RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 COX17Q14061 63 aa8.95□□□□□ -0.98
DDX56-210ENST00000479440 Q8N377 158 aa8.93□□□□□ -0.98
DDX56-210ENST00000479440 ADCYAP1P18509 176 aa8.92□□□□□ -0.98
DDX56-210ENST00000479440 Q8NDZ9 215 aa8.92□□□□□ -0.98
DDX56-210ENST00000479440 CST9LQ9H4G1 147 aa8.92□□□□□ -0.98
DDX56-210ENST00000479440 SLC25A20O43772 301 aa8.91□□□□□ -0.98
DDX56-210ENST00000479440 PMVKQ15126 192 aa8.91□□□□□ -0.98
DDX56-210ENST00000479440 KRTAP19-2Q3LHN2 52 aa8.91□□□□□ -0.98
DDX56-210ENST00000479440 IGLV5-39A0A0G2JS06 123 aa8.9□□□□□ -0.98
DDX56-210ENST00000479440 PRYO14603 147 aa8.9□□□□□ -0.98
DDX56-210ENST00000479440 SFTA2Q6UW10 78 aa8.9□□□□□ -0.98
DDX56-210ENST00000479440 MOBPQ13875 183 aa8.89□□□□□ -0.99
DDX56-210ENST00000479440 LINC00483Q53H64 154 aa8.89□□□□□ -0.99
DDX56-210ENST00000479440 ANAPC16Q96DE5 110 aa8.88□□□□□ -0.99
DDX56-210ENST00000479440 LORP23490 312 aaPredicted RBP8.87□□□□□ -0.99
DDX56-210ENST00000479440 SMCR5Q8TEV8 140 aa8.87□□□□□ -0.99
DDX56-210ENST00000479440 ZNF625Q96I27 306 aaPredicted RBP8.87□□□□□ -0.99
DDX56-210ENST00000479440 IGLV9-49A0A0B4J1Y8 123 aa8.86□□□□□ -0.99
DDX56-210ENST00000479440 MT-ND4LP03901 98 aa8.86□□□□□ -0.99
DDX56-210ENST00000479440 IGLC3P0DOY3 106 aa8.86□□□□□ -0.99
DDX56-210ENST00000479440 SSBP3-AS1Q7Z2R9 100 aa8.86□□□□□ -0.99
DDX56-210ENST00000479440 ETDCA0A1B0GVM5 59 aa8.85□□□□□ -0.99
DDX56-210ENST00000479440 KRTAP10-6P60371 365 aaPredicted RBP8.85□□□□□ -0.99
DDX56-210ENST00000479440 ZNF22P17026 224 aaPredicted RBP8.84□□□□□ -0.99
DDX56-210ENST00000479440 SPRR1AP35321 89 aa8.84□□□□□ -0.99
DDX56-210ENST00000479440 GAGE2AQ6NT46 116 aa8.84□□□□□ -0.99
DDX56-210ENST00000479440 IGLV8-61A0A075B6I0 122 aa8.83□□□□□ -1
DDX56-210ENST00000479440 LINC01546A6NGU7 62 aa8.83□□□□□ -1
DDX56-210ENST00000479440 KIAA1644Q3SXP7 199 aa8.83□□□□□ -1
DDX56-210ENST00000479440 LINC00158P58513 81 aa8.82□□□□□ -1
DDX56-210ENST00000479440 hCG_2014768A0A024R1R8 64 aa8.81□□□□□ -1
DDX56-210ENST00000479440 PCOTHQ58A44 107 aa8.81□□□□□ -1
DDX56-210ENST00000479440 KCNQ1DNQ9H478 68 aa8.81□□□□□ -1
DDX56-210ENST00000479440 M0R2T5 61 aa8.8□□□□□ -1
DDX56-210ENST00000479440 S100A12P80511 92 aa8.8□□□□□ -1
DDX56-210ENST00000479440 KRTAP4-16G5E9R7 235 aaPredicted RBP8.79□□□□□ -1
DDX56-210ENST00000479440 NCR3O14931 201 aa8.79□□□□□ -1
DDX56-210ENST00000479440 NDUFA6P56556 154 aa8.79□□□□□ -1
DDX56-210ENST00000479440 FA2HQ7L5A8 372 aa8.79□□□□□ -1
DDX56-210ENST00000479440 SMCO4Q9NRQ5 59 aa8.79□□□□□ -1
DDX56-210ENST00000479440 KRTAP9-7A8MTY7 169 aa8.77□□□□□ -1.01
DDX56-210ENST00000479440 ATP6V1G1O75348 118 aa8.77□□□□□ -1.01
DDX56-210ENST00000479440 C9orf153Q5TBE3 101 aa8.77□□□□□ -1.01
DDX56-210ENST00000479440 BOD1L2Q8IYS8 172 aa8.77□□□□□ -1.01
DDX56-210ENST00000479440 A0A0U1RRA0 63 aa8.76□□□□□ -1.01
DDX56-210ENST00000479440 TMEM170BQ5T4T1 132 aa8.76□□□□□ -1.01
DDX56-210ENST00000479440 TRAV9-1A0A075B6T8 112 aa8.75□□□□□ -1.01
DDX56-210ENST00000479440 TRBV10-3A0A0K0K1G6 114 aa8.74□□□□□ -1.01
DDX56-210ENST00000479440 B5MCH6 92 aa8.74□□□□□ -1.01
DDX56-210ENST00000479440 C11orf86A6NJI1 115 aa8.73□□□□□ -1.01
DDX56-210ENST00000479440 ERC2-IT1O76042 136 aa8.73□□□□□ -1.01
DDX56-210ENST00000479440 LIMD2Q9BT23 127 aa8.73□□□□□ -1.01
DDX56-210ENST00000479440 MEIG1Q5JSS6 88 aa8.72□□□□□ -1.01
DDX56-210ENST00000479440 C9orf92A6NGG3 77 aa8.71□□□□□ -1.02
DDX56-210ENST00000479440 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.71□□□□□ -1.02
DDX56-210ENST00000479440 SMIM13P0DJ93 91 aa8.71□□□□□ -1.02
DDX56-210ENST00000479440 COX6B2Q6YFQ2 88 aa8.71□□□□□ -1.02
DDX56-210ENST00000479440 Q6ZRX8 168 aa8.7□□□□□ -1.02
DDX56-210ENST00000479440 MIR7-3HGQ8N6C7 128 aa8.7□□□□□ -1.02
DDX56-210ENST00000479440 Q9BRP9 147 aa8.69□□□□□ -1.02
DDX56-210ENST00000479440 A0A096LNJ9 63 aa8.68□□□□□ -1.02
DDX56-210ENST00000479440 HBDP02042 147 aa8.68□□□□□ -1.02
DDX56-210ENST00000479440 BAGE3Q86Y29 109 aa8.68□□□□□ -1.02
DDX56-210ENST00000479440 LINC00587B1AMM8 73 aa8.67□□□□□ -1.02
DDX56-210ENST00000479440 DDTP30046 118 aa8.67□□□□□ -1.02
DDX56-210ENST00000479440 HERV-K104P63124 156 aa8.67□□□□□ -1.02
DDX56-210ENST00000479440 JOSD1Q15040 202 aaPredicted RBP8.66□□□□□ -1.02
DDX56-210ENST00000479440 COX19Q49B96 90 aa8.66□□□□□ -1.02
DDX56-210ENST00000479440 S100PP25815 95 aa8.65□□□□□ -1.02
DDX56-210ENST00000479440 MAP1LC3CQ9BXW4 147 aa8.65□□□□□ -1.02
DDX56-210ENST00000479440 TRBV10-2A0A0K0K1G8 114 aa8.64□□□□□ -1.03
DDX56-210ENST00000479440 TMEM223A0PJW6 202 aa8.64□□□□□ -1.03
DDX56-210ENST00000479440 IGLV6-57P01721 117 aa8.64□□□□□ -1.03
DDX56-210ENST00000479440 CHTOPQ9Y3Y2 248 aaKnown RBP8.64□□□□□ -1.03
DDX56-210ENST00000479440 FABP9Q0Z7S8 132 aa8.63□□□□□ -1.03
DDX56-210ENST00000479440 FLGP20930 4061 aaPredicted RBP8.62□□□□□ -1.03
DDX56-210ENST00000479440 LINC00614P0C842 121 aa8.61□□□□□ -1.03
DDX56-210ENST00000479440 PMCHL1Q16048 86 aa8.61□□□□□ -1.03
DDX56-210ENST00000479440 HRCT1Q6UXD1 115 aa8.61□□□□□ -1.03
DDX56-210ENST00000479440 C5orf52A6NGY3 159 aa8.6□□□□□ -1.03
DDX56-210ENST00000479440 SPANXB1Q9NS25 103 aaPredicted RBP8.6□□□□□ -1.03
DDX56-210ENST00000479440 TRAV23DV6A0A075B6W5 121 aa8.59□□□□□ -1.03
DDX56-210ENST00000479440 S100A7L2Q5SY68 101 aa8.59□□□□□ -1.03
DDX56-210ENST00000479440 SLC25A34Q6PIV7 304 aa8.59□□□□□ -1.03
DDX56-210ENST00000479440 URB1-AS1Q96HZ7 61 aa8.59□□□□□ -1.03
DDX56-210ENST00000479440 SEC11CQ9BY50 192 aa8.59□□□□□ -1.03
DDX56-210ENST00000479440 MYMXA0A1B0GTQ4 84 aa8.58□□□□□ -1.04
DDX56-210ENST00000479440 ST20-AS1Q8NBB2 130 aa8.58□□□□□ -1.04
DDX56-210ENST00000479440 MIEN1Q9BRT3 115 aa8.58□□□□□ -1.04
DDX56-210ENST00000479440 LOC107984156A0A0G2JMH3 177 aa8.57□□□□□ -1.04
DDX56-210ENST00000479440 RPL37P61927 97 aaKnown RBP8.57□□□□□ -1.04
DDX56-210ENST00000479440 ARL17AQ8IVW1 177 aa8.57□□□□□ -1.04
DDX56-210ENST00000479440 C18orf32Q8TCD1 76 aa8.57□□□□□ -1.04
DDX56-210ENST00000479440 TRAV12-1A0A0B4J245 112 aa8.56□□□□□ -1.04
DDX56-210ENST00000479440 COMMD7Q86VX2 200 aa8.55□□□□□ -1.04
DDX56-210ENST00000479440 ZNF73O43830 326 aaPredicted RBP8.54□□□□□ -1.04
DDX56-210ENST00000479440 USH2AO75445 5202 aa8.54□□□□□ -1.04
DDX56-210ENST00000479440 NDUFC2O95298 119 aa8.53□□□□□ -1.04
DDX56-210ENST00000479440 SPRR1BP22528 89 aa8.53□□□□□ -1.04
DDX56-210ENST00000479440 HINT1P49773 126 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms