RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 COLCA2A8K830 154 aa19.82■□□□□ 0.76
CBX4-203ENST00000494546 UBE2AP49459 152 aa19.82■□□□□ 0.76
CBX4-203ENST00000494546 Q8NDZ9 215 aa19.8■□□□□ 0.76
CBX4-203ENST00000494546 SMIM13P0DJ93 91 aa19.76■□□□□ 0.75
CBX4-203ENST00000494546 FABP4P15090 132 aa19.76■□□□□ 0.75
CBX4-203ENST00000494546 MEIG1Q5JSS6 88 aa19.76■□□□□ 0.75
CBX4-203ENST00000494546 KRTAP13-1Q8IUC0 172 aa19.76■□□□□ 0.75
CBX4-203ENST00000494546 HSPB8Q9UJY1 196 aa19.76■□□□□ 0.75
CBX4-203ENST00000494546 ATP6V1G1O75348 118 aa19.75■□□□□ 0.75
CBX4-203ENST00000494546 TMEM238C9JI98 176 aa19.74■□□□□ 0.75
CBX4-203ENST00000494546 TMEM126AQ9H061 195 aa19.73■□□□□ 0.75
CBX4-203ENST00000494546 NDUFA12Q9UI09 145 aa19.73■□□□□ 0.75
CBX4-203ENST00000494546 LRP2P98164 4655 aa19.73■□□□□ 0.75
CBX4-203ENST00000494546 HERV-K104P63124 156 aa19.72■□□□□ 0.75
CBX4-203ENST00000494546 PRLHP81277 87 aa19.71■□□□□ 0.75
CBX4-203ENST00000494546 FAM19A1Q7Z5A9 133 aa19.71■□□□□ 0.75
CBX4-203ENST00000494546 A0A087X002 238 aa19.69■□□□□ 0.74
CBX4-203ENST00000494546 PLNP26678 52 aa19.69■□□□□ 0.74
CBX4-203ENST00000494546 MYMXA0A1B0GTQ4 84 aa19.68■□□□□ 0.74
CBX4-203ENST00000494546 M0R378 163 aa19.68■□□□□ 0.74
CBX4-203ENST00000494546 MIR7-3HGQ8N6C7 128 aa19.68■□□□□ 0.74
CBX4-203ENST00000494546 CRYGAP11844 174 aa19.67■□□□□ 0.74
CBX4-203ENST00000494546 PMCHL2Q9BQD1 86 aa19.67■□□□□ 0.74
CBX4-203ENST00000494546 ANAPC11Q9NYG5 84 aa19.67■□□□□ 0.74
CBX4-203ENST00000494546 LEPROTO15243 131 aa19.66■□□□□ 0.74
CBX4-203ENST00000494546 DPM2O94777 84 aa19.66■□□□□ 0.74
CBX4-203ENST00000494546 LINC00587B1AMM8 73 aa19.65■□□□□ 0.74
CBX4-203ENST00000494546 TSPEAR-AS2P59090 65 aa19.65■□□□□ 0.74
CBX4-203ENST00000494546 BOD1L2Q8IYS8 172 aa19.65■□□□□ 0.74
CBX4-203ENST00000494546 PLEKHB2Q96CS7 222 aa19.64■□□□□ 0.73
CBX4-203ENST00000494546 MAP1LC3CQ9BXW4 147 aa19.62■□□□□ 0.73
CBX4-203ENST00000494546 IGKCP01834 107 aa19.61■□□□□ 0.73
CBX4-203ENST00000494546 HERVK_113P61574 105 aa19.61■□□□□ 0.73
CBX4-203ENST00000494546 TYMSOSQ8TAI1 123 aa19.61■□□□□ 0.73
CBX4-203ENST00000494546 J3QQQ9 107 aa19.59■□□□□ 0.73
CBX4-203ENST00000494546 NCR3O14931 201 aa19.59■□□□□ 0.73
CBX4-203ENST00000494546 HIST1H2BKO60814 126 aa19.55■□□□□ 0.72
CBX4-203ENST00000494546 TSPAN13O95857 204 aa19.55■□□□□ 0.72
CBX4-203ENST00000494546 HIST1H2BJP06899 126 aa19.55■□□□□ 0.72
CBX4-203ENST00000494546 HIST1H2BOP23527 126 aa19.55■□□□□ 0.72
CBX4-203ENST00000494546 HIST1H2BBP33778 126 aa19.55■□□□□ 0.72
CBX4-203ENST00000494546 HIST1H2BDP58876 126 aa19.55■□□□□ 0.72
CBX4-203ENST00000494546 HIST1H2BCP62807 126 aa19.55■□□□□ 0.72
CBX4-203ENST00000494546 HIST2H2BEQ16778 126 aa19.55■□□□□ 0.72
CBX4-203ENST00000494546 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.55■□□□□ 0.72
CBX4-203ENST00000494546 HIST1H2BHQ93079 126 aa19.55■□□□□ 0.72
CBX4-203ENST00000494546 HIST1H2BNQ99877 126 aa19.55■□□□□ 0.72
CBX4-203ENST00000494546 HIST1H2BMQ99879 126 aa19.55■□□□□ 0.72
CBX4-203ENST00000494546 LGALS3P17931 250 aaKnown RBP19.54■□□□□ 0.72
CBX4-203ENST00000494546 DAND5Q8N907 189 aa19.54■□□□□ 0.72
CBX4-203ENST00000494546 FAM229BQ4G0N7 80 aa19.53■□□□□ 0.72
CBX4-203ENST00000494546 KRTAP13-2Q52LG2 175 aa19.53■□□□□ 0.72
CBX4-203ENST00000494546 HIGD2AQ9BW72 106 aa19.53■□□□□ 0.72
CBX4-203ENST00000494546 IGKV2D-26A0A0A0MRZ7 120 aa19.51■□□□□ 0.71
CBX4-203ENST00000494546 NMUP48645 174 aa19.51■□□□□ 0.71
CBX4-203ENST00000494546 PRR4Q16378 134 aa19.51■□□□□ 0.71
CBX4-203ENST00000494546 PRYO14603 147 aa19.5■□□□□ 0.71
CBX4-203ENST00000494546 TRBV10-3A0A0K0K1G6 114 aa19.45■□□□□ 0.7
CBX4-203ENST00000494546 SYS1-DBNDD2H3BUS1 97 aa19.45■□□□□ 0.7
CBX4-203ENST00000494546 KCNQ1DNQ9H478 68 aa19.45■□□□□ 0.7
CBX4-203ENST00000494546 LPAP08519 4548 aa19.43■□□□□ 0.7
CBX4-203ENST00000494546 LOC107984156A0A0G2JMH3 177 aa19.43■□□□□ 0.7
CBX4-203ENST00000494546 ARL17AQ8IVW1 177 aa19.43■□□□□ 0.7
CBX4-203ENST00000494546 E9PLD3 99 aa19.42■□□□□ 0.7
CBX4-203ENST00000494546 MIEN1Q9BRT3 115 aa19.42■□□□□ 0.7
CBX4-203ENST00000494546 SPRR1AP35321 89 aa19.41■□□□□ 0.7
CBX4-203ENST00000494546 LINC00337Q8N6G1 96 aa19.41■□□□□ 0.7
CBX4-203ENST00000494546 ETDCA0A1B0GVM5 59 aa19.39■□□□□ 0.69
CBX4-203ENST00000494546 S100A12P80511 92 aa19.39■□□□□ 0.69
CBX4-203ENST00000494546 LINC00304Q8N9R0 145 aa19.39■□□□□ 0.69
CBX4-203ENST00000494546 A0A0J9YXY3 114 aa19.37■□□□□ 0.69
CBX4-203ENST00000494546 SPRR4Q96PI1 79 aa19.37■□□□□ 0.69
CBX4-203ENST00000494546 DDTP30046 118 aa19.36■□□□□ 0.69
CBX4-203ENST00000494546 TRBV10-2A0A0K0K1G8 114 aa19.35■□□□□ 0.69
CBX4-203ENST00000494546 KRTAP4-16G5E9R7 235 aaPredicted RBP19.35■□□□□ 0.69
CBX4-203ENST00000494546 SPANXB1Q9NS25 103 aaPredicted RBP19.35■□□□□ 0.69
CBX4-203ENST00000494546 ZNF706Q9Y5V0 76 aaPredicted RBP19.35■□□□□ 0.69
CBX4-203ENST00000494546 NPC2P61916 151 aa19.34■□□□□ 0.69
CBX4-203ENST00000494546 LINC01545Q5VT33 79 aa19.34■□□□□ 0.69
CBX4-203ENST00000494546 PET117Q6UWS5 81 aa19.34■□□□□ 0.69
CBX4-203ENST00000494546 C3orf22Q8N5N4 141 aa19.34■□□□□ 0.69
CBX4-203ENST00000494546 ADAMTSL4-AS1Q5T5F5 129 aa19.32■□□□□ 0.68
CBX4-203ENST00000494546 SMCR5Q8TEV8 140 aa19.32■□□□□ 0.68
CBX4-203ENST00000494546 NDUFC2O95298 119 aa19.3■□□□□ 0.68
CBX4-203ENST00000494546 SOSTDC1Q6X4U4 206 aa19.3■□□□□ 0.68
CBX4-203ENST00000494546 S100A7L2Q5SY68 101 aa19.29■□□□□ 0.68
CBX4-203ENST00000494546 RNF213Q63HN8 5207 aa19.29■□□□□ 0.68
CBX4-203ENST00000494546 C3orf79P0CE67 100 aa19.28■□□□□ 0.68
CBX4-203ENST00000494546 EIF4EBP3O60516 100 aaPredicted RBP19.27■□□□□ 0.68
CBX4-203ENST00000494546 B5MCH6 92 aa19.26■□□□□ 0.67
CBX4-203ENST00000494546 COA6Q5JTJ3 125 aaKnown RBP19.26■□□□□ 0.67
CBX4-203ENST00000494546 PPDPFQ9H3Y8 114 aa19.25■□□□□ 0.67
CBX4-203ENST00000494546 KRTDAPP60985 99 aa19.24■□□□□ 0.67
CBX4-203ENST00000494546 IGLV6-57P01721 117 aa19.23■□□□□ 0.67
CBX4-203ENST00000494546 RETNLBQ9BQ08 111 aa19.23■□□□□ 0.67
CBX4-203ENST00000494546 ZNF815PA8K554 130 aa19.2■□□□□ 0.66
CBX4-203ENST00000494546 LITAFQ99732 161 aa19.19■□□□□ 0.66
CBX4-203ENST00000494546 TRAV23DV6A0A075B6W5 121 aa19.18■□□□□ 0.66
CBX4-203ENST00000494546 Q6ZRX8 168 aa19.18■□□□□ 0.66
CBX4-203ENST00000494546 TTTY13Q9BZ97 58 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms