RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 GAGE2EQ4V326 116 aa11.04□□□□□ -0.64
MCF2L-226ENST00000486210 GAGE2DQ9UEU5 116 aa11.04□□□□□ -0.64
MCF2L-226ENST00000486210 ERG28Q9UKR5 140 aa11.04□□□□□ -0.64
MCF2L-226ENST00000486210 MYMXA0A1B0GTQ4 84 aa11.03□□□□□ -0.64
MCF2L-226ENST00000486210 PFN2P35080 140 aa11.03□□□□□ -0.64
MCF2L-226ENST00000486210 SFTA2Q6UW10 78 aa11.03□□□□□ -0.64
MCF2L-226ENST00000486210 PLAC8Q9NZF1 115 aa11.03□□□□□ -0.64
MCF2L-226ENST00000486210 A0A0U1RRA0 63 aa11.01□□□□□ -0.65
MCF2L-226ENST00000486210 NMUP48645 174 aa11.01□□□□□ -0.65
MCF2L-226ENST00000486210 HERV-K104P63124 156 aa11.01□□□□□ -0.65
MCF2L-226ENST00000486210 PYY3Q5JQD4 70 aa11.01□□□□□ -0.65
MCF2L-226ENST00000486210 SMIM13P0DJ93 91 aa11□□□□□ -0.65
MCF2L-226ENST00000486210 C9orf129Q5T035 196 aaKnown RBP11□□□□□ -0.65
MCF2L-226ENST00000486210 XAGE1AQ9HD64 81 aa11□□□□□ -0.65
MCF2L-226ENST00000486210 A0A1W2PNN7 141 aa10.99□□□□□ -0.65
MCF2L-226ENST00000486210 MEIG1Q5JSS6 88 aa10.99□□□□□ -0.65
MCF2L-226ENST00000486210 PCP2Q8IVA1 136 aa10.99□□□□□ -0.65
MCF2L-226ENST00000486210 LINC00474Q9P2X8 69 aa10.99□□□□□ -0.65
MCF2L-226ENST00000486210 A0A0J9YXY3 114 aa10.98□□□□□ -0.65
MCF2L-226ENST00000486210 FAM168BA1KXE4 195 aa10.98□□□□□ -0.65
MCF2L-226ENST00000486210 ZNF815PA8K554 130 aa10.98□□□□□ -0.65
MCF2L-226ENST00000486210 HSBP1L1C9JCN9 74 aa10.98□□□□□ -0.65
MCF2L-226ENST00000486210 LINC00158P58513 81 aa10.98□□□□□ -0.65
MCF2L-226ENST00000486210 COX17Q14061 63 aa10.97□□□□□ -0.65
MCF2L-226ENST00000486210 KRTAP7-1Q8IUC3 87 aa10.96□□□□□ -0.65
MCF2L-226ENST00000486210 LINC01600Q96MT4 127 aa10.95□□□□□ -0.66
MCF2L-226ENST00000486210 SND1-IT1Q9HBX3 110 aa10.95□□□□□ -0.66
MCF2L-226ENST00000486210 MIR7-3HGQ8N6C7 128 aa10.94□□□□□ -0.66
MCF2L-226ENST00000486210 DAND5Q8N907 189 aa10.94□□□□□ -0.66
MCF2L-226ENST00000486210 PAM16Q9Y3D7 125 aa10.94□□□□□ -0.66
MCF2L-226ENST00000486210 PRR3P79522 188 aaKnown RBP10.93□□□□□ -0.66
MCF2L-226ENST00000486210 ADAMTSL4-AS1Q5T5F5 129 aa10.93□□□□□ -0.66
MCF2L-226ENST00000486210 LOC105371267A0A1B0GV96 52 aa10.92□□□□□ -0.66
MCF2L-226ENST00000486210 LINC00587B1AMM8 73 aa10.92□□□□□ -0.66
MCF2L-226ENST00000486210 SPATA45Q537H7 98 aa10.92□□□□□ -0.66
MCF2L-226ENST00000486210 FAM19A5Q7Z5A7 132 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-226ENST00000486210 LITAFQ99732 161 aa10.92□□□□□ -0.66
MCF2L-226ENST00000486210 VAMP8Q9BV40 100 aa10.92□□□□□ -0.66
MCF2L-226ENST00000486210 TP73-AS1Q9UF72 201 aa10.92□□□□□ -0.66
MCF2L-226ENST00000486210 LPAP08519 4548 aa10.9□□□□□ -0.66
MCF2L-226ENST00000486210 Q8NDZ9 215 aa10.9□□□□□ -0.66
MCF2L-226ENST00000486210 PHF5AQ7RTV0 110 aaKnown RBP10.89□□□□□ -0.67
MCF2L-226ENST00000486210 TIMM17BO60830 172 aa10.88□□□□□ -0.67
MCF2L-226ENST00000486210 COX8AP10176 69 aa10.88□□□□□ -0.67
MCF2L-226ENST00000486210 REG3GQ6UW15 175 aa10.88□□□□□ -0.67
MCF2L-226ENST00000486210 SCGB1D4Q6XE38 83 aa10.88□□□□□ -0.67
MCF2L-226ENST00000486210 EIF4EBP3O60516 100 aaPredicted RBP10.87□□□□□ -0.67
MCF2L-226ENST00000486210 KRTAP10-8P60410 259 aa10.87□□□□□ -0.67
MCF2L-226ENST00000486210 NPC2P61916 151 aa10.87□□□□□ -0.67
MCF2L-226ENST00000486210 SOSTDC1Q6X4U4 206 aa10.87□□□□□ -0.67
MCF2L-226ENST00000486210 BOD1L2Q8IYS8 172 aa10.87□□□□□ -0.67
MCF2L-226ENST00000486210 C14orf144Q96I85 54 aa10.87□□□□□ -0.67
MCF2L-226ENST00000486210 VPREB1P12018 145 aa10.86□□□□□ -0.67
MCF2L-226ENST00000486210 SPINK6Q6UWN8 80 aa10.86□□□□□ -0.67
MCF2L-226ENST00000486210 C22orf24Q9Y442 160 aa10.86□□□□□ -0.67
MCF2L-226ENST00000486210 M0QXV9 152 aa10.85□□□□□ -0.67
MCF2L-226ENST00000486210 LOC107984156A0A0G2JMH3 177 aa10.84□□□□□ -0.67
MCF2L-226ENST00000486210 ARL17AQ8IVW1 177 aa10.84□□□□□ -0.67
MCF2L-226ENST00000486210 IGLV5-37A0A075B6J1 123 aa10.83□□□□□ -0.68
MCF2L-226ENST00000486210 KRTAP11-1Q8IUC1 163 aa10.83□□□□□ -0.68
MCF2L-226ENST00000486210 DLEU1O43261 78 aa10.82□□□□□ -0.68
MCF2L-226ENST00000486210 LINC00308Q8TCZ7 52 aa10.82□□□□□ -0.68
MCF2L-226ENST00000486210 SPANXDQ9BXN6 97 aa10.82□□□□□ -0.68
MCF2L-226ENST00000486210 SPANXCQ9NY87 97 aa10.82□□□□□ -0.68
MCF2L-226ENST00000486210 TMEM238C9JI98 176 aa10.81□□□□□ -0.68
MCF2L-226ENST00000486210 GAGE10A6NGK3 116 aa10.8□□□□□ -0.68
MCF2L-226ENST00000486210 RPL24P83731 157 aaKnown RBP10.8□□□□□ -0.68
MCF2L-226ENST00000486210 MRPL55Q7Z7F7 128 aaKnown RBP10.8□□□□□ -0.68
MCF2L-226ENST00000486210 LINC00167Q96N53 147 aa10.8□□□□□ -0.68
MCF2L-226ENST00000486210 SLC25A34Q6PIV7 304 aa10.79□□□□□ -0.68
MCF2L-226ENST00000486210 NKAPP1Q8N9T2 125 aa10.79□□□□□ -0.68
MCF2L-226ENST00000486210 MIEN1Q9BRT3 115 aa10.79□□□□□ -0.68
MCF2L-226ENST00000486210 NCR3O14931 201 aa10.78□□□□□ -0.68
MCF2L-226ENST00000486210 SMIM6P0DI80 62 aa10.78□□□□□ -0.68
MCF2L-226ENST00000486210 S100A12P80511 92 aa10.78□□□□□ -0.68
MCF2L-226ENST00000486210 SPANXB1Q9NS25 103 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-226ENST00000486210 RPL37AP8A6NKH3 93 aa10.77□□□□□ -0.69
MCF2L-226ENST00000486210 LBHQ53QV2 105 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-226ENST00000486210 C2orf91Q6ZV80 131 aa10.77□□□□□ -0.69
MCF2L-226ENST00000486210 MUSTN1Q8IVN3 82 aa10.77□□□□□ -0.69
MCF2L-226ENST00000486210 UBE2BP63146 152 aa10.76□□□□□ -0.69
MCF2L-226ENST00000486210 SRSF9Q13242 221 aaKnown RBP eCLIP10.76□□□□□ -0.69
MCF2L-226ENST00000486210 M0R378 163 aa10.75□□□□□ -0.69
MCF2L-226ENST00000486210 NDUFC2O95298 119 aa10.75□□□□□ -0.69
MCF2L-226ENST00000486210 Q6ZVH6 145 aa10.75□□□□□ -0.69
MCF2L-226ENST00000486210 PSORS1C2Q9UIG4 136 aa10.75□□□□□ -0.69
MCF2L-226ENST00000486210 IFITM1P13164 125 aa10.74□□□□□ -0.69
MCF2L-226ENST00000486210 HIGD1BQ9P298 99 aa10.73□□□□□ -0.69
MCF2L-226ENST00000486210 IGLV1-50A0A075B6I6 118 aa10.72□□□□□ -0.69
MCF2L-226ENST00000486210 IGKV2-28A0A075B6P5 120 aa10.72□□□□□ -0.69
MCF2L-226ENST00000486210 IGKV2D-28P01615 120 aa10.72□□□□□ -0.69
MCF2L-226ENST00000486210 PRO1933Q9H354 126 aa10.72□□□□□ -0.69
MCF2L-226ENST00000486210 MUC2Q02817 5179 aa10.72□□□□□ -0.69
MCF2L-226ENST00000486210 HIST1H4GQ99525 98 aa10.71□□□□□ -0.69
MCF2L-226ENST00000486210 PPDPFQ9H3Y8 114 aa10.71□□□□□ -0.69
MCF2L-226ENST00000486210 TRBV10-2A0A0K0K1G8 114 aa10.7□□□□□ -0.7
MCF2L-226ENST00000486210 C1orf137Q5JT78 98 aa10.7□□□□□ -0.7
MCF2L-226ENST00000486210 TRBV10-3A0A0K0K1G6 114 aa10.69□□□□□ -0.7
MCF2L-226ENST00000486210 COPS9Q8WXC6 57 aa10.69□□□□□ -0.7
MCF2L-226ENST00000486210 C12orf57Q99622 126 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms