RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 TRAV4A0A0B4J268 109 aa4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 A0A0B4J2C4 111 aa4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 IGKV3D-20A0A0C4DH25 116 aa4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 TRBV6-5A0A0K0K1A5 114 aa4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 ZNF815PA8K554 130 aa4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 SMKR1H3BMG3 65 aa4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 SCGB1C2P0DMR2 95 aa4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 ZNF80P51504 273 aaPredicted RBP4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 RHOHQ15669 191 aa4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 C2orf66Q6UXQ4 117 aa4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 CIRBP-AS1Q8TBR5 109 aa4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 BAALCQ8WXS3 180 aa4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 RASL10AQ92737 203 aa4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 KIR2DL4Q99706 377 aa4.21□□□□□ -1.74
TMEM39A-209ENST00000486235 SDHAF1A6NFY7 115 aa4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 K7ERJ3 54 aa4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 SPINK8P0C7L1 97 aa4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 GATA1P15976 413 aaPredicted RBP4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 S100A4P26447 101 aaKnown RBP4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 PMVKQ15126 192 aa4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 Q6ZUT4 128 aa4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 SH2D6Q7Z4S9 175 aa4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 SLC25A29Q8N8R3 303 aa4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 COPS9Q8WXC6 57 aa4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 PLEKHB2Q96CS7 222 aa4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 NAA38Q9BRA0 125 aaKnown RBP4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 PRADC1Q9BSG0 188 aa4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 PRO1854Q9UHT4 67 aa4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 ERG28Q9UKR5 140 aa4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 PHLDA3Q9Y5J5 127 aa4.2□□□□□ -1.74
TMEM39A-209ENST00000486235 PKHD1L1Q86WI1 4243 aa4.19□□□□□ -1.74
TMEM39A-209ENST00000486235 IGHV3-73A0A0B4J1V6 119 aa4.19□□□□□ -1.74
TMEM39A-209ENST00000486235 FAM240AA0A1B0GVK7 77 aa4.19□□□□□ -1.74
TMEM39A-209ENST00000486235 GNRH2O43555 120 aa4.19□□□□□ -1.74
TMEM39A-209ENST00000486235 TSPAN13O95857 204 aa4.19□□□□□ -1.74
TMEM39A-209ENST00000486235 RPL37AP61513 92 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-209ENST00000486235 ATXN8Q156A1 80 aa4.19□□□□□ -1.74
TMEM39A-209ENST00000486235 LELP1Q5T871 98 aa4.19□□□□□ -1.74
TMEM39A-209ENST00000486235 RNF213Q63HN8 5207 aa4.18□□□□□ -1.74
TMEM39A-209ENST00000486235 TRAV8-3A0A0A6YYJ7 113 aa4.18□□□□□ -1.74
TMEM39A-209ENST00000486235 LOC107984156A0A0G2JMH3 177 aa4.18□□□□□ -1.74
TMEM39A-209ENST00000486235 TRBV27A0A0K0K1C4 114 aa4.18□□□□□ -1.74
TMEM39A-209ENST00000486235 M0R2P5 195 aa4.18□□□□□ -1.74
TMEM39A-209ENST00000486235 SNCGO76070 127 aa4.18□□□□□ -1.74
TMEM39A-209ENST00000486235 COX6CP09669 75 aa4.18□□□□□ -1.74
TMEM39A-209ENST00000486235 LGALS3P17931 250 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-209ENST00000486235 DAZ4Q86SG3 579 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-209ENST00000486235 ARL17AQ8IVW1 177 aa4.18□□□□□ -1.74
TMEM39A-209ENST00000486235 DAZ3Q9NR90 486 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-209ENST00000486235 LRP2P98164 4655 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 IGKV2D-24A0A075B6R9 120 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 TRBV30A0A0K0K1B3 111 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 H3BT86 120 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 H3BVH4 76 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 LEPROTO15243 131 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 ACYP1P07311 99 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 MT1HL1P0DM35 61 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 PSMB2P49721 201 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 POLR2KP53803 58 aaKnown RBP4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 ZNF876PQ49A33 203 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 DNAJC30Q96LL9 226 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 FAM218AQ96MZ4 157 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 ANAPC13Q9BS18 74 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 IMUPQ9GZP8 106 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 PPDPFQ9H3Y8 114 aa4.17□□□□□ -1.74
TMEM39A-209ENST00000486235 A0A0J9YXY3 114 aa4.16□□□□□ -1.74
TMEM39A-209ENST00000486235 IGIPA6NJ69 53 aa4.16□□□□□ -1.74
TMEM39A-209ENST00000486235 J3QQQ9 107 aa4.16□□□□□ -1.74
TMEM39A-209ENST00000486235 SLC25A20O43772 301 aa4.16□□□□□ -1.74
TMEM39A-209ENST00000486235 TIMM17BO60830 172 aa4.16□□□□□ -1.74
TMEM39A-209ENST00000486235 CFC1BP0CG36 223 aa4.16□□□□□ -1.74
TMEM39A-209ENST00000486235 CFC1P0CG37 223 aa4.16□□□□□ -1.74
TMEM39A-209ENST00000486235 IFITM1P13164 125 aa4.16□□□□□ -1.74
TMEM39A-209ENST00000486235 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
TMEM39A-209ENST00000486235 LINC01561Q8N1V8 128 aa4.16□□□□□ -1.74
TMEM39A-209ENST00000486235 ANKRD29Q8N6D5 301 aa4.16□□□□□ -1.74
TMEM39A-209ENST00000486235 PYGO1Q9Y3Y4 419 aa4.16□□□□□ -1.74
TMEM39A-209ENST00000486235 IGLV4-69A0A075B6H9 119 aa4.15□□□□□ -1.75
TMEM39A-209ENST00000486235 TRBV10-2A0A0K0K1G8 114 aa4.15□□□□□ -1.75
TMEM39A-209ENST00000486235 A0A1B0GUV1 79 aa4.15□□□□□ -1.75
TMEM39A-209ENST00000486235 TRBV6-4A0A1B0GX49 114 aa4.15□□□□□ -1.75
TMEM39A-209ENST00000486235 KRTAP10-12P60413 245 aa4.15□□□□□ -1.75
TMEM39A-209ENST00000486235 ZFP2Q6ZN57 461 aa4.15□□□□□ -1.75
TMEM39A-209ENST00000486235 UBE2WQ96B02 151 aa4.15□□□□□ -1.75
TMEM39A-209ENST00000486235 RMI2Q96E14 147 aa4.15□□□□□ -1.75
TMEM39A-209ENST00000486235 TTTY13Q9BZ97 58 aa4.15□□□□□ -1.75
TMEM39A-209ENST00000486235 KLK12Q9UKR0 248 aa4.15□□□□□ -1.75
TMEM39A-209ENST00000486235 TNXBP22105 4242 aa4.14□□□□□ -1.75
TMEM39A-209ENST00000486235 TRAV26-2A0A0B4J265 109 aa4.14□□□□□ -1.75
TMEM39A-209ENST00000486235 TCL1BO95988 128 aa4.14□□□□□ -1.75
TMEM39A-209ENST00000486235 MGPP08493 103 aa4.14□□□□□ -1.75
TMEM39A-209ENST00000486235 TMEM170BQ5T4T1 132 aa4.14□□□□□ -1.75
TMEM39A-209ENST00000486235 PTH2Q96A98 100 aa4.14□□□□□ -1.75
TMEM39A-209ENST00000486235 TMEM126AQ9H061 195 aa4.14□□□□□ -1.75
TMEM39A-209ENST00000486235 KIF25-AS1Q9Y6Z4 181 aa4.14□□□□□ -1.75
TMEM39A-209ENST00000486235 TRAV8-4A0A0B4J246 113 aa4.13□□□□□ -1.75
TMEM39A-209ENST00000486235 TMEM223A0PJW6 202 aa4.13□□□□□ -1.75
TMEM39A-209ENST00000486235 LINC00694P0DN24 101 aa4.13□□□□□ -1.75
TMEM39A-209ENST00000486235 C14orf178Q8N769 122 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms