RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 C2orf91Q6ZV80 131 aa3.63□□□□□ -1.83
PTPN20-212ENST00000502254 CARD19Q96LW7 228 aa3.63□□□□□ -1.83
PTPN20-212ENST00000502254 ALMS1Q8TCU4 4167 aa3.63□□□□□ -1.83
PTPN20-212ENST00000502254 DNAH1Q9P2D7 4330 aa3.63□□□□□ -1.83
PTPN20-212ENST00000502254 A0A087WTM6 91 aa3.62□□□□□ -1.83
PTPN20-212ENST00000502254 F8WDY8 70 aa3.62□□□□□ -1.83
PTPN20-212ENST00000502254 RTL8CO15255 209 aa3.62□□□□□ -1.83
PTPN20-212ENST00000502254 NPC2P61916 151 aa3.62□□□□□ -1.83
PTPN20-212ENST00000502254 CTAG1AP78358 180 aa3.62□□□□□ -1.83
PTPN20-212ENST00000502254 SRSF9Q13242 221 aaKnown RBP eCLIP3.62□□□□□ -1.83
PTPN20-212ENST00000502254 CIRBPQ14011 172 aaKnown RBP3.62□□□□□ -1.83
PTPN20-212ENST00000502254 ADAMTSL4-AS1Q5T5F5 129 aa3.62□□□□□ -1.83
PTPN20-212ENST00000502254 SFTA2Q6UW10 78 aa3.62□□□□□ -1.83
PTPN20-212ENST00000502254 DAND5Q8N907 189 aa3.62□□□□□ -1.83
PTPN20-212ENST00000502254 HIST1H4GQ99525 98 aa3.62□□□□□ -1.83
PTPN20-212ENST00000502254 C6orf48Q9UBA6 75 aa3.62□□□□□ -1.83
PTPN20-212ENST00000502254 ERG28Q9UKR5 140 aa3.62□□□□□ -1.83
PTPN20-212ENST00000502254 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.61□□□□□ -1.83
PTPN20-212ENST00000502254 IGLV9-49A0A0B4J1Y8 123 aa3.61□□□□□ -1.83
PTPN20-212ENST00000502254 TRBV30A0A0K0K1B3 111 aa3.61□□□□□ -1.83
PTPN20-212ENST00000502254 LINC00587B1AMM8 73 aa3.61□□□□□ -1.83
PTPN20-212ENST00000502254 TMEM238C9JI98 176 aa3.61□□□□□ -1.83
PTPN20-212ENST00000502254 DDTP30046 118 aa3.61□□□□□ -1.83
PTPN20-212ENST00000502254 FUSP35637 526 aaKnown RBP eCLIP3.61□□□□□ -1.83
PTPN20-212ENST00000502254 MIR7-3HGQ8N6C7 128 aa3.61□□□□□ -1.83
PTPN20-212ENST00000502254 Q8N814 137 aa3.61□□□□□ -1.83
PTPN20-212ENST00000502254 LYSTQ99698 3801 aa3.61□□□□□ -1.83
PTPN20-212ENST00000502254 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
PTPN20-212ENST00000502254 HIGD1BQ9P298 99 aa3.61□□□□□ -1.83
PTPN20-212ENST00000502254 TENM2Q9NT68 2774 aa3.61□□□□□ -1.83
PTPN20-212ENST00000502254 TIMM17BO60830 172 aa3.6□□□□□ -1.83
PTPN20-212ENST00000502254 HINT1P49773 126 aaPredicted RBP3.6□□□□□ -1.83
PTPN20-212ENST00000502254 RPL18AQ02543 176 aaKnown RBP3.6□□□□□ -1.83
PTPN20-212ENST00000502254 HSD52Q0P140 79 aa3.6□□□□□ -1.83
PTPN20-212ENST00000502254 LINC01620Q4KN68 170 aa3.6□□□□□ -1.83
PTPN20-212ENST00000502254 MUSTN1Q8IVN3 82 aa3.6□□□□□ -1.83
PTPN20-212ENST00000502254 LITAFQ99732 161 aa3.6□□□□□ -1.83
PTPN20-212ENST00000502254 HYDINQ4G0P3 5121 aa3.59□□□□□ -1.83
PTPN20-212ENST00000502254 CNBPP62633 177 aaKnown RBP3.59□□□□□ -1.83
PTPN20-212ENST00000502254 COX17Q14061 63 aa3.59□□□□□ -1.83
PTPN20-212ENST00000502254 BATFQ16520 125 aa3.59□□□□□ -1.83
PTPN20-212ENST00000502254 SMIM29Q86T20 159 aa3.59□□□□□ -1.83
PTPN20-212ENST00000502254 LINC00308Q8TCZ7 52 aa3.59□□□□□ -1.83
PTPN20-212ENST00000502254 SPANXDQ9BXN6 97 aa3.59□□□□□ -1.83
PTPN20-212ENST00000502254 KRTAP4-5Q9BYR2 181 aa3.59□□□□□ -1.83
PTPN20-212ENST00000502254 XAGE1AQ9HD64 81 aa3.59□□□□□ -1.83
PTPN20-212ENST00000502254 SPANXB1Q9NS25 103 aaPredicted RBP3.59□□□□□ -1.83
PTPN20-212ENST00000502254 SPANXCQ9NY87 97 aa3.59□□□□□ -1.83
PTPN20-212ENST00000502254 SACSQ9NZJ4 4579 aa3.59□□□□□ -1.84
PTPN20-212ENST00000502254 RYR2Q92736 4967 aa3.59□□□□□ -1.84
PTPN20-212ENST00000502254 DNAH10Q8IVF4 4471 aa3.58□□□□□ -1.84
PTPN20-212ENST00000502254 LOC107984640A0A0U1RRK4 108 aa3.58□□□□□ -1.84
PTPN20-212ENST00000502254 NDUFC2-KCTD14E9PQ53 114 aa3.58□□□□□ -1.84
PTPN20-212ENST00000502254 TAL2Q16559 108 aa3.58□□□□□ -1.84
PTPN20-212ENST00000502254 SOSTDC1Q6X4U4 206 aa3.58□□□□□ -1.84
PTPN20-212ENST00000502254 Q6ZRP5 223 aa3.58□□□□□ -1.84
PTPN20-212ENST00000502254 Q6ZVH6 145 aa3.58□□□□□ -1.84
PTPN20-212ENST00000502254 CEND1Q8N111 149 aa3.58□□□□□ -1.84
PTPN20-212ENST00000502254 SND1-IT1Q9HBX3 110 aa3.58□□□□□ -1.84
PTPN20-212ENST00000502254 IGKV2-24A0A0C4DH68 120 aa3.57□□□□□ -1.84
PTPN20-212ENST00000502254 M0R143 59 aa3.57□□□□□ -1.84
PTPN20-212ENST00000502254 TLX1NBP0CAT3 122 aa3.57□□□□□ -1.84
PTPN20-212ENST00000502254 IFITM1P13164 125 aa3.57□□□□□ -1.84
PTPN20-212ENST00000502254 FXYD2P54710 66 aa3.57□□□□□ -1.84
PTPN20-212ENST00000502254 BVES-AS1Q5T3Y7 98 aa3.57□□□□□ -1.84
PTPN20-212ENST00000502254 LINC00336Q6ZUF6 198 aa3.57□□□□□ -1.84
PTPN20-212ENST00000502254 C9orf163Q8N9P6 203 aa3.57□□□□□ -1.84
PTPN20-212ENST00000502254 COPS9Q8WXC6 57 aa3.57□□□□□ -1.84
PTPN20-212ENST00000502254 DPH3Q96FX2 82 aa3.57□□□□□ -1.84
PTPN20-212ENST00000502254 DNAH6Q9C0G6 4158 aa3.56□□□□□ -1.84
PTPN20-212ENST00000502254 IGKV2D-30A0A075B6S6 120 aa3.56□□□□□ -1.84
PTPN20-212ENST00000502254 A0A096LNI7 61 aa3.56□□□□□ -1.84
PTPN20-212ENST00000502254 NCR3O14931 201 aa3.56□□□□□ -1.84
PTPN20-212ENST00000502254 CHTF8P0CG12 524 aa3.56□□□□□ -1.84
PTPN20-212ENST00000502254 PRR3P79522 188 aaKnown RBP3.56□□□□□ -1.84
PTPN20-212ENST00000502254 C9orf129Q5T035 196 aaKnown RBP3.56□□□□□ -1.84
PTPN20-212ENST00000502254 SDIM1Q6ZPB5 146 aa3.56□□□□□ -1.84
PTPN20-212ENST00000502254 NHP2Q9NX24 153 aaKnown RBP3.56□□□□□ -1.84
PTPN20-212ENST00000502254 PKIGQ9Y2B9 76 aa3.56□□□□□ -1.84
PTPN20-212ENST00000502254 KMT2AQ03164 3969 aa3.56□□□□□ -1.84
PTPN20-212ENST00000502254 DNAH2Q9P225 4427 aa3.56□□□□□ -1.84
PTPN20-212ENST00000502254 C16orf90A8MZG2 172 aa3.55□□□□□ -1.84
PTPN20-212ENST00000502254 CDK2AP2O75956 126 aa3.55□□□□□ -1.84
PTPN20-212ENST00000502254 FAM19A5Q7Z5A7 132 aaPredicted RBP3.55□□□□□ -1.84
PTPN20-212ENST00000502254 Q8NDZ9 215 aa3.55□□□□□ -1.84
PTPN20-212ENST00000502254 RAB37Q96AX2 223 aa3.55□□□□□ -1.84
PTPN20-212ENST00000502254 SNHG12Q9BXW3 62 aa3.55□□□□□ -1.84
PTPN20-212ENST00000502254 RYR3Q15413 4870 aa3.55□□□□□ -1.84
PTPN20-212ENST00000502254 DNAH17Q9UFH2 4485 aa3.54□□□□□ -1.84
PTPN20-212ENST00000502254 LOC107984156A0A0G2JMH3 177 aa3.54□□□□□ -1.84
PTPN20-212ENST00000502254 FAM168BA1KXE4 195 aa3.54□□□□□ -1.84
PTPN20-212ENST00000502254 A6NDN8 102 aa3.54□□□□□ -1.84
PTPN20-212ENST00000502254 H7C2G1 150 aa3.54□□□□□ -1.84
PTPN20-212ENST00000502254 K7ERJ3 54 aa3.54□□□□□ -1.84
PTPN20-212ENST00000502254 CFC1BP0CG36 223 aa3.54□□□□□ -1.84
PTPN20-212ENST00000502254 CFC1P0CG37 223 aa3.54□□□□□ -1.84
PTPN20-212ENST00000502254 ARL17AQ8IVW1 177 aa3.54□□□□□ -1.84
PTPN20-212ENST00000502254 NKAPP1Q8N9T2 125 aa3.54□□□□□ -1.84
PTPN20-212ENST00000502254 OR13C6PQ8NH95 151 aa3.54□□□□□ -1.84
PTPN20-212ENST00000502254 KMT2CQ8NEZ4 4911 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms