RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 DEFB130AP0DP74 79 aa8□□□□□ -1.13
SNRNP200-208ENST00000497539 KLKP1Q107X0 134 aa8□□□□□ -1.13
SNRNP200-208ENST00000497539 BCE1O60756 84 aa8□□□□□ -1.13
SNRNP200-208ENST00000497539 C20orf197Q8N268 126 aa8□□□□□ -1.13
SNRNP200-208ENST00000497539 H3BS24 57 aa7.99□□□□□ -1.13
SNRNP200-208ENST00000497539 INAFM2P0DMQ5 153 aa7.99□□□□□ -1.13
SNRNP200-208ENST00000497539 TOMM7Q9P0U1 55 aa7.99□□□□□ -1.13
SNRNP200-208ENST00000497539 C9orf129Q5T035 196 aaKnown RBP7.99□□□□□ -1.13
SNRNP200-208ENST00000497539 A0A1B0GUV1 79 aa7.98□□□□□ -1.13
SNRNP200-208ENST00000497539 IBA57-AS1B1ANH7 110 aa7.98□□□□□ -1.13
SNRNP200-208ENST00000497539 GYPEP15421 78 aa7.98□□□□□ -1.13
SNRNP200-208ENST00000497539 C6orf223Q8N319 242 aa7.98□□□□□ -1.13
SNRNP200-208ENST00000497539 GHRHP01286 108 aa7.97□□□□□ -1.13
SNRNP200-208ENST00000497539 KRTAP10-11P60412 298 aa7.97□□□□□ -1.13
SNRNP200-208ENST00000497539 A0A087WVE0 104 aa7.97□□□□□ -1.13
SNRNP200-208ENST00000497539 SPART-AS1P0CW21 52 aa7.97□□□□□ -1.13
SNRNP200-208ENST00000497539 LINC00337Q8N6G1 96 aa7.97□□□□□ -1.13
SNRNP200-208ENST00000497539 DAD1P61803 113 aa7.96□□□□□ -1.13
SNRNP200-208ENST00000497539 MIR7-3HGQ8N6C7 128 aa7.96□□□□□ -1.13
SNRNP200-208ENST00000497539 RBM3P98179 157 aaKnown RBP7.96□□□□□ -1.14
SNRNP200-208ENST00000497539 A0A087WYN8 130 aa7.96□□□□□ -1.14
SNRNP200-208ENST00000497539 CD164L2Q6UWJ8 174 aa7.96□□□□□ -1.14
SNRNP200-208ENST00000497539 CELA1Q9UNI1 258 aa7.95□□□□□ -1.14
SNRNP200-208ENST00000497539 TENM1Q9UKZ4 2725 aa7.95□□□□□ -1.14
SNRNP200-208ENST00000497539 IGKV2-28A0A075B6P5 120 aa7.95□□□□□ -1.14
SNRNP200-208ENST00000497539 IGKV2D-28P01615 120 aa7.95□□□□□ -1.14
SNRNP200-208ENST00000497539 C11orf68Q9H3H3 251 aaKnown RBP7.95□□□□□ -1.14
SNRNP200-208ENST00000497539 C14orf132Q9NPU4 83 aa7.95□□□□□ -1.14
SNRNP200-208ENST00000497539 IGKV3D-7A0A0C4DH55 119 aa7.94□□□□□ -1.14
SNRNP200-208ENST00000497539 NDUFC1O43677 76 aa7.94□□□□□ -1.14
SNRNP200-208ENST00000497539 LINC00158P58513 81 aa7.94□□□□□ -1.14
SNRNP200-208ENST00000497539 SND1-IT1Q9HBX3 110 aa7.94□□□□□ -1.14
SNRNP200-208ENST00000497539 IGLV4-60A0A075B6I1 120 aa7.94□□□□□ -1.14
SNRNP200-208ENST00000497539 CRPP02741 224 aa7.94□□□□□ -1.14
SNRNP200-208ENST00000497539 SLPIP03973 132 aa7.94□□□□□ -1.14
SNRNP200-208ENST00000497539 H3BNG1 76 aa7.93□□□□□ -1.14
SNRNP200-208ENST00000497539 OXLD1Q5BKU9 147 aa7.93□□□□□ -1.14
SNRNP200-208ENST00000497539 SMIM11BQ8TCY0 68 aa7.93□□□□□ -1.14
SNRNP200-208ENST00000497539 NBEAL2Q6ZNJ1 2754 aa7.93□□□□□ -1.14
SNRNP200-208ENST00000497539 TRAV13-2A0A0B4J235 113 aa7.93□□□□□ -1.14
SNRNP200-208ENST00000497539 IGHV3OR16-9A0A0B4J2B5 98 aa7.92□□□□□ -1.14
SNRNP200-208ENST00000497539 KTN1-AS1Q86SY8 53 aa7.92□□□□□ -1.14
SNRNP200-208ENST00000497539 VWFP04275 2813 aa7.92□□□□□ -1.14
SNRNP200-208ENST00000497539 TRAV7A0A075B6U4 112 aa7.92□□□□□ -1.14
SNRNP200-208ENST00000497539 A0A087WZ39 114 aa7.91□□□□□ -1.14
SNRNP200-208ENST00000497539 DNAL4O96015 105 aa7.91□□□□□ -1.14
SNRNP200-208ENST00000497539 RPL28P46779 137 aaKnown RBP7.91□□□□□ -1.14
SNRNP200-208ENST00000497539 COX7B2Q8TF08 81 aa7.91□□□□□ -1.14
SNRNP200-208ENST00000497539 LINC00959A0A1B0GUT2 108 aa7.91□□□□□ -1.14
SNRNP200-208ENST00000497539 NCR3O14931 201 aa7.9□□□□□ -1.14
SNRNP200-208ENST00000497539 DEFB4AO15263 64 aa7.9□□□□□ -1.14
SNRNP200-208ENST00000497539 CCL18P55774 89 aa7.9□□□□□ -1.14
SNRNP200-208ENST00000497539 LECT2O14960 151 aa7.9□□□□□ -1.15
SNRNP200-208ENST00000497539 MPLKIPQ8TAP9 179 aa7.89□□□□□ -1.15
SNRNP200-208ENST00000497539 LELP1Q5T871 98 aa7.89□□□□□ -1.15
SNRNP200-208ENST00000497539 LINC00846Q9NV44 126 aa7.89□□□□□ -1.15
SNRNP200-208ENST00000497539 F8WEM9 126 aa7.88□□□□□ -1.15
SNRNP200-208ENST00000497539 DNAH3Q8TD57 4116 aa7.88□□□□□ -1.15
SNRNP200-208ENST00000497539 FAM229BQ4G0N7 80 aa7.88□□□□□ -1.15
SNRNP200-208ENST00000497539 ATP5EP2Q5VTU8 51 aa7.88□□□□□ -1.15
SNRNP200-208ENST00000497539 A0A096LPF7 62 aa7.87□□□□□ -1.15
SNRNP200-208ENST00000497539 TRBV10-3A0A0K0K1G6 114 aa7.87□□□□□ -1.15
SNRNP200-208ENST00000497539 ATRQ13535 2644 aa7.87□□□□□ -1.15
SNRNP200-208ENST00000497539 C8orf87E5RJ46 101 aa7.86□□□□□ -1.15
SNRNP200-208ENST00000497539 PRR3P79522 188 aaKnown RBP7.86□□□□□ -1.15
SNRNP200-208ENST00000497539 M0R378 163 aa7.85□□□□□ -1.15
SNRNP200-208ENST00000497539 CMYA5Q8N3K9 4069 aa7.85□□□□□ -1.15
SNRNP200-208ENST00000497539 ESRGQ1W209 222 aa7.85□□□□□ -1.15
SNRNP200-208ENST00000497539 KPRPQ5T749 579 aaPredicted RBP7.85□□□□□ -1.15
SNRNP200-208ENST00000497539 CLPSL2Q6UWE3 100 aa7.84□□□□□ -1.15
SNRNP200-208ENST00000497539 Q8IZM0 81 aa7.84□□□□□ -1.15
SNRNP200-208ENST00000497539 OBSCN-AS1Q96MR7 158 aa7.84□□□□□ -1.15
SNRNP200-208ENST00000497539 LINC00588Q9Y4M8 146 aa7.84□□□□□ -1.15
SNRNP200-208ENST00000497539 TRAV23DV6A0A075B6W5 121 aa7.84□□□□□ -1.16
SNRNP200-208ENST00000497539 PRR26Q8N8Z3 221 aa7.84□□□□□ -1.16
SNRNP200-208ENST00000497539 PRR34Q9NV39 138 aa7.84□□□□□ -1.16
SNRNP200-208ENST00000497539 VPREB1P12018 145 aa7.83□□□□□ -1.16
SNRNP200-208ENST00000497539 S100A7L2Q5SY68 101 aa7.83□□□□□ -1.16
SNRNP200-208ENST00000497539 RMI2Q96E14 147 aa7.83□□□□□ -1.16
SNRNP200-208ENST00000497539 Q1T7F1 81 aa7.83□□□□□ -1.16
SNRNP200-208ENST00000497539 H0YGX0 51 aa7.82□□□□□ -1.16
SNRNP200-208ENST00000497539 NDUFS5O43920 106 aa7.82□□□□□ -1.16
SNRNP200-208ENST00000497539 REG3AQ06141 175 aa7.82□□□□□ -1.16
SNRNP200-208ENST00000497539 LINC00269Q8N2A0 174 aa7.81□□□□□ -1.16
SNRNP200-208ENST00000497539 CHCHD10Q8WYQ3 142 aaPredicted RBP7.8□□□□□ -1.16
SNRNP200-208ENST00000497539 HTN3P15516 51 aa7.8□□□□□ -1.16
SNRNP200-208ENST00000497539 KIAA0087Q14695 138 aa7.79□□□□□ -1.16
SNRNP200-208ENST00000497539 PHF5AQ7RTV0 110 aaKnown RBP7.79□□□□□ -1.16
SNRNP200-208ENST00000497539 ANGP03950 147 aaKnown RBP7.79□□□□□ -1.16
SNRNP200-208ENST00000497539 Q6ZTC4 211 aa7.79□□□□□ -1.16
SNRNP200-208ENST00000497539 ORMDL1Q9P0S3 153 aa7.79□□□□□ -1.16
SNRNP200-208ENST00000497539 SNURFQ9Y675 71 aa7.79□□□□□ -1.16
SNRNP200-208ENST00000497539 TRRAPQ9Y4A5 3859 aa7.78□□□□□ -1.16
SNRNP200-208ENST00000497539 FBN1P35555 2871 aaKnown RBP7.78□□□□□ -1.16
SNRNP200-208ENST00000497539 A0A0J9YWU9 116 aa7.78□□□□□ -1.16
SNRNP200-208ENST00000497539 Q6ZVQ6 151 aa7.77□□□□□ -1.16
SNRNP200-208ENST00000497539 MUC7Q8TAX7 377 aa7.77□□□□□ -1.16
SNRNP200-208ENST00000497539 COX17Q14061 63 aa7.77□□□□□ -1.17
SNRNP200-208ENST00000497539 C9orf116Q5BN46 136 aaPredicted RBP7.77□□□□□ -1.17
SNRNP200-208ENST00000497539 Q8N3U1 123 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms