RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 FCER1GP30273 86 aa1.99□□□□□ -2.09
MDM2-220ENST00000496959 RPL28P46779 137 aaKnown RBP1.99□□□□□ -2.09
MDM2-220ENST00000496959 CCL20P78556 96 aa1.99□□□□□ -2.09
MDM2-220ENST00000496959 CENPWQ5EE01 88 aa1.99□□□□□ -2.09
MDM2-220ENST00000496959 RPL7L1Q6DKI1 246 aaKnown RBP1.99□□□□□ -2.09
MDM2-220ENST00000496959 KCNRGQ8N5I3 272 aa1.99□□□□□ -2.09
MDM2-220ENST00000496959 ST20Q9HBF5 79 aa1.99□□□□□ -2.09
MDM2-220ENST00000496959 CDC42SE2Q9NRR3 84 aa1.99□□□□□ -2.09
MDM2-220ENST00000496959 ALG5Q9Y673 324 aa1.99□□□□□ -2.09
MDM2-220ENST00000496959 FXYD6-FXYD2A0A087WZ82 144 aa1.98□□□□□ -2.09
MDM2-220ENST00000496959 MUC21A0A140T8X8 626 aa1.98□□□□□ -2.09
MDM2-220ENST00000496959 A0A1B0GVG6 124 aa1.98□□□□□ -2.09
MDM2-220ENST00000496959 ZNF345Q14585 488 aa1.98□□□□□ -2.09
MDM2-220ENST00000496959 FAM229BQ4G0N7 80 aa1.98□□□□□ -2.09
MDM2-220ENST00000496959 LYZL1Q6UWQ5 148 aa1.98□□□□□ -2.09
MDM2-220ENST00000496959 FP248Q71RG6 208 aaPredicted RBP1.98□□□□□ -2.09
MDM2-220ENST00000496959 PHF5AQ7RTV0 110 aaKnown RBP1.98□□□□□ -2.09
MDM2-220ENST00000496959 ADM2Q7Z4H4 148 aa1.98□□□□□ -2.09
MDM2-220ENST00000496959 CBLN2Q8IUK8 224 aa1.98□□□□□ -2.09
MDM2-220ENST00000496959 GATD1Q8NB37 220 aa1.98□□□□□ -2.09
MDM2-220ENST00000496959 SFT2D1Q8WV19 159 aa1.98□□□□□ -2.09
MDM2-220ENST00000496959 MBD3L1Q8WWY6 194 aa1.98□□□□□ -2.09
MDM2-220ENST00000496959 PACRGQ96M98 296 aaPredicted RBP1.98□□□□□ -2.09
MDM2-220ENST00000496959 TIMM21Q9BVV7 248 aa1.98□□□□□ -2.09
MDM2-220ENST00000496959 SMDT1Q9H4I9 107 aa1.98□□□□□ -2.09
MDM2-220ENST00000496959 TGIF2-C20orf24A0A0A6YYL0 155 aa1.97□□□□□ -2.09
MDM2-220ENST00000496959 TRBV27A0A0K0K1C4 114 aa1.97□□□□□ -2.09
MDM2-220ENST00000496959 A8MWL6 223 aa1.97□□□□□ -2.09
MDM2-220ENST00000496959 NDUFC2-KCTD14E9PQ53 114 aa1.97□□□□□ -2.09
MDM2-220ENST00000496959 SMKR1H3BMG3 65 aa1.97□□□□□ -2.09
MDM2-220ENST00000496959 HBBP68871 147 aa1.97□□□□□ -2.09
MDM2-220ENST00000496959 SPAG11AQ6PDA7 123 aa1.97□□□□□ -2.09
MDM2-220ENST00000496959 FAM19A5Q7Z5A7 132 aaPredicted RBP1.97□□□□□ -2.09
MDM2-220ENST00000496959 FAM213BQ8TBF2 198 aa1.97□□□□□ -2.09
MDM2-220ENST00000496959 ORAOV1Q8WV07 137 aa1.97□□□□□ -2.09
MDM2-220ENST00000496959 SPANXA1Q9NS26 97 aa1.97□□□□□ -2.09
MDM2-220ENST00000496959 TP73-AS1Q9UF72 201 aa1.97□□□□□ -2.09
MDM2-220ENST00000496959 NDUFA12Q9UI09 145 aa1.97□□□□□ -2.09
MDM2-220ENST00000496959 IGKV2D-26A0A0A0MRZ7 120 aa1.96□□□□□ -2.1
MDM2-220ENST00000496959 TRAV13-1A0A0B4J241 112 aa1.96□□□□□ -2.1
MDM2-220ENST00000496959 KANTRA0A1W2PQU2 76 aa1.96□□□□□ -2.1
MDM2-220ENST00000496959 BCE1O60756 84 aa1.96□□□□□ -2.1
MDM2-220ENST00000496959 FAM19A2Q8N3H0 131 aa1.96□□□□□ -2.1
MDM2-220ENST00000496959 LINC00337Q8N6G1 96 aa1.96□□□□□ -2.1
MDM2-220ENST00000496959 RPL39LQ96EH5 51 aaKnown RBP1.96□□□□□ -2.1
MDM2-220ENST00000496959 C2orf88Q9BSF0 95 aa1.96□□□□□ -2.1
MDM2-220ENST00000496959 TMEM191AQ9H0A3 160 aa1.96□□□□□ -2.1
MDM2-220ENST00000496959 TMEM242Q9NWH2 141 aa1.96□□□□□ -2.1
MDM2-220ENST00000496959 GNG13Q9P2W3 67 aa1.96□□□□□ -2.1
MDM2-220ENST00000496959 UBE2D4Q9Y2X8 147 aa1.96□□□□□ -2.1
MDM2-220ENST00000496959 MUC2Q02817 5179 aa1.96□□□□□ -2.1
MDM2-220ENST00000496959 LPAP08519 4548 aa1.96□□□□□ -2.1
MDM2-220ENST00000496959 TRBV20OR9-2A0A075B6H5 130 aa1.95□□□□□ -2.1
MDM2-220ENST00000496959 IGHV3OR16-9A0A0B4J2B5 98 aa1.95□□□□□ -2.1
MDM2-220ENST00000496959 A0A1B0GW15 77 aa1.95□□□□□ -2.1
MDM2-220ENST00000496959 ARPC5O15511 151 aa1.95□□□□□ -2.1
MDM2-220ENST00000496959 POLR2KP53803 58 aaKnown RBP1.95□□□□□ -2.1
MDM2-220ENST00000496959 FOXA3P55318 350 aaPredicted RBP1.95□□□□□ -2.1
MDM2-220ENST00000496959 CKS1BP61024 79 aa1.95□□□□□ -2.1
MDM2-220ENST00000496959 SEC11AP67812 179 aa1.95□□□□□ -2.1
MDM2-220ENST00000496959 MRPS36P82909 103 aaKnown RBP1.95□□□□□ -2.1
MDM2-220ENST00000496959 Q6ZUT4 128 aa1.95□□□□□ -2.1
MDM2-220ENST00000496959 FAM231DQ6ZW35 169 aa1.95□□□□□ -2.1
MDM2-220ENST00000496959 MRPL55Q7Z7F7 128 aaKnown RBP1.95□□□□□ -2.1
MDM2-220ENST00000496959 C5orf38Q86SI9 138 aa1.95□□□□□ -2.1
MDM2-220ENST00000496959 C20orf78Q9BR46 151 aa1.95□□□□□ -2.1
MDM2-220ENST00000496959 MED9Q9NWA0 146 aa1.95□□□□□ -2.1
MDM2-220ENST00000496959 A0A1B0GUT8 65 aa1.94□□□□□ -2.1
MDM2-220ENST00000496959 LINC00862A6NCI5 91 aa1.94□□□□□ -2.1
MDM2-220ENST00000496959 HMSDA8MTL9 139 aa1.94□□□□□ -2.1
MDM2-220ENST00000496959 TMEM250H0YL14 139 aa1.94□□□□□ -2.1
MDM2-220ENST00000496959 GATCO43716 136 aaKnown RBP1.94□□□□□ -2.1
MDM2-220ENST00000496959 S100A8P05109 93 aa1.94□□□□□ -2.1
MDM2-220ENST00000496959 IFI27P40305 119 aaPredicted RBP1.94□□□□□ -2.1
MDM2-220ENST00000496959 ASB16-AS1Q495Z4 193 aa1.94□□□□□ -2.1
MDM2-220ENST00000496959 GNB1LQ9BYB4 327 aa1.94□□□□□ -2.1
MDM2-220ENST00000496959 C6orf48Q9UBA6 75 aa1.94□□□□□ -2.1
MDM2-220ENST00000496959 ZNF706Q9Y5V0 76 aaPredicted RBP1.94□□□□□ -2.1
MDM2-220ENST00000496959 A0A1B0GV50 99 aa1.93□□□□□ -2.1
MDM2-220ENST00000496959 ZNF727A8MUV8 499 aa1.93□□□□□ -2.1
MDM2-220ENST00000496959 PPBPP02775 128 aa1.93□□□□□ -2.1
MDM2-220ENST00000496959 RAB4AP20338 218 aa1.93□□□□□ -2.1
MDM2-220ENST00000496959 G0S2P27469 103 aa1.93□□□□□ -2.1
MDM2-220ENST00000496959 UNQ6190/PRO20217Q6UXQ8 127 aa1.93□□□□□ -2.1
MDM2-220ENST00000496959 Q8IZM0 81 aa1.93□□□□□ -2.1
MDM2-220ENST00000496959 DAND5Q8N907 189 aa1.93□□□□□ -2.1
MDM2-220ENST00000496959 RNASE7Q9H1E1 156 aaKnown RBP1.93□□□□□ -2.1
MDM2-220ENST00000496959 C22orf24Q9Y442 160 aa1.93□□□□□ -2.1
MDM2-220ENST00000496959 FAT4Q6V0I7 4981 aa1.92□□□□□ -2.1
MDM2-220ENST00000496959 TRBV24-1A0A075B6N3 115 aa1.92□□□□□ -2.1
MDM2-220ENST00000496959 A6NDN8 102 aa1.92□□□□□ -2.1
MDM2-220ENST00000496959 HIGD1CA8MV81 97 aa1.92□□□□□ -2.1
MDM2-220ENST00000496959 F8VRH5 84 aa1.92□□□□□ -2.1
MDM2-220ENST00000496959 F8W036 122 aa1.92□□□□□ -2.1
MDM2-220ENST00000496959 K7EMI3 77 aa1.92□□□□□ -2.1
MDM2-220ENST00000496959 SPINK1P00995 79 aa1.92□□□□□ -2.1
MDM2-220ENST00000496959 RAB5AP20339 215 aa1.92□□□□□ -2.1
MDM2-220ENST00000496959 RPS29P62273 56 aaKnown RBP1.92□□□□□ -2.1
MDM2-220ENST00000496959 HERVK_113P63121 156 aa1.92□□□□□ -2.1
MDM2-220ENST00000496959 IFITM3Q01628 133 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms