■□□□□ 0.02
LSM6-202ENST00000502781 MT1HL1P0DM35 61 aa15.16■□□□□ 0.02
LSM6-202ENST00000502781 SPRR1AP35321 89 aa15.16■□□□□ 0.02
LSM6-202ENST00000502781 IGLV6-57P01721 117 aa15.15■□□□□ 0.02
LSM6-202ENST00000502781 IFITM1P13164 125 aa15.15■□□□□ 0.02
LSM6-202ENST00000502781 DDTP30046 118 aa15.15■□□□□ 0.02
LSM6-202ENST00000502781 UBE2AP49459 152 aa15.14■□□□□ 0.01
LSM6-202ENST00000502781 COX8AP10176 69 aa15.13■□□□□ 0.01
LSM6-202ENST00000502781 FAM19A1Q7Z5A9 133 aa15.13■□□□□ 0.01
LSM6-202ENST00000502781 KRTAP1-4P0C5Y4 121 aa15.12■□□□□ 0.01
LSM6-202ENST00000502781 COPS9Q8WXC6 57 aa15.12■□□□□ 0.01
LSM6-202ENST00000502781 KRTAP4-16G5E9R7 235 aaPredicted RBP15.11■□□□□ 0.01
LSM6-202ENST00000502781 PRLHP81277 87 aa15.11■□□□□ 0.01
LSM6-202ENST00000502781 PYY3Q5JQD4 70 aa15.11■□□□□ 0.01
LSM6-202ENST00000502781 DLEU1O43261 78 aa15.11■□□□□ 0.01
LSM6-202ENST00000502781 LINC00337Q8N6G1 96 aa15.11■□□□□ 0.01
LSM6-202ENST00000502781 S100A7L2Q5SY68 101 aa15.1■□□□□ 0.01
LSM6-202ENST00000502781 VAMP8Q9BV40 100 aa15.1■□□□□ 0.01
LSM6-202ENST00000502781 PAM16Q9Y3D7 125 aa15.1■□□□□ 0.01
LSM6-202ENST00000502781 SPATA45Q537H7 98 aa15.09■□□□□ 0.01
LSM6-202ENST00000502781 MUSTN1Q8IVN3 82 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms