RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 S100A1P23297 94 aa6.27□□□□□ -1.41
SPTLC1-206ENST00000482632 PHF5AQ7RTV0 110 aaKnown RBP6.27□□□□□ -1.41
SPTLC1-206ENST00000482632 XAGE1AQ9HD64 81 aa6.27□□□□□ -1.41
SPTLC1-206ENST00000482632 VPS13BQ7Z7G8 4022 aa6.27□□□□□ -1.41
SPTLC1-206ENST00000482632 PFN2P35080 140 aa6.26□□□□□ -1.41
SPTLC1-206ENST00000482632 ZNF625Q96I27 306 aaPredicted RBP6.26□□□□□ -1.41
SPTLC1-206ENST00000482632 PMCHL2Q9BQD1 86 aa6.26□□□□□ -1.41
SPTLC1-206ENST00000482632 FLG2Q5D862 2391 aaPredicted RBP6.25□□□□□ -1.41
SPTLC1-206ENST00000482632 IGLV5-39A0A0G2JS06 123 aa6.25□□□□□ -1.41
SPTLC1-206ENST00000482632 M0QXV9 152 aa6.25□□□□□ -1.41
SPTLC1-206ENST00000482632 UBE2BP63146 152 aa6.25□□□□□ -1.41
SPTLC1-206ENST00000482632 MAP1LC3CQ9BXW4 147 aa6.25□□□□□ -1.41
SPTLC1-206ENST00000482632 TMEM223A0PJW6 202 aa6.24□□□□□ -1.41
SPTLC1-206ENST00000482632 KRTAP10-4P60372 401 aaPredicted RBP6.24□□□□□ -1.41
SPTLC1-206ENST00000482632 PRR3P79522 188 aaKnown RBP6.24□□□□□ -1.41
SPTLC1-206ENST00000482632 C9orf129Q5T035 196 aaKnown RBP6.24□□□□□ -1.41
SPTLC1-206ENST00000482632 HMCN2Q8NDA2 5059 aa6.24□□□□□ -1.41
SPTLC1-206ENST00000482632 DPM2O94777 84 aa6.23□□□□□ -1.41
SPTLC1-206ENST00000482632 HNRNPA3P51991 378 aaKnown RBP6.23□□□□□ -1.41
SPTLC1-206ENST00000482632 A0A0U1RRA0 63 aa6.22□□□□□ -1.41
SPTLC1-206ENST00000482632 IGKCP01834 107 aa6.22□□□□□ -1.41
SPTLC1-206ENST00000482632 PLNP26678 52 aa6.22□□□□□ -1.41
SPTLC1-206ENST00000482632 HERVK_113P61574 105 aa6.22□□□□□ -1.41
SPTLC1-206ENST00000482632 ERG28Q9UKR5 140 aa6.22□□□□□ -1.41
SPTLC1-206ENST00000482632 LINC00158P58513 81 aa6.21□□□□□ -1.42
SPTLC1-206ENST00000482632 MEIG1Q5JSS6 88 aa6.21□□□□□ -1.42
SPTLC1-206ENST00000482632 C1orf137Q5JT78 98 aa6.21□□□□□ -1.42
SPTLC1-206ENST00000482632 SERTAD4-AS1Q5TG53 156 aa6.21□□□□□ -1.42
SPTLC1-206ENST00000482632 SFTA2Q6UW10 78 aa6.21□□□□□ -1.42
SPTLC1-206ENST00000482632 PSORS1C2Q9UIG4 136 aa6.21□□□□□ -1.42
SPTLC1-206ENST00000482632 NKAPP1Q8N9T2 125 aa6.2□□□□□ -1.42
SPTLC1-206ENST00000482632 NDUFA12Q9UI09 145 aa6.2□□□□□ -1.42
SPTLC1-206ENST00000482632 GAGE10A6NGK3 116 aa6.19□□□□□ -1.42
SPTLC1-206ENST00000482632 SYS1-DBNDD2H3BUS1 97 aa6.19□□□□□ -1.42
SPTLC1-206ENST00000482632 LGALS3P17931 250 aaKnown RBP6.19□□□□□ -1.42
SPTLC1-206ENST00000482632 KRTDAPP60985 99 aa6.19□□□□□ -1.42
SPTLC1-206ENST00000482632 KRTAP7-1Q8IUC3 87 aa6.19□□□□□ -1.42
SPTLC1-206ENST00000482632 PLEKHB2Q96CS7 222 aa6.19□□□□□ -1.42
SPTLC1-206ENST00000482632 C22orf24Q9Y442 160 aa6.19□□□□□ -1.42
SPTLC1-206ENST00000482632 MYMXA0A1B0GTQ4 84 aa6.18□□□□□ -1.42
SPTLC1-206ENST00000482632 LEPROTO15243 131 aa6.18□□□□□ -1.42
SPTLC1-206ENST00000482632 LBHQ53QV2 105 aaPredicted RBP6.18□□□□□ -1.42
SPTLC1-206ENST00000482632 SND1-IT1Q9HBX3 110 aa6.18□□□□□ -1.42
SPTLC1-206ENST00000482632 RPL37AP8A6NKH3 93 aa6.17□□□□□ -1.42
SPTLC1-206ENST00000482632 J3QQQ9 107 aa6.17□□□□□ -1.42
SPTLC1-206ENST00000482632 SMIM13P0DJ93 91 aa6.17□□□□□ -1.42
SPTLC1-206ENST00000482632 HERV-K104P63124 156 aa6.17□□□□□ -1.42
SPTLC1-206ENST00000482632 COX17Q14061 63 aa6.17□□□□□ -1.42
SPTLC1-206ENST00000482632 MRPL55Q7Z7F7 128 aaKnown RBP6.17□□□□□ -1.42
SPTLC1-206ENST00000482632 KRTAP11-1Q8IUC1 163 aa6.17□□□□□ -1.42
SPTLC1-206ENST00000482632 C3orf79P0CE67 100 aa6.16□□□□□ -1.42
SPTLC1-206ENST00000482632 S100A2P29034 98 aa6.16□□□□□ -1.42
SPTLC1-206ENST00000482632 TSPEAR-AS2P59090 65 aa6.16□□□□□ -1.42
SPTLC1-206ENST00000482632 COA6Q5JTJ3 125 aaKnown RBP6.16□□□□□ -1.42
SPTLC1-206ENST00000482632 PET117Q6UWS5 81 aa6.16□□□□□ -1.42
SPTLC1-206ENST00000482632 PKHD1L1Q86WI1 4243 aa6.15□□□□□ -1.42
SPTLC1-206ENST00000482632 C20orf202A1L168 122 aa6.15□□□□□ -1.42
SPTLC1-206ENST00000482632 KRTAP29-1A8MX34 341 aaPredicted RBP6.15□□□□□ -1.42
SPTLC1-206ENST00000482632 TRIAP1O43715 76 aa6.15□□□□□ -1.42
SPTLC1-206ENST00000482632 OXTP01178 125 aa6.15□□□□□ -1.42
SPTLC1-206ENST00000482632 S100A6P06703 90 aa6.15□□□□□ -1.42
SPTLC1-206ENST00000482632 LINC01545Q5VT33 79 aa6.15□□□□□ -1.42
SPTLC1-206ENST00000482632 SPINK6Q6UWN8 80 aa6.15□□□□□ -1.42
SPTLC1-206ENST00000482632 TP73-AS1Q9UF72 201 aa6.15□□□□□ -1.42
SPTLC1-206ENST00000482632 IGKV2-28A0A075B6P5 120 aa6.14□□□□□ -1.43
SPTLC1-206ENST00000482632 LINC00587B1AMM8 73 aa6.14□□□□□ -1.43
SPTLC1-206ENST00000482632 IGKV2D-28P01615 120 aa6.14□□□□□ -1.43
SPTLC1-206ENST00000482632 IGLV7-43P04211 117 aa6.14□□□□□ -1.43
SPTLC1-206ENST00000482632 RPL24P83731 157 aaKnown RBP6.14□□□□□ -1.43
SPTLC1-206ENST00000482632 REG3GQ6UW15 175 aa6.14□□□□□ -1.43
SPTLC1-206ENST00000482632 MIR7-3HGQ8N6C7 128 aa6.14□□□□□ -1.43
SPTLC1-206ENST00000482632 LINC00167Q96N53 147 aa6.14□□□□□ -1.43
SPTLC1-206ENST00000482632 NMUP48645 174 aa6.13□□□□□ -1.43
SPTLC1-206ENST00000482632 BOD1L2Q8IYS8 172 aa6.13□□□□□ -1.43
SPTLC1-206ENST00000482632 DAND5Q8N907 189 aa6.13□□□□□ -1.43
SPTLC1-206ENST00000482632 RNF213Q63HN8 5207 aa6.13□□□□□ -1.43
SPTLC1-206ENST00000482632 IGLV5-37A0A075B6J1 123 aa6.12□□□□□ -1.43
SPTLC1-206ENST00000482632 E9PLD3 99 aa6.12□□□□□ -1.43
SPTLC1-206ENST00000482632 NCR3O14931 201 aa6.12□□□□□ -1.43
SPTLC1-206ENST00000482632 VPREB1P12018 145 aa6.12□□□□□ -1.43
SPTLC1-206ENST00000482632 ATOH7Q8N100 152 aa6.12□□□□□ -1.43
SPTLC1-206ENST00000482632 NPC2P61916 151 aa6.11□□□□□ -1.43
SPTLC1-206ENST00000482632 SRSF9Q13242 221 aaKnown RBP eCLIP6.11□□□□□ -1.43
SPTLC1-206ENST00000482632 DIRC1Q969H9 104 aa6.11□□□□□ -1.43
SPTLC1-206ENST00000482632 MIEN1Q9BRT3 115 aa6.11□□□□□ -1.43
SPTLC1-206ENST00000482632 UBE2AP49459 152 aa6.1□□□□□ -1.43
SPTLC1-206ENST00000482632 HIST3H2BBQ8N257 126 aa6.1□□□□□ -1.43
SPTLC1-206ENST00000482632 A0A0J9YXY3 114 aa6.09□□□□□ -1.43
SPTLC1-206ENST00000482632 ZNF815PA8K554 130 aa6.09□□□□□ -1.43
SPTLC1-206ENST00000482632 BCE1O60756 84 aa6.09□□□□□ -1.43
SPTLC1-206ENST00000482632 Q8NDZ9 215 aa6.09□□□□□ -1.43
SPTLC1-206ENST00000482632 IGKV2D-26A0A0A0MRZ7 120 aa6.08□□□□□ -1.44
SPTLC1-206ENST00000482632 TMEM238C9JI98 176 aa6.08□□□□□ -1.44
SPTLC1-206ENST00000482632 H0Y9J4 135 aa6.08□□□□□ -1.44
SPTLC1-206ENST00000482632 M0R378 163 aa6.08□□□□□ -1.44
SPTLC1-206ENST00000482632 RPL28P46779 137 aaKnown RBP6.08□□□□□ -1.44
SPTLC1-206ENST00000482632 SNRPEP62304 92 aaKnown RBP6.08□□□□□ -1.44
SPTLC1-206ENST00000482632 FAM19A1Q7Z5A9 133 aa6.08□□□□□ -1.44
SPTLC1-206ENST00000482632 HIST1H2BLQ99880 126 aa6.08□□□□□ -1.44
SPTLC1-206ENST00000482632 TTTY13Q9BZ97 58 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms