RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 FABP4P15090 132 aa6.99□□□□□ -1.29
ERCC8-208ENST00000497892 FAM19A5Q7Z5A7 132 aaPredicted RBP6.99□□□□□ -1.29
ERCC8-208ENST00000497892 KRTAP7-1Q8IUC3 87 aa6.99□□□□□ -1.29
ERCC8-208ENST00000497892 PKHD1L1Q86WI1 4243 aa6.98□□□□□ -1.29
ERCC8-208ENST00000497892 KRTAP5-3Q6L8H2 238 aa6.98□□□□□ -1.29
ERCC8-208ENST00000497892 SFTA2Q6UW10 78 aa6.98□□□□□ -1.29
ERCC8-208ENST00000497892 PHF5AQ7RTV0 110 aaKnown RBP6.98□□□□□ -1.29
ERCC8-208ENST00000497892 XAGE1AQ9HD64 81 aa6.98□□□□□ -1.29
ERCC8-208ENST00000497892 M0QXV9 152 aa6.97□□□□□ -1.29
ERCC8-208ENST00000497892 PLNP26678 52 aa6.97□□□□□ -1.29
ERCC8-208ENST00000497892 COA6Q5JTJ3 125 aaKnown RBP6.97□□□□□ -1.29
ERCC8-208ENST00000497892 ZNF625Q96I27 306 aaPredicted RBP6.96□□□□□ -1.3
ERCC8-208ENST00000497892 MAP1LC3CQ9BXW4 147 aa6.96□□□□□ -1.3
ERCC8-208ENST00000497892 DPM2O94777 84 aa6.95□□□□□ -1.3
ERCC8-208ENST00000497892 SERTAD4-AS1Q5TG53 156 aa6.95□□□□□ -1.3
ERCC8-208ENST00000497892 PSORS1C2Q9UIG4 136 aa6.95□□□□□ -1.3
ERCC8-208ENST00000497892 ERG28Q9UKR5 140 aa6.95□□□□□ -1.3
ERCC8-208ENST00000497892 KRTAP29-1A8MX34 341 aaPredicted RBP6.94□□□□□ -1.3
ERCC8-208ENST00000497892 COX17Q14061 63 aa6.94□□□□□ -1.3
ERCC8-208ENST00000497892 KRTAP11-1Q8IUC1 163 aa6.94□□□□□ -1.3
ERCC8-208ENST00000497892 PMCHL2Q9BQD1 86 aa6.94□□□□□ -1.3
ERCC8-208ENST00000497892 LRP1Q07954 4544 aaKnown RBP6.94□□□□□ -1.3
ERCC8-208ENST00000497892 SYS1-DBNDD2H3BUS1 97 aa6.93□□□□□ -1.3
ERCC8-208ENST00000497892 IGKCP01834 107 aa6.93□□□□□ -1.3
ERCC8-208ENST00000497892 PFN2P35080 140 aa6.93□□□□□ -1.3
ERCC8-208ENST00000497892 OXTP01178 125 aa6.92□□□□□ -1.3
ERCC8-208ENST00000497892 SND1-IT1Q9HBX3 110 aa6.92□□□□□ -1.3
ERCC8-208ENST00000497892 TP73-AS1Q9UF72 201 aa6.92□□□□□ -1.3
ERCC8-208ENST00000497892 IGLV5-37A0A075B6J1 123 aa6.91□□□□□ -1.3
ERCC8-208ENST00000497892 TSPEAR-AS2P59090 65 aa6.91□□□□□ -1.3
ERCC8-208ENST00000497892 UBE2BP63146 152 aa6.91□□□□□ -1.3
ERCC8-208ENST00000497892 C1orf137Q5JT78 98 aa6.91□□□□□ -1.3
ERCC8-208ENST00000497892 C22orf24Q9Y442 160 aa6.91□□□□□ -1.3
ERCC8-208ENST00000497892 FAT3Q8TDW7 4589 aa6.91□□□□□ -1.3
ERCC8-208ENST00000497892 LEPROTO15243 131 aa6.9□□□□□ -1.3
ERCC8-208ENST00000497892 HERVK_113P61574 105 aa6.9□□□□□ -1.3
ERCC8-208ENST00000497892 HERV-K104P63124 156 aa6.9□□□□□ -1.3
ERCC8-208ENST00000497892 SRSF9Q13242 221 aaKnown RBP eCLIP6.9□□□□□ -1.3
ERCC8-208ENST00000497892 LBHQ53QV2 105 aaPredicted RBP6.9□□□□□ -1.3
ERCC8-208ENST00000497892 LINC01545Q5VT33 79 aa6.9□□□□□ -1.3
ERCC8-208ENST00000497892 SPINK6Q6UWN8 80 aa6.9□□□□□ -1.3
ERCC8-208ENST00000497892 MRPL55Q7Z7F7 128 aaKnown RBP6.9□□□□□ -1.3
ERCC8-208ENST00000497892 PLEKHB2Q96CS7 222 aa6.9□□□□□ -1.3
ERCC8-208ENST00000497892 NDUFA12Q9UI09 145 aa6.9□□□□□ -1.3
ERCC8-208ENST00000497892 HERC1Q15751 4861 aa6.89□□□□□ -1.31
ERCC8-208ENST00000497892 PET117Q6UWS5 81 aa6.89□□□□□ -1.31
ERCC8-208ENST00000497892 MYMXA0A1B0GTQ4 84 aa6.88□□□□□ -1.31
ERCC8-208ENST00000497892 J3QQQ9 107 aa6.88□□□□□ -1.31
ERCC8-208ENST00000497892 IGLV7-43P04211 117 aa6.88□□□□□ -1.31
ERCC8-208ENST00000497892 C3orf79P0CE67 100 aa6.88□□□□□ -1.31
ERCC8-208ENST00000497892 LINC00158P58513 81 aa6.88□□□□□ -1.31
ERCC8-208ENST00000497892 E9PLD3 99 aa6.87□□□□□ -1.31
ERCC8-208ENST00000497892 SMIM13P0DJ93 91 aa6.87□□□□□ -1.31
ERCC8-208ENST00000497892 VPREB1P12018 145 aa6.87□□□□□ -1.31
ERCC8-208ENST00000497892 NMUP48645 174 aa6.87□□□□□ -1.31
ERCC8-208ENST00000497892 MEIG1Q5JSS6 88 aa6.87□□□□□ -1.31
ERCC8-208ENST00000497892 NKAPP1Q8N9T2 125 aa6.87□□□□□ -1.31
ERCC8-208ENST00000497892 A0A0U1RRA0 63 aa6.86□□□□□ -1.31
ERCC8-208ENST00000497892 LINC00587B1AMM8 73 aa6.86□□□□□ -1.31
ERCC8-208ENST00000497892 LGALS3P17931 250 aaKnown RBP6.86□□□□□ -1.31
ERCC8-208ENST00000497892 KRTDAPP60985 99 aa6.86□□□□□ -1.31
ERCC8-208ENST00000497892 RPL24P83731 157 aaKnown RBP6.86□□□□□ -1.31
ERCC8-208ENST00000497892 Q8NDZ9 215 aa6.86□□□□□ -1.31
ERCC8-208ENST00000497892 LINC00167Q96N53 147 aa6.86□□□□□ -1.31
ERCC8-208ENST00000497892 GAGE10A6NGK3 116 aa6.85□□□□□ -1.31
ERCC8-208ENST00000497892 REG3GQ6UW15 175 aa6.85□□□□□ -1.31
ERCC8-208ENST00000497892 MIR7-3HGQ8N6C7 128 aa6.85□□□□□ -1.31
ERCC8-208ENST00000497892 RPL37AP8A6NKH3 93 aa6.84□□□□□ -1.31
ERCC8-208ENST00000497892 MT1HL1P0DM35 61 aa6.84□□□□□ -1.31
ERCC8-208ENST00000497892 HIST3H2BBQ8N257 126 aa6.84□□□□□ -1.31
ERCC8-208ENST00000497892 C20orf202A1L168 122 aa6.83□□□□□ -1.32
ERCC8-208ENST00000497892 DIRC1Q969H9 104 aa6.83□□□□□ -1.32
ERCC8-208ENST00000497892 LINC01600Q96MT4 127 aa6.83□□□□□ -1.32
ERCC8-208ENST00000497892 IGKV2-28A0A075B6P5 120 aa6.82□□□□□ -1.32
ERCC8-208ENST00000497892 H0Y9J4 135 aa6.82□□□□□ -1.32
ERCC8-208ENST00000497892 BCE1O60756 84 aa6.82□□□□□ -1.32
ERCC8-208ENST00000497892 IGKV2D-28P01615 120 aa6.82□□□□□ -1.32
ERCC8-208ENST00000497892 HIST1H2BLQ99880 126 aa6.82□□□□□ -1.32
ERCC8-208ENST00000497892 IGLV1-50A0A075B6I6 118 aa6.81□□□□□ -1.32
ERCC8-208ENST00000497892 IGKV2D-26A0A0A0MRZ7 120 aa6.81□□□□□ -1.32
ERCC8-208ENST00000497892 A0A0J9YXY3 114 aa6.81□□□□□ -1.32
ERCC8-208ENST00000497892 S100A6P06703 90 aa6.81□□□□□ -1.32
ERCC8-208ENST00000497892 S100A2P29034 98 aa6.81□□□□□ -1.32
ERCC8-208ENST00000497892 BOD1L2Q8IYS8 172 aa6.81□□□□□ -1.32
ERCC8-208ENST00000497892 DAND5Q8N907 189 aa6.81□□□□□ -1.32
ERCC8-208ENST00000497892 LOC107984156A0A0G2JMH3 177 aa6.8□□□□□ -1.32
ERCC8-208ENST00000497892 ZNF861PO60384 105 aa6.8□□□□□ -1.32
ERCC8-208ENST00000497892 AKR1D1P51857 326 aa6.8□□□□□ -1.32
ERCC8-208ENST00000497892 ARL17AQ8IVW1 177 aa6.8□□□□□ -1.32
ERCC8-208ENST00000497892 TNXBP22105 4242 aa6.8□□□□□ -1.32
ERCC8-208ENST00000497892 RPL28P46779 137 aaKnown RBP6.79□□□□□ -1.32
ERCC8-208ENST00000497892 TMEM126AQ9H061 195 aa6.79□□□□□ -1.32
ERCC8-208ENST00000497892 TMEM238C9JI98 176 aa6.78□□□□□ -1.32
ERCC8-208ENST00000497892 M0R378 163 aa6.78□□□□□ -1.32
ERCC8-208ENST00000497892 KRTAP13-1Q8IUC0 172 aa6.78□□□□□ -1.32
ERCC8-208ENST00000497892 ATOH7Q8N100 152 aa6.78□□□□□ -1.32
ERCC8-208ENST00000497892 MIEN1Q9BRT3 115 aa6.78□□□□□ -1.32
ERCC8-208ENST00000497892 ZNF815PA8K554 130 aa6.77□□□□□ -1.33
ERCC8-208ENST00000497892 NCR3O14931 201 aa6.77□□□□□ -1.33
ERCC8-208ENST00000497892 TIMM17BO60830 172 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 354 ms