RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 IGLV9-49A0A0B4J1Y8 123 aa10.54□□□□□ -0.72
C4A-259ENST00000498271 A0A087WSZ3 146 aa10.54□□□□□ -0.72
C4A-259ENST00000498271 IGHV3OR16-9A0A0B4J2B5 98 aa10.54□□□□□ -0.72
C4A-259ENST00000498271 SMIM29Q86T20 159 aa10.54□□□□□ -0.72
C4A-259ENST00000498271 PCOTHQ58A44 107 aa10.54□□□□□ -0.72
C4A-259ENST00000498271 C1orf64Q8NEQ6 169 aa10.54□□□□□ -0.72
C4A-259ENST00000498271 Q6ZQT0 140 aa10.53□□□□□ -0.72
C4A-259ENST00000498271 Q9BRP9 147 aa10.53□□□□□ -0.72
C4A-259ENST00000498271 ERC2-IT1O76042 136 aa10.52□□□□□ -0.72
C4A-259ENST00000498271 SETD2Q9BYW2 2564 aaPredicted RBP10.52□□□□□ -0.72
C4A-259ENST00000498271 FASNP49327 2511 aaKnown RBP10.52□□□□□ -0.72
C4A-259ENST00000498271 COL27A1Q8IZC6 1860 aaPredicted RBP10.52□□□□□ -0.73
C4A-259ENST00000498271 C6orf223Q8N319 242 aa10.51□□□□□ -0.73
C4A-259ENST00000498271 C11orf72Q8NBR9 251 aa10.5□□□□□ -0.73
C4A-259ENST00000498271 TP53AIP1Q9HCN2 124 aa10.5□□□□□ -0.73
C4A-259ENST00000498271 IGLV5-52A0A0A0MRZ9 124 aa10.49□□□□□ -0.73
C4A-259ENST00000498271 IGHV6-1A0A0B4J1U7 121 aa10.49□□□□□ -0.73
C4A-259ENST00000498271 RANBP2P49792 3224 aaKnown RBP10.49□□□□□ -0.73
C4A-259ENST00000498271 A8MTW9 85 aa10.48□□□□□ -0.73
C4A-259ENST00000498271 WWC2-AS2Q96NR7 200 aa10.47□□□□□ -0.73
C4A-259ENST00000498271 LITAFQ99732 161 aa10.46□□□□□ -0.73
C4A-259ENST00000498271 MKI67P46013 3256 aaKnown RBP10.46□□□□□ -0.74
C4A-259ENST00000498271 SMCR5Q8TEV8 140 aa10.45□□□□□ -0.74
C4A-259ENST00000498271 KLK9Q2XQG4 91 aa10.44□□□□□ -0.74
C4A-259ENST00000498271 ELOF1P60002 83 aaKnown RBP10.44□□□□□ -0.74
C4A-259ENST00000498271 KIAA0087Q14695 138 aa10.44□□□□□ -0.74
C4A-259ENST00000498271 FHL3Q13643 280 aa10.43□□□□□ -0.74
C4A-259ENST00000498271 FN1P02751 2386 aaKnown RBP10.42□□□□□ -0.74
C4A-259ENST00000498271 TM2D3Q9BRN9 247 aa10.42□□□□□ -0.74
C4A-259ENST00000498271 Q6ZRU5 148 aa10.42□□□□□ -0.74
C4A-259ENST00000498271 BRCA2P51587 3418 aa10.42□□□□□ -0.74
C4A-259ENST00000498271 FAM229AH3BQW9 127 aa10.41□□□□□ -0.74
C4A-259ENST00000498271 POLQO75417 2590 aa10.41□□□□□ -0.74
C4A-259ENST00000498271 CYP4F30PQ9H0H9 118 aa10.41□□□□□ -0.74
C4A-259ENST00000498271 SERTAD4-AS1Q5TG53 156 aa10.4□□□□□ -0.74
C4A-259ENST00000498271 Q6ZTC4 211 aa10.4□□□□□ -0.74
C4A-259ENST00000498271 SPAG11AQ6PDA7 123 aa10.4□□□□□ -0.74
C4A-259ENST00000498271 LYPD5Q6UWN5 251 aa10.4□□□□□ -0.74
C4A-259ENST00000498271 KLKP1Q107X0 134 aa10.4□□□□□ -0.75
C4A-259ENST00000498271 LAMA3Q16787 3333 aa10.39□□□□□ -0.75
C4A-259ENST00000498271 A0A1B0GU69 56 aa10.39□□□□□ -0.75
C4A-259ENST00000498271 DEFB116Q30KQ4 102 aa10.39□□□□□ -0.75
C4A-259ENST00000498271 ACYP2P14621 99 aa10.39□□□□□ -0.75
C4A-259ENST00000498271 VPREB1P12018 145 aa10.39□□□□□ -0.75
C4A-259ENST00000498271 Q8NBF4 154 aa10.38□□□□□ -0.75
C4A-259ENST00000498271 TRANK1O15050 2925 aa10.36□□□□□ -0.75
C4A-259ENST00000498271 Q9UF83 564 aa10.36□□□□□ -0.75
C4A-259ENST00000498271 MTORP42345 2549 aa10.35□□□□□ -0.75
C4A-259ENST00000498271 C8orf87E5RJ46 101 aa10.35□□□□□ -0.75
C4A-259ENST00000498271 PKD1L2Q7Z442 2459 aa10.35□□□□□ -0.75
C4A-259ENST00000498271 C22orf24Q9Y442 160 aa10.35□□□□□ -0.75
C4A-259ENST00000498271 ANKRD17O75179 2603 aaKnown RBP10.34□□□□□ -0.75
C4A-259ENST00000498271 CD164Q04900 197 aa10.32□□□□□ -0.76
C4A-259ENST00000498271 KRTAP24-1Q3LI83 254 aa10.32□□□□□ -0.76
C4A-259ENST00000498271 TRAV22A0A0B4J277 110 aa10.32□□□□□ -0.76
C4A-259ENST00000498271 CIRBP-AS1Q8TBR5 109 aa10.32□□□□□ -0.76
C4A-259ENST00000498271 C6orf48Q9UBA6 75 aa10.32□□□□□ -0.76
C4A-259ENST00000498271 A0A0C4DFX4 3053 aa10.29□□□□□ -0.76
C4A-259ENST00000498271 LINC00336Q6ZUF6 198 aa10.28□□□□□ -0.76
C4A-259ENST00000498271 GVQW2A0A096LPI5 108 aaPredicted RBP10.28□□□□□ -0.76
C4A-259ENST00000498271 WIPF1O43516 503 aa10.28□□□□□ -0.76
C4A-259ENST00000498271 PRLHP81277 87 aa10.28□□□□□ -0.76
C4A-259ENST00000498271 Q6ZRX8 168 aa10.28□□□□□ -0.76
C4A-259ENST00000498271 TRBV7-4A0A0J9YYF1 115 aa10.27□□□□□ -0.77
C4A-259ENST00000498271 LINC00167Q96N53 147 aa10.26□□□□□ -0.77
C4A-259ENST00000498271 IGLV6-57P01721 117 aa10.26□□□□□ -0.77
C4A-259ENST00000498271 LINC01556Q5JQF7 62 aa10.26□□□□□ -0.77
C4A-259ENST00000498271 SPINK1P00995 79 aa10.26□□□□□ -0.77
C4A-259ENST00000498271 H7BZZ5 65 aa10.25□□□□□ -0.77
C4A-259ENST00000498271 A8MUN3 132 aa10.24□□□□□ -0.77
C4A-259ENST00000498271 LINC00476Q8WZB0 136 aa10.24□□□□□ -0.77
C4A-259ENST00000498271 PLA2G1BP04054 148 aaKnown RBP10.24□□□□□ -0.77
C4A-259ENST00000498271 LINC01600Q96MT4 127 aa10.24□□□□□ -0.77
C4A-259ENST00000498271 MDFIQ99750 246 aa10.23□□□□□ -0.77
C4A-259ENST00000498271 J3QL48 77 aa10.23□□□□□ -0.77
C4A-259ENST00000498271 H3BNG1 76 aa10.23□□□□□ -0.77
C4A-259ENST00000498271 ATP11AUNQ6ZP68 121 aa10.23□□□□□ -0.77
C4A-259ENST00000498271 RETNLBQ9BQ08 111 aa10.22□□□□□ -0.77
C4A-259ENST00000498271 ACANP16112 2415 aa10.22□□□□□ -0.77
C4A-259ENST00000498271 MOBPQ13875 183 aa10.21□□□□□ -0.78
C4A-259ENST00000498271 C7orf65Q6ZTY9 151 aa10.2□□□□□ -0.78
C4A-259ENST00000498271 X6R8D5 127 aa10.2□□□□□ -0.78
C4A-259ENST00000498271 LOC101927531A0A1B0GV80 90 aa10.2□□□□□ -0.78
C4A-259ENST00000498271 LAMA2P24043 3122 aaKnown RBP10.19□□□□□ -0.78
C4A-259ENST00000498271 UNC80Q8N2C7 3258 aa10.19□□□□□ -0.78
C4A-259ENST00000498271 MUC4Q99102 2169 aa10.19□□□□□ -0.78
C4A-259ENST00000498271 COA5Q86WW8 74 aa10.19□□□□□ -0.78
C4A-259ENST00000498271 C16orf90A8MZG2 172 aa10.18□□□□□ -0.78
C4A-259ENST00000498271 KTN1-AS1Q86SY8 53 aa10.17□□□□□ -0.78
C4A-259ENST00000498271 A8MWP4 228 aa10.16□□□□□ -0.78
C4A-259ENST00000498271 EPG5Q9HCE0 2579 aa10.15□□□□□ -0.78
C4A-259ENST00000498271 IGKV2D-30A0A075B6S6 120 aa10.15□□□□□ -0.78
C4A-259ENST00000498271 IGKV2-30P06310 120 aa10.15□□□□□ -0.78
C4A-259ENST00000498271 A0A096LNT2 108 aa10.14□□□□□ -0.79
C4A-259ENST00000498271 K7EQZ3 153 aa10.13□□□□□ -0.79
C4A-259ENST00000498271 F8P00451 2351 aa10.12□□□□□ -0.79
C4A-259ENST00000498271 EIF4EBP3O60516 100 aaPredicted RBP10.12□□□□□ -0.79
C4A-259ENST00000498271 PRR15Q8IV56 129 aa10.11□□□□□ -0.79
C4A-259ENST00000498271 LCA10Q71F78 164 aa10.11□□□□□ -0.79
C4A-259ENST00000498271 LINC00528Q8N1L1 170 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms