RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 TSPAN13O95857 204 aa4.68□□□□□ -1.66
SF3A3-206ENST00000487062 PSMB2P49721 201 aa4.68□□□□□ -1.66
SF3A3-206ENST00000487062 HIGD2BQ4VC39 106 aa4.68□□□□□ -1.66
SF3A3-206ENST00000487062 LINC00526Q96FQ7 95 aa4.68□□□□□ -1.66
SF3A3-206ENST00000487062 SPCS1Q9Y6A9 102 aa4.68□□□□□ -1.66
SF3A3-206ENST00000487062 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.68□□□□□ -1.66
SF3A3-206ENST00000487062 LOC107984156A0A0G2JMH3 177 aa4.67□□□□□ -1.66
SF3A3-206ENST00000487062 H7C2G1 150 aa4.67□□□□□ -1.66
SF3A3-206ENST00000487062 PRYO14603 147 aa4.67□□□□□ -1.66
SF3A3-206ENST00000487062 RPL13AP40429 203 aaKnown RBP4.67□□□□□ -1.66
SF3A3-206ENST00000487062 C9orf116Q5BN46 136 aaPredicted RBP4.67□□□□□ -1.66
SF3A3-206ENST00000487062 C10orf25Q5T742 122 aa4.67□□□□□ -1.66
SF3A3-206ENST00000487062 ARL17AQ8IVW1 177 aa4.67□□□□□ -1.66
SF3A3-206ENST00000487062 MEGF8Q7Z7M0 2845 aa4.67□□□□□ -1.66
SF3A3-206ENST00000487062 STAB2Q8WWQ8 2551 aa4.66□□□□□ -1.66
SF3A3-206ENST00000487062 NBDYA0A0U1RRE5 68 aa4.66□□□□□ -1.66
SF3A3-206ENST00000487062 USP17L23D6RBM5 183 aa4.66□□□□□ -1.66
SF3A3-206ENST00000487062 F8W1H4 67 aa4.66□□□□□ -1.66
SF3A3-206ENST00000487062 PSCAO43653 123 aa4.66□□□□□ -1.66
SF3A3-206ENST00000487062 NDUFC2O95298 119 aa4.66□□□□□ -1.66
SF3A3-206ENST00000487062 COX6CP09669 75 aa4.66□□□□□ -1.66
SF3A3-206ENST00000487062 SCGB1C2P0DMR2 95 aa4.66□□□□□ -1.66
SF3A3-206ENST00000487062 SYCNQ0VAF6 134 aa4.66□□□□□ -1.66
SF3A3-206ENST00000487062 WWC2-AS2Q96NR7 200 aa4.66□□□□□ -1.66
SF3A3-206ENST00000487062 C6orf48Q9UBA6 75 aa4.66□□□□□ -1.66
SF3A3-206ENST00000487062 TRBV20-1A0A075B6N2 111 aa4.65□□□□□ -1.67
SF3A3-206ENST00000487062 C14orf177Q52M58 125 aa4.65□□□□□ -1.67
SF3A3-206ENST00000487062 Q6ZRU5 148 aa4.65□□□□□ -1.67
SF3A3-206ENST00000487062 CARD19Q96LW7 228 aa4.65□□□□□ -1.67
SF3A3-206ENST00000487062 DYNC2H1Q8NCM8 4307 aaKnown RBP4.64□□□□□ -1.67
SF3A3-206ENST00000487062 OR13C6PQ8NH95 151 aa4.64□□□□□ -1.67
SF3A3-206ENST00000487062 KRTAP1-5Q9BYS1 174 aa4.64□□□□□ -1.67
SF3A3-206ENST00000487062 DNHD1Q96M86 4753 aa4.63□□□□□ -1.67
SF3A3-206ENST00000487062 IGKV2-28A0A075B6P5 120 aa4.63□□□□□ -1.67
SF3A3-206ENST00000487062 NDUFC2-KCTD14E9PQ53 114 aa4.63□□□□□ -1.67
SF3A3-206ENST00000487062 IGKV2D-28P01615 120 aa4.63□□□□□ -1.67
SF3A3-206ENST00000487062 CASC10Q5T4H9 136 aa4.63□□□□□ -1.67
SF3A3-206ENST00000487062 SIGMAR1Q99720 223 aa4.63□□□□□ -1.67
SF3A3-206ENST00000487062 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
SF3A3-206ENST00000487062 TRBV10-2A0A0K0K1G8 114 aa4.62□□□□□ -1.67
SF3A3-206ENST00000487062 TLX1NBP0CAT3 122 aa4.62□□□□□ -1.67
SF3A3-206ENST00000487062 RPL28P46779 137 aaKnown RBP4.62□□□□□ -1.67
SF3A3-206ENST00000487062 MTURNQ8N3F0 131 aa4.62□□□□□ -1.67
SF3A3-206ENST00000487062 LINC00337Q8N6G1 96 aa4.62□□□□□ -1.67
SF3A3-206ENST00000487062 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
SF3A3-206ENST00000487062 H3BMG7 143 aa4.61□□□□□ -1.67
SF3A3-206ENST00000487062 C3orf84H3BNL1 204 aa4.61□□□□□ -1.67
SF3A3-206ENST00000487062 LECT2O14960 151 aa4.61□□□□□ -1.67
SF3A3-206ENST00000487062 TCL1BO95988 128 aa4.61□□□□□ -1.67
SF3A3-206ENST00000487062 RPL18AQ02543 176 aaKnown RBP4.61□□□□□ -1.67
SF3A3-206ENST00000487062 ATXN8Q156A1 80 aa4.61□□□□□ -1.67
SF3A3-206ENST00000487062 S100A7L2Q5SY68 101 aa4.61□□□□□ -1.67
SF3A3-206ENST00000487062 TMEM126AQ9H061 195 aa4.61□□□□□ -1.67
SF3A3-206ENST00000487062 XAGE1AQ9HD64 81 aa4.61□□□□□ -1.67
SF3A3-206ENST00000487062 PKIGQ9Y2B9 76 aa4.61□□□□□ -1.67
SF3A3-206ENST00000487062 A0A0A0MQY5 61 aa4.6□□□□□ -1.67
SF3A3-206ENST00000487062 LOC107984640A0A0U1RRK4 108 aa4.6□□□□□ -1.67
SF3A3-206ENST00000487062 A0A1B0GV72 72 aa4.6□□□□□ -1.67
SF3A3-206ENST00000487062 M0R2N4 97 aa4.6□□□□□ -1.67
SF3A3-206ENST00000487062 NCR3O14931 201 aa4.6□□□□□ -1.67
SF3A3-206ENST00000487062 CNBPP62633 177 aaKnown RBP4.6□□□□□ -1.67
SF3A3-206ENST00000487062 GAGE2EQ4V326 116 aa4.6□□□□□ -1.67
SF3A3-206ENST00000487062 GAGE2DQ9UEU5 116 aa4.6□□□□□ -1.67
SF3A3-206ENST00000487062 H0YGX0 51 aa4.59□□□□□ -1.67
SF3A3-206ENST00000487062 SLPIP03973 132 aa4.59□□□□□ -1.67
SF3A3-206ENST00000487062 PRKDCP78527 4128 aaKnown RBP4.59□□□□□ -1.67
SF3A3-206ENST00000487062 Q6ZRP5 223 aa4.59□□□□□ -1.67
SF3A3-206ENST00000487062 SMIM11BQ8TCY0 68 aa4.59□□□□□ -1.67
SF3A3-206ENST00000487062 M0R378 163 aa4.58□□□□□ -1.68
SF3A3-206ENST00000487062 LST1O00453 97 aa4.58□□□□□ -1.68
SF3A3-206ENST00000487062 LY6G6CO95867 125 aa4.58□□□□□ -1.68
SF3A3-206ENST00000487062 VPREB1P12018 145 aa4.58□□□□□ -1.68
SF3A3-206ENST00000487062 PRR3P79522 188 aaKnown RBP4.58□□□□□ -1.68
SF3A3-206ENST00000487062 WFDC2Q14508 124 aa4.58□□□□□ -1.68
SF3A3-206ENST00000487062 LINC01620Q4KN68 170 aa4.58□□□□□ -1.68
SF3A3-206ENST00000487062 Q6ZRN7 208 aaPredicted RBP4.58□□□□□ -1.68
SF3A3-206ENST00000487062 NKAPP1Q8N9T2 125 aa4.58□□□□□ -1.68
SF3A3-206ENST00000487062 CLEC2BQ92478 149 aa4.58□□□□□ -1.68
SF3A3-206ENST00000487062 DNAH7Q8WXX0 4024 aa4.58□□□□□ -1.68
SF3A3-206ENST00000487062 SNCGO76070 127 aa4.57□□□□□ -1.68
SF3A3-206ENST00000487062 GAGE2BQ13066 116 aa4.57□□□□□ -1.68
SF3A3-206ENST00000487062 Q6ZR54 194 aa4.57□□□□□ -1.68
SF3A3-206ENST00000487062 Q8NDZ9 215 aa4.57□□□□□ -1.68
SF3A3-206ENST00000487062 LINC00476Q8WZB0 136 aa4.57□□□□□ -1.68
SF3A3-206ENST00000487062 TENM2Q9NT68 2774 aa4.56□□□□□ -1.68
SF3A3-206ENST00000487062 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.56□□□□□ -1.68
SF3A3-206ENST00000487062 LRCOL1A6NCL2 159 aa4.56□□□□□ -1.68
SF3A3-206ENST00000487062 C9JAW5 83 aa4.56□□□□□ -1.68
SF3A3-206ENST00000487062 M0QXV9 152 aa4.56□□□□□ -1.68
SF3A3-206ENST00000487062 IGLV6-57P01721 117 aa4.56□□□□□ -1.68
SF3A3-206ENST00000487062 TRACP01848 142 aa4.56□□□□□ -1.68
SF3A3-206ENST00000487062 C9orf129Q5T035 196 aaKnown RBP4.56□□□□□ -1.68
SF3A3-206ENST00000487062 C1orf134Q5TEV5 83 aa4.56□□□□□ -1.68
SF3A3-206ENST00000487062 PRO0461Q9UI25 63 aa4.56□□□□□ -1.68
SF3A3-206ENST00000487062 FBN3Q75N90 2809 aa4.56□□□□□ -1.68
SF3A3-206ENST00000487062 PLECQ15149 4684 aaKnown RBP4.55□□□□□ -1.68
SF3A3-206ENST00000487062 VPS13DQ5THJ4 4388 aa4.55□□□□□ -1.68
SF3A3-206ENST00000487062 IGLV5-37A0A075B6J1 123 aa4.55□□□□□ -1.68
SF3A3-206ENST00000487062 TRAV23DV6A0A075B6W5 121 aa4.55□□□□□ -1.68
SF3A3-206ENST00000487062 TRBV10-3A0A0K0K1G6 114 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms