RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PRSS2P07478 247 aa5.71□□□□□ -1.5
HDAC6-234ENST00000493923 BAALC-AS2P0C853 105 aa5.71□□□□□ -1.5
HDAC6-234ENST00000493923 TIRAPP58753 221 aa5.71□□□□□ -1.5
HDAC6-234ENST00000493923 RPL39LQ96EH5 51 aaKnown RBP5.71□□□□□ -1.5
HDAC6-234ENST00000493923 C16orf92Q96LL3 132 aa5.71□□□□□ -1.5
HDAC6-234ENST00000493923 LITAFQ99732 161 aa5.71□□□□□ -1.5
HDAC6-234ENST00000493923 PLAC8L1A1L4L8 177 aa5.7□□□□□ -1.5
HDAC6-234ENST00000493923 OXTP01178 125 aa5.7□□□□□ -1.5
HDAC6-234ENST00000493923 IGHV3-30-3P0DP02 117 aa5.7□□□□□ -1.5
HDAC6-234ENST00000493923 HTN3P15516 51 aa5.7□□□□□ -1.5
HDAC6-234ENST00000493923 RNASE4P34096 147 aaKnown RBP5.7□□□□□ -1.5
HDAC6-234ENST00000493923 SPINK13Q1W4C9 94 aa5.7□□□□□ -1.5
HDAC6-234ENST00000493923 C11orf21Q9P2W6 132 aa5.7□□□□□ -1.5
HDAC6-234ENST00000493923 NDUFA12Q9UI09 145 aa5.7□□□□□ -1.5
HDAC6-234ENST00000493923 GHRHP01286 108 aa5.69□□□□□ -1.5
HDAC6-234ENST00000493923 SPART-AS1P0CW21 52 aa5.69□□□□□ -1.5
HDAC6-234ENST00000493923 DNAH5Q8TE73 4624 aa5.68□□□□□ -1.5
HDAC6-234ENST00000493923 PRAC2D3DTV9 90 aa5.68□□□□□ -1.5
HDAC6-234ENST00000493923 Q6ZR54 194 aa5.68□□□□□ -1.5
HDAC6-234ENST00000493923 APOBP04114 4563 aaKnown RBP5.67□□□□□ -1.5
HDAC6-234ENST00000493923 NDUFA1O15239 70 aa5.67□□□□□ -1.5
HDAC6-234ENST00000493923 LINC00336Q6ZUF6 198 aa5.67□□□□□ -1.5
HDAC6-234ENST00000493923 C20orf203Q8NBC4 194 aa5.67□□□□□ -1.5
HDAC6-234ENST00000493923 UBE2D4Q9Y2X8 147 aa5.67□□□□□ -1.5
HDAC6-234ENST00000493923 TRAV7A0A075B6U4 112 aa5.66□□□□□ -1.5
HDAC6-234ENST00000493923 TRAV13-2A0A0B4J235 113 aa5.66□□□□□ -1.5
HDAC6-234ENST00000493923 H0YGX0 51 aa5.66□□□□□ -1.5
HDAC6-234ENST00000493923 DAD1P61803 113 aa5.66□□□□□ -1.5
HDAC6-234ENST00000493923 C6orf226Q5I0X4 101 aa5.66□□□□□ -1.5
HDAC6-234ENST00000493923 SUMO4Q6EEV6 95 aa5.66□□□□□ -1.5
HDAC6-234ENST00000493923 OBSCN-AS1Q96MR7 158 aa5.66□□□□□ -1.5
HDAC6-234ENST00000493923 KIF25-AS1Q9Y6Z4 181 aa5.66□□□□□ -1.5
HDAC6-234ENST00000493923 IGLV4-3A0A075B6K6 122 aa5.65□□□□□ -1.5
HDAC6-234ENST00000493923 INSP01308 110 aa5.65□□□□□ -1.5
HDAC6-234ENST00000493923 DEFB130BP0DP73 79 aa5.65□□□□□ -1.5
HDAC6-234ENST00000493923 DEFB130AP0DP74 79 aa5.65□□□□□ -1.5
HDAC6-234ENST00000493923 KRTAP4-5Q9BYR2 181 aa5.65□□□□□ -1.5
HDAC6-234ENST00000493923 A0A0J9YXV3 536 aa5.64□□□□□ -1.51
HDAC6-234ENST00000493923 XCL1P47992 114 aa5.64□□□□□ -1.51
HDAC6-234ENST00000493923 RPL39P62891 51 aaKnown RBP5.64□□□□□ -1.51
HDAC6-234ENST00000493923 FHL2Q14192 279 aa5.64□□□□□ -1.51
HDAC6-234ENST00000493923 UBE2DNLQ8IWF7 75 aa5.64□□□□□ -1.51
HDAC6-234ENST00000493923 KRTAP4-12Q9BQ66 201 aa5.64□□□□□ -1.51
HDAC6-234ENST00000493923 PKIGQ9Y2B9 76 aa5.64□□□□□ -1.51
HDAC6-234ENST00000493923 F5H697 171 aa5.63□□□□□ -1.51
HDAC6-234ENST00000493923 HTN1P15515 57 aa5.63□□□□□ -1.51
HDAC6-234ENST00000493923 RPL28P46779 137 aaKnown RBP5.63□□□□□ -1.51
HDAC6-234ENST00000493923 LINC00315P59091 139 aa5.63□□□□□ -1.51
HDAC6-234ENST00000493923 KLKP1Q107X0 134 aa5.63□□□□□ -1.51
HDAC6-234ENST00000493923 LINC01561Q8N1V8 128 aa5.63□□□□□ -1.51
HDAC6-234ENST00000493923 ZFAND2AQ8N6M9 145 aa5.63□□□□□ -1.51
HDAC6-234ENST00000493923 LINC00308Q8TCZ7 52 aa5.63□□□□□ -1.51
HDAC6-234ENST00000493923 CYSTM1Q9H1C7 97 aa5.63□□□□□ -1.51
HDAC6-234ENST00000493923 IGKV3D-7A0A0C4DH55 119 aa5.62□□□□□ -1.51
HDAC6-234ENST00000493923 LYRM9A8MSI8 78 aa5.62□□□□□ -1.51
HDAC6-234ENST00000493923 JMJD7-PLA2G4BH0Y9G9 81 aa5.62□□□□□ -1.51
HDAC6-234ENST00000493923 ADAMTSL4-AS1Q5T5F5 129 aa5.62□□□□□ -1.51
HDAC6-234ENST00000493923 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
HDAC6-234ENST00000493923 KRTAP1-5Q9BYS1 174 aa5.62□□□□□ -1.51
HDAC6-234ENST00000493923 NOP10Q9NPE3 64 aaKnown RBP5.62□□□□□ -1.51
HDAC6-234ENST00000493923 LINC00588Q9Y4M8 146 aa5.62□□□□□ -1.51
HDAC6-234ENST00000493923 IGHV3-64A0A075B6Q5 118 aa5.61□□□□□ -1.51
HDAC6-234ENST00000493923 TRAV12-3A0A0B4J271 114 aa5.61□□□□□ -1.51
HDAC6-234ENST00000493923 CRPP02741 224 aa5.61□□□□□ -1.51
HDAC6-234ENST00000493923 CCKP06307 115 aa5.61□□□□□ -1.51
HDAC6-234ENST00000493923 RNASE3P12724 160 aaKnown RBP5.61□□□□□ -1.51
HDAC6-234ENST00000493923 IGLV5-45A0A087WSX0 123 aa5.6□□□□□ -1.51
HDAC6-234ENST00000493923 H7BZZ5 65 aa5.6□□□□□ -1.51
HDAC6-234ENST00000493923 PAX4O43316 350 aa5.6□□□□□ -1.51
HDAC6-234ENST00000493923 PRR9Q5T870 116 aa5.6□□□□□ -1.51
HDAC6-234ENST00000493923 LYPD5Q6UWN5 251 aa5.6□□□□□ -1.51
HDAC6-234ENST00000493923 C20orf197Q8N268 126 aa5.6□□□□□ -1.51
HDAC6-234ENST00000493923 LINC00612Q8N6U2 182 aa5.6□□□□□ -1.51
HDAC6-234ENST00000493923 NBDYA0A0U1RRE5 68 aa5.59□□□□□ -1.51
HDAC6-234ENST00000493923 M0QY20 66 aa5.59□□□□□ -1.51
HDAC6-234ENST00000493923 C1orf134Q5TEV5 83 aa5.59□□□□□ -1.51
HDAC6-234ENST00000493923 Q6ZTI0 123 aa5.59□□□□□ -1.51
HDAC6-234ENST00000493923 BRK1Q8WUW1 75 aa5.59□□□□□ -1.51
HDAC6-234ENST00000493923 UBL5Q9BZL1 73 aa5.59□□□□□ -1.51
HDAC6-234ENST00000493923 LINC00846Q9NV44 126 aa5.59□□□□□ -1.51
HDAC6-234ENST00000493923 C16orf74Q96GX8 76 aa5.58□□□□□ -1.52
HDAC6-234ENST00000493923 C22orf24Q9Y442 160 aa5.58□□□□□ -1.52
HDAC6-234ENST00000493923 IGLV5-39A0A0G2JS06 123 aa5.57□□□□□ -1.52
HDAC6-234ENST00000493923 H3BQ85 93 aa5.57□□□□□ -1.52
HDAC6-234ENST00000493923 ERC2-IT1O76042 136 aa5.57□□□□□ -1.52
HDAC6-234ENST00000493923 RBM3P98179 157 aaKnown RBP5.57□□□□□ -1.52
HDAC6-234ENST00000493923 ESRGQ1W209 222 aa5.57□□□□□ -1.52
HDAC6-234ENST00000493923 FAM19A3Q7Z5A8 133 aa5.57□□□□□ -1.52
HDAC6-234ENST00000493923 PRR15Q8IV56 129 aa5.57□□□□□ -1.52
HDAC6-234ENST00000493923 C11orf72Q8NBR9 251 aa5.57□□□□□ -1.52
HDAC6-234ENST00000493923 ORMDL1Q9P0S3 153 aa5.57□□□□□ -1.52
HDAC6-234ENST00000493923 A0A087WVE0 104 aa5.56□□□□□ -1.52
HDAC6-234ENST00000493923 TRBV7-6A0A0J9YX20 115 aa5.56□□□□□ -1.52
HDAC6-234ENST00000493923 KLLNB2CW77 178 aa5.56□□□□□ -1.52
HDAC6-234ENST00000493923 PIK3CD-AS1Q5SR53 167 aa5.56□□□□□ -1.52
HDAC6-234ENST00000493923 FP248Q71RG6 208 aaPredicted RBP5.56□□□□□ -1.52
HDAC6-234ENST00000493923 C6orf223Q8N319 242 aa5.56□□□□□ -1.52
HDAC6-234ENST00000493923 C14orf132Q9NPU4 83 aa5.56□□□□□ -1.52
HDAC6-234ENST00000493923 FAT1Q14517 4588 aa5.56□□□□□ -1.52
HDAC6-234ENST00000493923 VPS13BQ7Z7G8 4022 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms