RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 FAT3Q8TDW7 4589 aa12.61□□□□□ -0.39
CTSA-206ENST00000480961 LGALS3P17931 250 aaKnown RBP12.6□□□□□ -0.39
CTSA-206ENST00000480961 LRP1Q07954 4544 aaKnown RBP12.6□□□□□ -0.39
CTSA-206ENST00000480961 E9PLD3 99 aa12.59□□□□□ -0.39
CTSA-206ENST00000480961 HERV-K104P63124 156 aa12.59□□□□□ -0.39
CTSA-206ENST00000480961 UBE2BP63146 152 aa12.59□□□□□ -0.39
CTSA-206ENST00000480961 ATOH7Q8N100 152 aa12.59□□□□□ -0.39
CTSA-206ENST00000480961 C20orf202A1L168 122 aa12.58□□□□□ -0.4
CTSA-206ENST00000480961 GAGE10A6NGK3 116 aa12.56□□□□□ -0.4
CTSA-206ENST00000480961 C1orf137Q5JT78 98 aa12.56□□□□□ -0.4
CTSA-206ENST00000480961 PLA2G2DQ9UNK4 145 aa12.56□□□□□ -0.4
CTSA-206ENST00000480961 MIR7-3HGQ8N6C7 128 aa12.55□□□□□ -0.4
CTSA-206ENST00000480961 Q8NDZ9 215 aa12.55□□□□□ -0.4
CTSA-206ENST00000480961 IGKV2D-26A0A0A0MRZ7 120 aa12.54□□□□□ -0.4
CTSA-206ENST00000480961 NMUP48645 174 aa12.54□□□□□ -0.4
CTSA-206ENST00000480961 LBHQ53QV2 105 aaPredicted RBP12.54□□□□□ -0.4
CTSA-206ENST00000480961 MRPL55Q7Z7F7 128 aaKnown RBP12.54□□□□□ -0.4
CTSA-206ENST00000480961 C5orf52A6NGY3 159 aa12.53□□□□□ -0.4
CTSA-206ENST00000480961 RPL37AP8A6NKH3 93 aa12.53□□□□□ -0.4
CTSA-206ENST00000480961 DAND5Q8N907 189 aa12.53□□□□□ -0.4
CTSA-206ENST00000480961 NKAPP1Q8N9T2 125 aa12.53□□□□□ -0.4
CTSA-206ENST00000480961 LINC00167Q96N53 147 aa12.53□□□□□ -0.4
CTSA-206ENST00000480961 VPREB1P12018 145 aa12.52□□□□□ -0.41
CTSA-206ENST00000480961 TTTY13Q9BZ97 58 aa12.52□□□□□ -0.41
CTSA-206ENST00000480961 TP73-AS1Q9UF72 201 aa12.52□□□□□ -0.41
CTSA-206ENST00000480961 IGLV5-37A0A075B6J1 123 aa12.51□□□□□ -0.41
CTSA-206ENST00000480961 LINC00587B1AMM8 73 aa12.51□□□□□ -0.41
CTSA-206ENST00000480961 ANKRD39Q53RE8 183 aa12.51□□□□□ -0.41
CTSA-206ENST00000480961 A0A0J9YXY3 114 aa12.5□□□□□ -0.41
CTSA-206ENST00000480961 RPL24P83731 157 aaKnown RBP12.49□□□□□ -0.41
CTSA-206ENST00000480961 SRSF9Q13242 221 aaKnown RBP eCLIP12.48□□□□□ -0.41
CTSA-206ENST00000480961 BOD1L2Q8IYS8 172 aa12.48□□□□□ -0.41
CTSA-206ENST00000480961 HERC1Q15751 4861 aa12.48□□□□□ -0.41
CTSA-206ENST00000480961 IGLV7-43P04211 117 aa12.47□□□□□ -0.41
CTSA-206ENST00000480961 ADAMTSL4-AS1Q5T5F5 129 aa12.47□□□□□ -0.41
CTSA-206ENST00000480961 ZNF815PA8K554 130 aa12.46□□□□□ -0.41
CTSA-206ENST00000480961 IGKV2-28A0A075B6P5 120 aa12.45□□□□□ -0.42
CTSA-206ENST00000480961 IGKV2D-28P01615 120 aa12.45□□□□□ -0.42
CTSA-206ENST00000480961 NPC2P61916 151 aa12.44□□□□□ -0.42
CTSA-206ENST00000480961 SPINK6Q6UWN8 80 aa12.44□□□□□ -0.42
CTSA-206ENST00000480961 SCGB1D1O95968 90 aa12.43□□□□□ -0.42
CTSA-206ENST00000480961 AKR1D1P51857 326 aa12.43□□□□□ -0.42
CTSA-206ENST00000480961 NCR3O14931 201 aa12.42□□□□□ -0.42
CTSA-206ENST00000480961 TMA7Q9Y2S6 64 aaKnown RBP12.42□□□□□ -0.42
CTSA-206ENST00000480961 KRTAP29-1A8MX34 341 aaPredicted RBP12.41□□□□□ -0.42
CTSA-206ENST00000480961 J3QL48 77 aa12.41□□□□□ -0.42
CTSA-206ENST00000480961 EIF4EBP3O60516 100 aaPredicted RBP12.41□□□□□ -0.42
CTSA-206ENST00000480961 PCP2Q8IVA1 136 aa12.41□□□□□ -0.42
CTSA-206ENST00000480961 DMBT1Q9UGM3 2413 aaPredicted RBP12.4□□□□□ -0.42
CTSA-206ENST00000480961 IGLV1-50A0A075B6I6 118 aa12.4□□□□□ -0.42
CTSA-206ENST00000480961 M0R378 163 aa12.4□□□□□ -0.42
CTSA-206ENST00000480961 SOSTDC1Q6X4U4 206 aa12.4□□□□□ -0.42
CTSA-206ENST00000480961 LITAFQ99732 161 aa12.4□□□□□ -0.42
CTSA-206ENST00000480961 TMEM238C9JI98 176 aa12.39□□□□□ -0.43
CTSA-206ENST00000480961 BCE1O60756 84 aa12.38□□□□□ -0.43
CTSA-206ENST00000480961 OXTP01178 125 aa12.38□□□□□ -0.43
CTSA-206ENST00000480961 MIEN1Q9BRT3 115 aa12.38□□□□□ -0.43
CTSA-206ENST00000480961 LOC107984156A0A0G2JMH3 177 aa12.37□□□□□ -0.43
CTSA-206ENST00000480961 ARL17AQ8IVW1 177 aa12.37□□□□□ -0.43
CTSA-206ENST00000480961 TNXBP22105 4242 aa12.36□□□□□ -0.43
CTSA-206ENST00000480961 HSBP1L1C9JCN9 74 aa12.36□□□□□ -0.43
CTSA-206ENST00000480961 TIMM17BO60830 172 aa12.36□□□□□ -0.43
CTSA-206ENST00000480961 SCGB1D4Q6XE38 83 aa12.36□□□□□ -0.43
CTSA-206ENST00000480961 DIRC1Q969H9 104 aa12.35□□□□□ -0.43
CTSA-206ENST00000480961 ZNF861PO60384 105 aa12.34□□□□□ -0.43
CTSA-206ENST00000480961 LINC00308Q8TCZ7 52 aa12.34□□□□□ -0.43
CTSA-206ENST00000480961 TMEM126AQ9H061 195 aa12.34□□□□□ -0.43
CTSA-206ENST00000480961 REG3GQ6UW15 175 aa12.33□□□□□ -0.44
CTSA-206ENST00000480961 H0Y9J4 135 aa12.32□□□□□ -0.44
CTSA-206ENST00000480961 TRBV10-3A0A0K0K1G6 114 aa12.31□□□□□ -0.44
CTSA-206ENST00000480961 UBE2AP49459 152 aa12.31□□□□□ -0.44
CTSA-206ENST00000480961 RPL28P46779 137 aaKnown RBP12.3□□□□□ -0.44
CTSA-206ENST00000480961 NDUFC2O95298 119 aa12.29□□□□□ -0.44
CTSA-206ENST00000480961 MT1HL1P0DM35 61 aa12.29□□□□□ -0.44
CTSA-206ENST00000480961 PRLHP81277 87 aa12.29□□□□□ -0.44
CTSA-206ENST00000480961 FAM19A1Q7Z5A9 133 aa12.29□□□□□ -0.44
CTSA-206ENST00000480961 LINC01600Q96MT4 127 aa12.29□□□□□ -0.44
CTSA-206ENST00000480961 SPANXB1Q9NS25 103 aaPredicted RBP12.29□□□□□ -0.44
CTSA-206ENST00000480961 KRTAP13-1Q8IUC0 172 aa12.28□□□□□ -0.44
CTSA-206ENST00000480961 TRBV10-2A0A0K0K1G8 114 aa12.27□□□□□ -0.45
CTSA-206ENST00000480961 DDTP30046 118 aa12.27□□□□□ -0.45
CTSA-206ENST00000480961 SPANXDQ9BXN6 97 aa12.27□□□□□ -0.45
CTSA-206ENST00000480961 SPANXCQ9NY87 97 aa12.27□□□□□ -0.45
CTSA-206ENST00000480961 PRYO14603 147 aa12.25□□□□□ -0.45
CTSA-206ENST00000480961 JOSD1Q15040 202 aaPredicted RBP12.25□□□□□ -0.45
CTSA-206ENST00000480961 S100A7L2Q5SY68 101 aa12.25□□□□□ -0.45
CTSA-206ENST00000480961 KCNQ1DNQ9H478 68 aa12.25□□□□□ -0.45
CTSA-206ENST00000480961 MUSTN1Q8IVN3 82 aa12.23□□□□□ -0.45
CTSA-206ENST00000480961 PAM16Q9Y3D7 125 aa12.23□□□□□ -0.45
CTSA-206ENST00000480961 IGLV6-57P01721 117 aa12.22□□□□□ -0.45
CTSA-206ENST00000480961 KRTAP1-4P0C5Y4 121 aa12.22□□□□□ -0.45
CTSA-206ENST00000480961 PRR26Q8N8Z3 221 aa12.21□□□□□ -0.45
CTSA-206ENST00000480961 OR13C6PQ8NH95 151 aa12.21□□□□□ -0.45
CTSA-206ENST00000480961 SPRR1AP35321 89 aa12.2□□□□□ -0.46
CTSA-206ENST00000480961 KRTAP10-8P60410 259 aa12.2□□□□□ -0.46
CTSA-206ENST00000480961 SPATA45Q537H7 98 aa12.2□□□□□ -0.46
CTSA-206ENST00000480961 C14orf144Q96I85 54 aa12.2□□□□□ -0.46
CTSA-206ENST00000480961 VAMP8Q9BV40 100 aa12.2□□□□□ -0.46
CTSA-206ENST00000480961 ETDCA0A1B0GVM5 59 aa12.19□□□□□ -0.46
CTSA-206ENST00000480961 COX8AP10176 69 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms