RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 COX17Q14061 63 aa8.5□□□□□ -1.05
SNRNP200-204ENST00000480615 LINC00528Q8N1L1 170 aa8.5□□□□□ -1.05
SNRNP200-204ENST00000480615 DAND5Q8N907 189 aa8.5□□□□□ -1.05
SNRNP200-204ENST00000480615 MIR7-3HGQ8N6C7 128 aa8.48□□□□□ -1.05
SNRNP200-204ENST00000480615 C14orf144Q96I85 54 aa8.48□□□□□ -1.05
SNRNP200-204ENST00000480615 LINC00587B1AMM8 73 aa8.47□□□□□ -1.05
SNRNP200-204ENST00000480615 COX8AP10176 69 aa8.47□□□□□ -1.05
SNRNP200-204ENST00000480615 Q8N1X5 172 aa8.47□□□□□ -1.05
SNRNP200-204ENST00000480615 SND1-IT1Q9HBX3 110 aa8.47□□□□□ -1.05
SNRNP200-204ENST00000480615 HERC2O95714 4834 aa8.47□□□□□ -1.05
SNRNP200-204ENST00000480615 Q5VSD8 79 aa8.47□□□□□ -1.05
SNRNP200-204ENST00000480615 FAM229AH3BQW9 127 aa8.46□□□□□ -1.06
SNRNP200-204ENST00000480615 NPC2P61916 151 aa8.46□□□□□ -1.06
SNRNP200-204ENST00000480615 SERTAD4-AS1Q5TG53 156 aa8.46□□□□□ -1.06
SNRNP200-204ENST00000480615 LITAFQ99732 161 aa8.46□□□□□ -1.06
SNRNP200-204ENST00000480615 FAT1Q14517 4588 aa8.45□□□□□ -1.06
SNRNP200-204ENST00000480615 EPM2AB3EWF7 344 aa8.45□□□□□ -1.06
SNRNP200-204ENST00000480615 ADAMTSL4-AS1Q5T5F5 129 aa8.45□□□□□ -1.06
SNRNP200-204ENST00000480615 PHF5AQ7RTV0 110 aaKnown RBP8.45□□□□□ -1.06
SNRNP200-204ENST00000480615 KRTAP7-1Q8IUC3 87 aa8.45□□□□□ -1.06
SNRNP200-204ENST00000480615 BOD1L2Q8IYS8 172 aa8.45□□□□□ -1.06
SNRNP200-204ENST00000480615 KRTAP4-5Q9BYR2 181 aa8.45□□□□□ -1.06
SNRNP200-204ENST00000480615 TMEM238C9JI98 176 aa8.44□□□□□ -1.06
SNRNP200-204ENST00000480615 SRRM2Q9UQ35 2752 aaKnown RBP8.44□□□□□ -1.06
SNRNP200-204ENST00000480615 M0QXV9 152 aa8.43□□□□□ -1.06
SNRNP200-204ENST00000480615 TIMM17BO60830 172 aa8.43□□□□□ -1.06
SNRNP200-204ENST00000480615 SLC25A34Q6PIV7 304 aa8.43□□□□□ -1.06
SNRNP200-204ENST00000480615 C7orf33Q8WU49 177 aa8.43□□□□□ -1.06
SNRNP200-204ENST00000480615 TSTD3H0UI37 97 aa8.43□□□□□ -1.06
SNRNP200-204ENST00000480615 MIEN1Q9BRT3 115 aa8.43□□□□□ -1.06
SNRNP200-204ENST00000480615 RPL37AP61513 92 aaKnown RBP8.42□□□□□ -1.06
SNRNP200-204ENST00000480615 DLEU1O43261 78 aa8.41□□□□□ -1.06
SNRNP200-204ENST00000480615 EIF4EBP3O60516 100 aaPredicted RBP8.41□□□□□ -1.06
SNRNP200-204ENST00000480615 SOSTDC1Q6X4U4 206 aa8.41□□□□□ -1.06
SNRNP200-204ENST00000480615 Q8NDZ9 215 aa8.41□□□□□ -1.06
SNRNP200-204ENST00000480615 VPS13BQ7Z7G8 4022 aa8.41□□□□□ -1.06
SNRNP200-204ENST00000480615 GAGE10A6NGK3 116 aa8.4□□□□□ -1.06
SNRNP200-204ENST00000480615 SPANXDQ9BXN6 97 aa8.4□□□□□ -1.06
SNRNP200-204ENST00000480615 SPANXCQ9NY87 97 aa8.4□□□□□ -1.06
SNRNP200-204ENST00000480615 C22orf24Q9Y442 160 aa8.4□□□□□ -1.06
SNRNP200-204ENST00000480615 PLA2G1BP04054 148 aaKnown RBP8.4□□□□□ -1.07
SNRNP200-204ENST00000480615 DDTP30046 118 aa8.4□□□□□ -1.07
SNRNP200-204ENST00000480615 UBE2BP63146 152 aa8.4□□□□□ -1.07
SNRNP200-204ENST00000480615 NKAPP1Q8N9T2 125 aa8.4□□□□□ -1.07
SNRNP200-204ENST00000480615 C2orf91Q6ZV80 131 aa8.39□□□□□ -1.07
SNRNP200-204ENST00000480615 LINC00308Q8TCZ7 52 aa8.39□□□□□ -1.07
SNRNP200-204ENST00000480615 VPREB1P12018 145 aa8.38□□□□□ -1.07
SNRNP200-204ENST00000480615 SRSF9Q13242 221 aaKnown RBP eCLIP8.38□□□□□ -1.07
SNRNP200-204ENST00000480615 KRTAP11-1Q8IUC1 163 aa8.38□□□□□ -1.07
SNRNP200-204ENST00000480615 RPL37AP8A6NKH3 93 aa8.37□□□□□ -1.07
SNRNP200-204ENST00000480615 NCR3O14931 201 aa8.37□□□□□ -1.07
SNRNP200-204ENST00000480615 PRR3P79522 188 aaKnown RBP8.37□□□□□ -1.07
SNRNP200-204ENST00000480615 MRPL55Q7Z7F7 128 aaKnown RBP8.37□□□□□ -1.07
SNRNP200-204ENST00000480615 SPANXB1Q9NS25 103 aaPredicted RBP8.37□□□□□ -1.07
SNRNP200-204ENST00000480615 UQCR10Q9UDW1 63 aa8.37□□□□□ -1.07
SNRNP200-204ENST00000480615 PLA2G2DQ9UNK4 145 aa8.36□□□□□ -1.07
SNRNP200-204ENST00000480615 RPL24P83731 157 aaKnown RBP8.36□□□□□ -1.07
SNRNP200-204ENST00000480615 HIST1H4GQ99525 98 aa8.36□□□□□ -1.07
SNRNP200-204ENST00000480615 PSORS1C2Q9UIG4 136 aa8.36□□□□□ -1.07
SNRNP200-204ENST00000480615 LOC107984156A0A0G2JMH3 177 aa8.35□□□□□ -1.07
SNRNP200-204ENST00000480615 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
SNRNP200-204ENST00000480615 LBHQ53QV2 105 aaPredicted RBP8.35□□□□□ -1.07
SNRNP200-204ENST00000480615 Q6ZVH6 145 aa8.35□□□□□ -1.07
SNRNP200-204ENST00000480615 MUSTN1Q8IVN3 82 aa8.35□□□□□ -1.07
SNRNP200-204ENST00000480615 ARL17AQ8IVW1 177 aa8.35□□□□□ -1.07
SNRNP200-204ENST00000480615 LINC00167Q96N53 147 aa8.35□□□□□ -1.07
SNRNP200-204ENST00000480615 HIGD1BQ9P298 99 aa8.35□□□□□ -1.07
SNRNP200-204ENST00000480615 ABCA13Q86UQ4 5058 aa8.34□□□□□ -1.07
SNRNP200-204ENST00000480615 IGLV5-37A0A075B6J1 123 aa8.34□□□□□ -1.07
SNRNP200-204ENST00000480615 IGKV2-28A0A075B6P5 120 aa8.34□□□□□ -1.07
SNRNP200-204ENST00000480615 IGKV2D-28P01615 120 aa8.34□□□□□ -1.07
SNRNP200-204ENST00000480615 IFITM1P13164 125 aa8.33□□□□□ -1.08
SNRNP200-204ENST00000480615 C1orf137Q5JT78 98 aa8.33□□□□□ -1.08
SNRNP200-204ENST00000480615 COPS9Q8WXC6 57 aa8.33□□□□□ -1.08
SNRNP200-204ENST00000480615 HNRNPA3P51991 378 aaKnown RBP8.32□□□□□ -1.08
SNRNP200-204ENST00000480615 PCLOQ9Y6V0 5065 aa8.32□□□□□ -1.08
SNRNP200-204ENST00000480615 NDUFC2O95298 119 aa8.32□□□□□ -1.08
SNRNP200-204ENST00000480615 INAFM2P0DMQ5 153 aa8.31□□□□□ -1.08
SNRNP200-204ENST00000480615 M0R378 163 aa8.29□□□□□ -1.08
SNRNP200-204ENST00000480615 A4D1N5 150 aa8.29□□□□□ -1.08
SNRNP200-204ENST00000480615 PPDPFQ9H3Y8 114 aa8.29□□□□□ -1.08
SNRNP200-204ENST00000480615 IGLV1-50A0A075B6I6 118 aa8.28□□□□□ -1.08
SNRNP200-204ENST00000480615 TRBV10-3A0A0K0K1G6 114 aa8.28□□□□□ -1.08
SNRNP200-204ENST00000480615 TRBV10-2A0A0K0K1G8 114 aa8.28□□□□□ -1.08
SNRNP200-204ENST00000480615 CTAG1AP78358 180 aa8.28□□□□□ -1.08
SNRNP200-204ENST00000480615 HSD52Q0P140 79 aa8.28□□□□□ -1.08
SNRNP200-204ENST00000480615 CEND1Q8N111 149 aa8.28□□□□□ -1.08
SNRNP200-204ENST00000480615 LINC00337Q8N6G1 96 aa8.28□□□□□ -1.08
SNRNP200-204ENST00000480615 FLG2Q5D862 2391 aaPredicted RBP8.27□□□□□ -1.09
SNRNP200-204ENST00000480615 TAL2Q16559 108 aa8.27□□□□□ -1.09
SNRNP200-204ENST00000480615 S100A7L2Q5SY68 101 aa8.27□□□□□ -1.09
SNRNP200-204ENST00000480615 IGLV7-43P04211 117 aa8.26□□□□□ -1.09
SNRNP200-204ENST00000480615 FXYD2P54710 66 aa8.26□□□□□ -1.09
SNRNP200-204ENST00000480615 OR13C6PQ8NH95 151 aa8.26□□□□□ -1.09
SNRNP200-204ENST00000480615 SNHG12Q9BXW3 62 aa8.26□□□□□ -1.09
SNRNP200-204ENST00000480615 A6NDN8 102 aa8.24□□□□□ -1.09
SNRNP200-204ENST00000480615 IGLV6-57P01721 117 aa8.24□□□□□ -1.09
SNRNP200-204ENST00000480615 REG3GQ6UW15 175 aa8.24□□□□□ -1.09
SNRNP200-204ENST00000480615 TMEM126AQ9H061 195 aa8.24□□□□□ -1.09
SNRNP200-204ENST00000480615 BCE1O60756 84 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms