RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 FLG2Q5D862 2391 aaPredicted RBP6.74□□□□□ -1.33
ATG4B-219ENST00000479941 PRR3P79522 188 aaKnown RBP6.73□□□□□ -1.33
ATG4B-219ENST00000479941 SERTAD4-AS1Q5TG53 156 aa6.73□□□□□ -1.33
ATG4B-219ENST00000479941 SND1-IT1Q9HBX3 110 aa6.73□□□□□ -1.33
ATG4B-219ENST00000479941 TP73-AS1Q9UF72 201 aa6.73□□□□□ -1.33
ATG4B-219ENST00000479941 C22orf24Q9Y442 160 aa6.73□□□□□ -1.33
ATG4B-219ENST00000479941 C5orf52A6NGY3 159 aa6.72□□□□□ -1.33
ATG4B-219ENST00000479941 SMIM13P0DJ93 91 aa6.72□□□□□ -1.33
ATG4B-219ENST00000479941 LBHQ53QV2 105 aaPredicted RBP6.72□□□□□ -1.33
ATG4B-219ENST00000479941 IGLV5-37A0A075B6J1 123 aa6.71□□□□□ -1.34
ATG4B-219ENST00000479941 A0A0U1RRA0 63 aa6.71□□□□□ -1.34
ATG4B-219ENST00000479941 UBE2BP63146 152 aa6.71□□□□□ -1.34
ATG4B-219ENST00000479941 MRPL55Q7Z7F7 128 aaKnown RBP6.71□□□□□ -1.34
ATG4B-219ENST00000479941 PSORS1C2Q9UIG4 136 aa6.71□□□□□ -1.34
ATG4B-219ENST00000479941 RPL24P83731 157 aaKnown RBP6.7□□□□□ -1.34
ATG4B-219ENST00000479941 NKAPP1Q8N9T2 125 aa6.7□□□□□ -1.34
ATG4B-219ENST00000479941 HERC1Q15751 4861 aa6.69□□□□□ -1.34
ATG4B-219ENST00000479941 HNRNPA3P51991 378 aaKnown RBP6.69□□□□□ -1.34
ATG4B-219ENST00000479941 C1orf137Q5JT78 98 aa6.69□□□□□ -1.34
ATG4B-219ENST00000479941 MIR7-3HGQ8N6C7 128 aa6.69□□□□□ -1.34
ATG4B-219ENST00000479941 A0A0J9YXY3 114 aa6.68□□□□□ -1.34
ATG4B-219ENST00000479941 VPREB1P12018 145 aa6.68□□□□□ -1.34
ATG4B-219ENST00000479941 LINC00167Q96N53 147 aa6.68□□□□□ -1.34
ATG4B-219ENST00000479941 IGKV2D-26A0A0A0MRZ7 120 aa6.67□□□□□ -1.34
ATG4B-219ENST00000479941 KRTAP11-1Q8IUC1 163 aa6.67□□□□□ -1.34
ATG4B-219ENST00000479941 ATOH7Q8N100 152 aa6.67□□□□□ -1.34
ATG4B-219ENST00000479941 DMBT1Q9UGM3 2413 aaPredicted RBP6.67□□□□□ -1.34
ATG4B-219ENST00000479941 ZNF815PA8K554 130 aa6.66□□□□□ -1.34
ATG4B-219ENST00000479941 SRSF9Q13242 221 aaKnown RBP eCLIP6.66□□□□□ -1.34
ATG4B-219ENST00000479941 ANKRD39Q53RE8 183 aa6.66□□□□□ -1.34
ATG4B-219ENST00000479941 SPINK6Q6UWN8 80 aa6.66□□□□□ -1.34
ATG4B-219ENST00000479941 LOC107984156A0A0G2JMH3 177 aa6.65□□□□□ -1.34
ATG4B-219ENST00000479941 GAGE10A6NGK3 116 aa6.65□□□□□ -1.34
ATG4B-219ENST00000479941 IGLV7-43P04211 117 aa6.65□□□□□ -1.34
ATG4B-219ENST00000479941 ARL17AQ8IVW1 177 aa6.65□□□□□ -1.34
ATG4B-219ENST00000479941 BOD1L2Q8IYS8 172 aa6.65□□□□□ -1.34
ATG4B-219ENST00000479941 DAND5Q8N907 189 aa6.65□□□□□ -1.34
ATG4B-219ENST00000479941 MIEN1Q9BRT3 115 aa6.65□□□□□ -1.34
ATG4B-219ENST00000479941 RPL37AP8A6NKH3 93 aa6.64□□□□□ -1.35
ATG4B-219ENST00000479941 HSBP1L1C9JCN9 74 aa6.64□□□□□ -1.35
ATG4B-219ENST00000479941 TIMM17BO60830 172 aa6.64□□□□□ -1.35
ATG4B-219ENST00000479941 SCGB1D1O95968 90 aa6.64□□□□□ -1.35
ATG4B-219ENST00000479941 Q8NDZ9 215 aa6.64□□□□□ -1.35
ATG4B-219ENST00000479941 TTTY13Q9BZ97 58 aa6.64□□□□□ -1.35
ATG4B-219ENST00000479941 IGLV1-50A0A075B6I6 118 aa6.63□□□□□ -1.35
ATG4B-219ENST00000479941 KRTAP29-1A8MX34 341 aaPredicted RBP6.63□□□□□ -1.35
ATG4B-219ENST00000479941 M0R378 163 aa6.63□□□□□ -1.35
ATG4B-219ENST00000479941 OXTP01178 125 aa6.63□□□□□ -1.35
ATG4B-219ENST00000479941 IGKV2-28A0A075B6P5 120 aa6.62□□□□□ -1.35
ATG4B-219ENST00000479941 IGKV2D-28P01615 120 aa6.62□□□□□ -1.35
ATG4B-219ENST00000479941 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
ATG4B-219ENST00000479941 SCGB1D4Q6XE38 83 aa6.62□□□□□ -1.35
ATG4B-219ENST00000479941 LITAFQ99732 161 aa6.62□□□□□ -1.35
ATG4B-219ENST00000479941 BCE1O60756 84 aa6.61□□□□□ -1.35
ATG4B-219ENST00000479941 NDUFC2O95298 119 aa6.61□□□□□ -1.35
ATG4B-219ENST00000479941 REG3GQ6UW15 175 aa6.61□□□□□ -1.35
ATG4B-219ENST00000479941 PCP2Q8IVA1 136 aa6.61□□□□□ -1.35
ATG4B-219ENST00000479941 TNXBP22105 4242 aa6.61□□□□□ -1.35
ATG4B-219ENST00000479941 TRBV10-2A0A0K0K1G8 114 aa6.6□□□□□ -1.35
ATG4B-219ENST00000479941 TMEM238C9JI98 176 aa6.6□□□□□ -1.35
ATG4B-219ENST00000479941 ZNF861PO60384 105 aa6.6□□□□□ -1.35
ATG4B-219ENST00000479941 DIRC1Q969H9 104 aa6.6□□□□□ -1.35
ATG4B-219ENST00000479941 J3QL48 77 aa6.59□□□□□ -1.35
ATG4B-219ENST00000479941 NCR3O14931 201 aa6.59□□□□□ -1.35
ATG4B-219ENST00000479941 RPL28P46779 137 aaKnown RBP6.59□□□□□ -1.35
ATG4B-219ENST00000479941 NPC2P61916 151 aa6.59□□□□□ -1.35
ATG4B-219ENST00000479941 SOSTDC1Q6X4U4 206 aa6.59□□□□□ -1.35
ATG4B-219ENST00000479941 LINC00308Q8TCZ7 52 aa6.59□□□□□ -1.35
ATG4B-219ENST00000479941 TMEM126AQ9H061 195 aa6.59□□□□□ -1.35
ATG4B-219ENST00000479941 SPANXB1Q9NS25 103 aaPredicted RBP6.59□□□□□ -1.35
ATG4B-219ENST00000479941 H0Y9J4 135 aa6.58□□□□□ -1.36
ATG4B-219ENST00000479941 S100A12P80511 92 aa6.58□□□□□ -1.36
ATG4B-219ENST00000479941 Q6ZVH6 145 aa6.58□□□□□ -1.36
ATG4B-219ENST00000479941 COPS9Q8WXC6 57 aa6.58□□□□□ -1.36
ATG4B-219ENST00000479941 SPANXDQ9BXN6 97 aa6.58□□□□□ -1.36
ATG4B-219ENST00000479941 SPANXCQ9NY87 97 aa6.58□□□□□ -1.36
ATG4B-219ENST00000479941 TMA7Q9Y2S6 64 aaKnown RBP6.58□□□□□ -1.36
ATG4B-219ENST00000479941 PRYO14603 147 aa6.57□□□□□ -1.36
ATG4B-219ENST00000479941 EIF4EBP3O60516 100 aaPredicted RBP6.57□□□□□ -1.36
ATG4B-219ENST00000479941 JOSD1Q15040 202 aaPredicted RBP6.57□□□□□ -1.36
ATG4B-219ENST00000479941 KCNQ1DNQ9H478 68 aa6.57□□□□□ -1.36
ATG4B-219ENST00000479941 TRBV10-3A0A0K0K1G6 114 aa6.56□□□□□ -1.36
ATG4B-219ENST00000479941 IFITM1P13164 125 aa6.56□□□□□ -1.36
ATG4B-219ENST00000479941 DDTP30046 118 aa6.56□□□□□ -1.36
ATG4B-219ENST00000479941 UBE2AP49459 152 aa6.56□□□□□ -1.36
ATG4B-219ENST00000479941 S100A7L2Q5SY68 101 aa6.56□□□□□ -1.36
ATG4B-219ENST00000479941 FAM19A1Q7Z5A9 133 aa6.56□□□□□ -1.36
ATG4B-219ENST00000479941 LINC01600Q96MT4 127 aa6.56□□□□□ -1.36
ATG4B-219ENST00000479941 PPDPFQ9H3Y8 114 aa6.56□□□□□ -1.36
ATG4B-219ENST00000479941 KRTAP13-1Q8IUC0 172 aa6.55□□□□□ -1.36
ATG4B-219ENST00000479941 IGLV6-57P01721 117 aa6.54□□□□□ -1.36
ATG4B-219ENST00000479941 SPRR1AP35321 89 aa6.54□□□□□ -1.36
ATG4B-219ENST00000479941 LINC00518Q8N0U6 118 aa6.54□□□□□ -1.36
ATG4B-219ENST00000479941 COX8AP10176 69 aa6.53□□□□□ -1.36
ATG4B-219ENST00000479941 PRLHP81277 87 aa6.53□□□□□ -1.36
ATG4B-219ENST00000479941 LINC00337Q8N6G1 96 aa6.53□□□□□ -1.36
ATG4B-219ENST00000479941 VAMP8Q9BV40 100 aa6.53□□□□□ -1.36
ATG4B-219ENST00000479941 CBY1Q9Y3M2 126 aa6.53□□□□□ -1.36
ATG4B-219ENST00000479941 ETDCA0A1B0GVM5 59 aa6.52□□□□□ -1.37
ATG4B-219ENST00000479941 DLEU1O43261 78 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms