RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 Q6YL49 198 aa7.97□□□□□ -1.13
HDAC4-210ENST00000493582 CR1P17927 2039 aa7.96□□□□□ -1.13
HDAC4-210ENST00000493582 NAV2Q8IVL1 2488 aa7.96□□□□□ -1.13
HDAC4-210ENST00000493582 GNLYP22749 145 aa7.96□□□□□ -1.13
HDAC4-210ENST00000493582 LRRK2Q5S007 2527 aa7.96□□□□□ -1.14
HDAC4-210ENST00000493582 COX17Q14061 63 aa7.96□□□□□ -1.14
HDAC4-210ENST00000493582 C9orf66Q5T8R8 295 aa7.96□□□□□ -1.14
HDAC4-210ENST00000493582 V9GYY9 64 aa7.96□□□□□ -1.14
HDAC4-210ENST00000493582 MYO18BQ8IUG5 2567 aa7.95□□□□□ -1.14
HDAC4-210ENST00000493582 ATP5EP56381 51 aaPredicted RBP7.95□□□□□ -1.14
HDAC4-210ENST00000493582 C10orf25Q5T742 122 aa7.95□□□□□ -1.14
HDAC4-210ENST00000493582 LINC01356Q8N9X3 169 aa7.95□□□□□ -1.14
HDAC4-210ENST00000493582 ANKRD17O75179 2603 aaKnown RBP7.95□□□□□ -1.14
HDAC4-210ENST00000493582 GYPEP15421 78 aa7.94□□□□□ -1.14
HDAC4-210ENST00000493582 PDE6GP18545 87 aa7.94□□□□□ -1.14
HDAC4-210ENST00000493582 LINC01006Q8NI28 216 aa7.94□□□□□ -1.14
HDAC4-210ENST00000493582 SEC61GP60059 68 aa7.94□□□□□ -1.14
HDAC4-210ENST00000493582 FAM208BQ5VWN6 2430 aa7.94□□□□□ -1.14
HDAC4-210ENST00000493582 GCN1Q92616 2671 aaKnown RBP7.94□□□□□ -1.14
HDAC4-210ENST00000493582 DAD1P61803 113 aa7.94□□□□□ -1.14
HDAC4-210ENST00000493582 UNQ6190/PRO20217Q6UXQ8 127 aa7.93□□□□□ -1.14
HDAC4-210ENST00000493582 PKD1L2Q7Z442 2459 aa7.93□□□□□ -1.14
HDAC4-210ENST00000493582 CHCHD10Q8WYQ3 142 aaPredicted RBP7.93□□□□□ -1.14
HDAC4-210ENST00000493582 BBC3Q96PG8 261 aaPredicted RBP7.93□□□□□ -1.14
HDAC4-210ENST00000493582 A0A1B0GUV1 79 aa7.92□□□□□ -1.14
HDAC4-210ENST00000493582 IGHV4-28A0A0C4DH34 117 aa7.92□□□□□ -1.14
HDAC4-210ENST00000493582 CD164L2Q6UWJ8 174 aa7.92□□□□□ -1.14
HDAC4-210ENST00000493582 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.92□□□□□ -1.14
HDAC4-210ENST00000493582 LRCOL1A6NCL2 159 aa7.91□□□□□ -1.14
HDAC4-210ENST00000493582 IGLV6-57P01721 117 aa7.91□□□□□ -1.14
HDAC4-210ENST00000493582 PRYO14603 147 aa7.91□□□□□ -1.14
HDAC4-210ENST00000493582 ESRGQ1W209 222 aa7.91□□□□□ -1.14
HDAC4-210ENST00000493582 HIGD2AQ9BW72 106 aa7.91□□□□□ -1.14
HDAC4-210ENST00000493582 FUSP35637 526 aaKnown RBP eCLIP7.9□□□□□ -1.142e-6■■■■□ 21.3
HDAC4-210ENST00000493582 CSNK1G2-AS1Q8NCQ2 148 aa7.9□□□□□ -1.14
HDAC4-210ENST00000493582 ANGP03950 147 aaKnown RBP7.89□□□□□ -1.15
HDAC4-210ENST00000493582 Q6ZTC4 211 aa7.89□□□□□ -1.15
HDAC4-210ENST00000493582 OCR1Q9BZK8 76 aa7.89□□□□□ -1.15
HDAC4-210ENST00000493582 XAGE1AQ9HD64 81 aa7.89□□□□□ -1.15
HDAC4-210ENST00000493582 REG3AQ06141 175 aa7.88□□□□□ -1.15
HDAC4-210ENST00000493582 CCL24O00175 119 aa7.87□□□□□ -1.15
HDAC4-210ENST00000493582 ERC2-IT1O76042 136 aa7.87□□□□□ -1.15
HDAC4-210ENST00000493582 IGKV4-1P06312 121 aa7.87□□□□□ -1.15
HDAC4-210ENST00000493582 DOPEY1Q5JWR5 2465 aa7.87□□□□□ -1.15
HDAC4-210ENST00000493582 DIRC1Q969H9 104 aa7.87□□□□□ -1.15
HDAC4-210ENST00000493582 CYSRT1A8MQ03 144 aa7.87□□□□□ -1.15
HDAC4-210ENST00000493582 ESM1Q9NQ30 184 aa7.86□□□□□ -1.15
HDAC4-210ENST00000493582 IGHV4-31P0DP07 118 aa7.86□□□□□ -1.15
HDAC4-210ENST00000493582 SPAG11BQ08648 103 aa7.86□□□□□ -1.15
HDAC4-210ENST00000493582 ABCA12Q86UK0 2595 aa7.86□□□□□ -1.15
HDAC4-210ENST00000493582 ZNF73O43830 326 aaPredicted RBP7.85□□□□□ -1.15
HDAC4-210ENST00000493582 COX7BP24311 80 aa7.85□□□□□ -1.15
HDAC4-210ENST00000493582 C3orf84H3BNL1 204 aa7.85□□□□□ -1.15
HDAC4-210ENST00000493582 FSHBP01225 129 aa7.85□□□□□ -1.15
HDAC4-210ENST00000493582 CELA1Q9UNI1 258 aa7.84□□□□□ -1.15
HDAC4-210ENST00000493582 C19orf73Q9NVV2 129 aa7.84□□□□□ -1.15
HDAC4-210ENST00000493582 KLK12Q9UKR0 248 aa7.84□□□□□ -1.15
HDAC4-210ENST00000493582 H3BQ85 93 aa7.83□□□□□ -1.16
HDAC4-210ENST00000493582 LINC00612Q8N6U2 182 aa7.83□□□□□ -1.16
HDAC4-210ENST00000493582 FAM30AQ9NZY2 134 aa7.83□□□□□ -1.16
HDAC4-210ENST00000493582 DSCR9P59020 149 aa7.82□□□□□ -1.16
HDAC4-210ENST00000493582 PRO0255Q9UI72 69 aa7.82□□□□□ -1.16
HDAC4-210ENST00000493582 ZNF469Q96JG9 3925 aaPredicted RBP7.82□□□□□ -1.16
HDAC4-210ENST00000493582 CCDC168Q8NDH2 2452 aa7.82□□□□□ -1.16
HDAC4-210ENST00000493582 ELOF1P60002 83 aaKnown RBP7.81□□□□□ -1.16
HDAC4-210ENST00000493582 A0A0J9YWU9 116 aa7.81□□□□□ -1.16
HDAC4-210ENST00000493582 IGHV4-30-4P0DP06 118 aa7.81□□□□□ -1.16
HDAC4-210ENST00000493582 hDV103S1A0JD37 113 aa7.8□□□□□ -1.16
HDAC4-210ENST00000493582 Q6ZRP5 223 aa7.8□□□□□ -1.16
HDAC4-210ENST00000493582 HIGD2BQ4VC39 106 aa7.79□□□□□ -1.16
HDAC4-210ENST00000493582 SMIM29Q86T20 159 aa7.79□□□□□ -1.16
HDAC4-210ENST00000493582 IGSF10Q6WRI0 2623 aa7.79□□□□□ -1.16
HDAC4-210ENST00000493582 C6orf48Q9UBA6 75 aa7.79□□□□□ -1.16
HDAC4-210ENST00000493582 PSPHP1O15172 72 aa7.79□□□□□ -1.16
HDAC4-210ENST00000493582 DEFB4AO15263 64 aa7.79□□□□□ -1.16
HDAC4-210ENST00000493582 C1orf64Q8NEQ6 169 aa7.78□□□□□ -1.16
HDAC4-210ENST00000493582 ZNF462Q96JM2 2506 aa7.78□□□□□ -1.16
HDAC4-210ENST00000493582 PMAIP1Q13794 54 aa7.78□□□□□ -1.16
HDAC4-210ENST00000493582 CMC4P56277 68 aaPredicted RBP7.77□□□□□ -1.16
HDAC4-210ENST00000493582 DEFB105AQ8NG35 78 aa7.77□□□□□ -1.17
HDAC4-210ENST00000493582 PRR4Q16378 134 aa7.77□□□□□ -1.17
HDAC4-210ENST00000493582 PRR15Q8IV56 129 aa7.77□□□□□ -1.17
HDAC4-210ENST00000493582 IGLV1-51P01701 117 aa7.76□□□□□ -1.17
HDAC4-210ENST00000493582 PRB2P02812 416 aaPredicted RBP7.76□□□□□ -1.17
HDAC4-210ENST00000493582 LINC00528Q8N1L1 170 aa7.75□□□□□ -1.17
HDAC4-210ENST00000493582 MTORP42345 2549 aa7.74□□□□□ -1.17
HDAC4-210ENST00000493582 VPREB1P12018 145 aa7.73□□□□□ -1.17
HDAC4-210ENST00000493582 Q1T7F1 81 aa7.73□□□□□ -1.17
HDAC4-210ENST00000493582 X6R8D5 127 aa7.73□□□□□ -1.17
HDAC4-210ENST00000493582 NOTCH2Q04721 2471 aa7.72□□□□□ -1.17
HDAC4-210ENST00000493582 Q6ZRU5 148 aa7.72□□□□□ -1.17
HDAC4-210ENST00000493582 GVQW2A0A096LPI5 108 aaPredicted RBP7.71□□□□□ -1.17
HDAC4-210ENST00000493582 TRAV22A0A0B4J277 110 aa7.71□□□□□ -1.17
HDAC4-210ENST00000493582 FASNP49327 2511 aaKnown RBP7.71□□□□□ -1.17
HDAC4-210ENST00000493582 DNAJC9-AS1A6NH13 148 aa7.71□□□□□ -1.18
HDAC4-210ENST00000493582 A8MU10 97 aa7.71□□□□□ -1.18
HDAC4-210ENST00000493582 M0R378 163 aa7.7□□□□□ -1.18
HDAC4-210ENST00000493582 USP24Q9UPU5 2620 aa7.69□□□□□ -1.18
HDAC4-210ENST00000493582 HTN3P15516 51 aa7.69□□□□□ -1.18
HDAC4-210ENST00000493582 KPRPQ5T749 579 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms