RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 HIST1H2BHQ93079 126 aa9.04□□□□□ -0.96
EPHB4-209ENST00000492878 HIST1H2BNQ99877 126 aa9.04□□□□□ -0.96
EPHB4-209ENST00000492878 HIST1H2BMQ99879 126 aa9.04□□□□□ -0.96
EPHB4-209ENST00000492878 SFTA2Q6UW10 78 aa9.03□□□□□ -0.96
EPHB4-209ENST00000492878 UBE2BP63146 152 aa9.02□□□□□ -0.97
EPHB4-209ENST00000492878 PFN2P35080 140 aa9.01□□□□□ -0.97
EPHB4-209ENST00000492878 ERG28Q9UKR5 140 aa9.01□□□□□ -0.97
EPHB4-209ENST00000492878 C22orf24Q9Y442 160 aa9.01□□□□□ -0.97
EPHB4-209ENST00000492878 ZNF625Q96I27 306 aaPredicted RBP9□□□□□ -0.97
EPHB4-209ENST00000492878 PLNP26678 52 aa8.99□□□□□ -0.97
EPHB4-209ENST00000492878 COX17Q14061 63 aa8.99□□□□□ -0.97
EPHB4-209ENST00000492878 LBHQ53QV2 105 aaPredicted RBP8.99□□□□□ -0.97
EPHB4-209ENST00000492878 MAP1LC3CQ9BXW4 147 aa8.99□□□□□ -0.97
EPHB4-209ENST00000492878 TP73-AS1Q9UF72 201 aa8.98□□□□□ -0.97
EPHB4-209ENST00000492878 DPM2O94777 84 aa8.97□□□□□ -0.97
EPHB4-209ENST00000492878 MRPL55Q7Z7F7 128 aaKnown RBP8.97□□□□□ -0.97
EPHB4-209ENST00000492878 PMCHL2Q9BQD1 86 aa8.97□□□□□ -0.97
EPHB4-209ENST00000492878 TSPAN13O95857 204 aa8.96□□□□□ -0.98
EPHB4-209ENST00000492878 IGKCP01834 107 aa8.96□□□□□ -0.98
EPHB4-209ENST00000492878 S100A1P23297 94 aa8.96□□□□□ -0.98
EPHB4-209ENST00000492878 SND1-IT1Q9HBX3 110 aa8.96□□□□□ -0.98
EPHB4-209ENST00000492878 IGLV5-37A0A075B6J1 123 aa8.95□□□□□ -0.98
EPHB4-209ENST00000492878 LEPROTO15243 131 aa8.94□□□□□ -0.98
EPHB4-209ENST00000492878 LINC00158P58513 81 aa8.94□□□□□ -0.98
EPHB4-209ENST00000492878 HERVK_113P61574 105 aa8.94□□□□□ -0.98
EPHB4-209ENST00000492878 NKAPP1Q8N9T2 125 aa8.94□□□□□ -0.98
EPHB4-209ENST00000492878 NDUFA12Q9UI09 145 aa8.94□□□□□ -0.98
EPHB4-209ENST00000492878 SYS1-DBNDD2H3BUS1 97 aa8.93□□□□□ -0.98
EPHB4-209ENST00000492878 ATP6V1G1O75348 118 aa8.93□□□□□ -0.98
EPHB4-209ENST00000492878 HERV-K104P63124 156 aa8.93□□□□□ -0.98
EPHB4-209ENST00000492878 COA6Q5JTJ3 125 aaKnown RBP8.93□□□□□ -0.98
EPHB4-209ENST00000492878 PLEKHB2Q96CS7 222 aa8.93□□□□□ -0.98
EPHB4-209ENST00000492878 LINC00167Q96N53 147 aa8.93□□□□□ -0.98
EPHB4-209ENST00000492878 A0A0U1RRA0 63 aa8.92□□□□□ -0.98
EPHB4-209ENST00000492878 MYMXA0A1B0GTQ4 84 aa8.92□□□□□ -0.98
EPHB4-209ENST00000492878 GAGE10A6NGK3 116 aa8.92□□□□□ -0.98
EPHB4-209ENST00000492878 TSPEAR-AS2P59090 65 aa8.92□□□□□ -0.98
EPHB4-209ENST00000492878 MEIG1Q5JSS6 88 aa8.92□□□□□ -0.98
EPHB4-209ENST00000492878 RPL37AP8A6NKH3 93 aa8.91□□□□□ -0.98
EPHB4-209ENST00000492878 SMIM13P0DJ93 91 aa8.91□□□□□ -0.98
EPHB4-209ENST00000492878 VPREB1P12018 145 aa8.91□□□□□ -0.98
EPHB4-209ENST00000492878 RPL24P83731 157 aaKnown RBP8.91□□□□□ -0.98
EPHB4-209ENST00000492878 TPRXLQ17RH7 258 aa8.91□□□□□ -0.98
EPHB4-209ENST00000492878 LINC00587B1AMM8 73 aa8.9□□□□□ -0.98
EPHB4-209ENST00000492878 J3QQQ9 107 aa8.9□□□□□ -0.98
EPHB4-209ENST00000492878 LGALS3P17931 250 aaKnown RBP8.89□□□□□ -0.99
EPHB4-209ENST00000492878 PET117Q6UWS5 81 aa8.89□□□□□ -0.99
EPHB4-209ENST00000492878 A0A087X002 238 aa8.88□□□□□ -0.99
EPHB4-209ENST00000492878 ZNF861PO60384 105 aa8.88□□□□□ -0.99
EPHB4-209ENST00000492878 NMUP48645 174 aa8.88□□□□□ -0.99
EPHB4-209ENST00000492878 LINC01545Q5VT33 79 aa8.88□□□□□ -0.99
EPHB4-209ENST00000492878 MIR7-3HGQ8N6C7 128 aa8.88□□□□□ -0.99
EPHB4-209ENST00000492878 Q8NDZ9 215 aa8.88□□□□□ -0.99
EPHB4-209ENST00000492878 BCE1O60756 84 aa8.87□□□□□ -0.99
EPHB4-209ENST00000492878 C3orf79P0CE67 100 aa8.87□□□□□ -0.99
EPHB4-209ENST00000492878 CDIP1Q9H305 208 aa8.87□□□□□ -0.99
EPHB4-209ENST00000492878 IGKV2-28A0A075B6P5 120 aa8.86□□□□□ -0.99
EPHB4-209ENST00000492878 E9PLD3 99 aa8.86□□□□□ -0.99
EPHB4-209ENST00000492878 IGKV2D-28P01615 120 aa8.86□□□□□ -0.99
EPHB4-209ENST00000492878 KRTDAPP60985 99 aa8.86□□□□□ -0.99
EPHB4-209ENST00000492878 RPL28P46779 137 aaKnown RBP8.84□□□□□ -0.99
EPHB4-209ENST00000492878 BOD1L2Q8IYS8 172 aa8.84□□□□□ -0.99
EPHB4-209ENST00000492878 RETNLBQ9BQ08 111 aa8.84□□□□□ -0.99
EPHB4-209ENST00000492878 C20orf202A1L168 122 aa8.82□□□□□ -1
EPHB4-209ENST00000492878 M0R378 163 aa8.82□□□□□ -1
EPHB4-209ENST00000492878 DAND5Q8N907 189 aa8.82□□□□□ -1
EPHB4-209ENST00000492878 TYMSOSQ8TAI1 123 aa8.82□□□□□ -1
EPHB4-209ENST00000492878 CRYGAP11844 174 aa8.81□□□□□ -1
EPHB4-209ENST00000492878 UBE2AP49459 152 aa8.81□□□□□ -1
EPHB4-209ENST00000492878 LINC01547P58512 204 aaPredicted RBP8.81□□□□□ -1
EPHB4-209ENST00000492878 A0A0J9YXY3 114 aa8.8□□□□□ -1
EPHB4-209ENST00000492878 TMEM238C9JI98 176 aa8.8□□□□□ -1
EPHB4-209ENST00000492878 NCR3O14931 201 aa8.8□□□□□ -1
EPHB4-209ENST00000492878 TMEM126AQ9H061 195 aa8.8□□□□□ -1
EPHB4-209ENST00000492878 IGLV7-46A0A075B6I9 117 aa8.79□□□□□ -1
EPHB4-209ENST00000492878 IGKV2D-26A0A0A0MRZ7 120 aa8.79□□□□□ -1
EPHB4-209ENST00000492878 LOC107984156A0A0G2JMH3 177 aa8.79□□□□□ -1
EPHB4-209ENST00000492878 KRTAP13-2Q52LG2 175 aa8.79□□□□□ -1
EPHB4-209ENST00000492878 KRTAP13-1Q8IUC0 172 aa8.79□□□□□ -1
EPHB4-209ENST00000492878 ARL17AQ8IVW1 177 aa8.79□□□□□ -1
EPHB4-209ENST00000492878 FAM19A1Q7Z5A9 133 aa8.78□□□□□ -1
EPHB4-209ENST00000492878 HIST3H2BBQ8N257 126 aa8.78□□□□□ -1
EPHB4-209ENST00000492878 MIEN1Q9BRT3 115 aa8.78□□□□□ -1
EPHB4-209ENST00000492878 S100A2P29034 98 aa8.77□□□□□ -1.01
EPHB4-209ENST00000492878 ZNF815PA8K554 130 aa8.76□□□□□ -1.01
EPHB4-209ENST00000492878 S100A6P06703 90 aa8.76□□□□□ -1.01
EPHB4-209ENST00000492878 AKR1D1P51857 326 aa8.76□□□□□ -1.01
EPHB4-209ENST00000492878 CTAG1AP78358 180 aa8.76□□□□□ -1.01
EPHB4-209ENST00000492878 PRLHP81277 87 aa8.76□□□□□ -1.01
EPHB4-209ENST00000492878 ADAMTSL4-AS1Q5T5F5 129 aa8.75□□□□□ -1.01
EPHB4-209ENST00000492878 ATOH7Q8N100 152 aa8.75□□□□□ -1.01
EPHB4-209ENST00000492878 HIST1H2BLQ99880 126 aa8.75□□□□□ -1.01
EPHB4-209ENST00000492878 KRTAP4-1Q9BYQ7 146 aa8.75□□□□□ -1.01
EPHB4-209ENST00000492878 PRYO14603 147 aa8.74□□□□□ -1.01
EPHB4-209ENST00000492878 NPC2P61916 151 aa8.74□□□□□ -1.01
EPHB4-209ENST00000492878 LINC00304Q8N9R0 145 aa8.74□□□□□ -1.01
EPHB4-209ENST00000492878 TTTY13Q9BZ97 58 aa8.74□□□□□ -1.01
EPHB4-209ENST00000492878 SPANXB1Q9NS25 103 aaPredicted RBP8.74□□□□□ -1.01
EPHB4-209ENST00000492878 TRBV10-3A0A0K0K1G6 114 aa8.73□□□□□ -1.01
EPHB4-209ENST00000492878 TRBV10-2A0A0K0K1G8 114 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms