RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 LINC00643Q86TS7 51 aa18.65■□□□□ 0.58
CHKB-208ENST00000479003 SDIM1Q6ZPB5 146 aa18.63■□□□□ 0.57
CHKB-208ENST00000479003 Q6ZTC4 211 aa18.63■□□□□ 0.57
CHKB-208ENST00000479003 NANOS2P60321 138 aaKnown RBP18.62■□□□□ 0.57
CHKB-208ENST00000479003 KLK5Q9Y337 293 aaPredicted RBP18.62■□□□□ 0.57
CHKB-208ENST00000479003 SMCR5Q8TEV8 140 aa18.62■□□□□ 0.57
CHKB-208ENST00000479003 PRR3P79522 188 aaKnown RBP18.61■□□□□ 0.57
CHKB-208ENST00000479003 C9orf116Q5BN46 136 aaPredicted RBP18.6■□□□□ 0.57
CHKB-208ENST00000479003 OBSCN-AS1Q96MR7 158 aa18.6■□□□□ 0.57
CHKB-208ENST00000479003 PRR34Q9NV39 138 aa18.6■□□□□ 0.57
CHKB-208ENST00000479003 UQCRQO14949 82 aa18.59■□□□□ 0.57
CHKB-208ENST00000479003 C3orf22Q8N5N4 141 aa18.59■□□□□ 0.57
CHKB-208ENST00000479003 FAM236AA0A1B0GUQ0 79 aa18.58■□□□□ 0.57
CHKB-208ENST00000479003 FAM236BA0A1B0GV22 79 aa18.58■□□□□ 0.57
CHKB-208ENST00000479003 C9orf129Q5T035 196 aaKnown RBP18.57■□□□□ 0.56
CHKB-208ENST00000479003 SPAG11BQ08648 103 aa18.56■□□□□ 0.56
CHKB-208ENST00000479003 GAGE2AQ6NT46 116 aa18.56■□□□□ 0.56
CHKB-208ENST00000479003 C11orf45Q8TAV5 145 aa18.56■□□□□ 0.56
CHKB-208ENST00000479003 LINC00167Q96N53 147 aa18.56■□□□□ 0.56
CHKB-208ENST00000479003 KLK12Q9UKR0 248 aa18.56■□□□□ 0.56
CHKB-208ENST00000479003 A0A1B0GX51 115 aa18.55■□□□□ 0.56
CHKB-208ENST00000479003 MUC7Q8TAX7 377 aa18.55■□□□□ 0.56
CHKB-208ENST00000479003 COL7A1Q02388 2944 aa18.55■□□□□ 0.56
CHKB-208ENST00000479003 ORMDL1Q9P0S3 153 aa18.54■□□□□ 0.56
CHKB-208ENST00000479003 SLPIP03973 132 aa18.53■□□□□ 0.56
CHKB-208ENST00000479003 LYPD5Q6UWN5 251 aa18.53■□□□□ 0.56
CHKB-208ENST00000479003 C6orf223Q8N319 242 aa18.53■□□□□ 0.56
CHKB-208ENST00000479003 LINC00526Q96FQ7 95 aa18.53■□□□□ 0.56
CHKB-208ENST00000479003 DNAH9Q9NYC9 4486 aa18.53■□□□□ 0.56
CHKB-208ENST00000479003 C10orf25Q5T742 122 aa18.53■□□□□ 0.56
CHKB-208ENST00000479003 ENHOQ6UWT2 76 aa18.53■□□□□ 0.56
CHKB-208ENST00000479003 UNQ6190/PRO20217Q6UXQ8 127 aa18.53■□□□□ 0.56
CHKB-208ENST00000479003 KRTAP21-3Q3LHN1 58 aa18.52■□□□□ 0.56
CHKB-208ENST00000479003 C9orf153Q5TBE3 101 aa18.52■□□□□ 0.56
CHKB-208ENST00000479003 Q8NDZ9 215 aa18.52■□□□□ 0.55
CHKB-208ENST00000479003 C14orf132Q9NPU4 83 aa18.51■□□□□ 0.55
CHKB-208ENST00000479003 Q8N814 137 aa18.49■□□□□ 0.55
CHKB-208ENST00000479003 NCR3O14931 201 aa18.48■□□□□ 0.55
CHKB-208ENST00000479003 B9D2Q9BPU9 175 aa18.47■□□□□ 0.55
CHKB-208ENST00000479003 DEFB131BA0A096LNP1 70 aa18.46■□□□□ 0.55
CHKB-208ENST00000479003 STAB2Q8WWQ8 2551 aa18.46■□□□□ 0.54
CHKB-208ENST00000479003 H3BNG1 76 aa18.45■□□□□ 0.54
CHKB-208ENST00000479003 GVQW2A0A096LPI5 108 aaPredicted RBP18.44■□□□□ 0.54
CHKB-208ENST00000479003 S100A7L2Q5SY68 101 aa18.43■□□□□ 0.54
CHKB-208ENST00000479003 MEGF8Q7Z7M0 2845 aa18.43■□□□□ 0.54
CHKB-208ENST00000479003 COX7CP15954 63 aa18.43■□□□□ 0.54
CHKB-208ENST00000479003 PRKDCP78527 4128 aaKnown RBP18.42■□□□□ 0.54
CHKB-208ENST00000479003 C6orf99Q4VX62 202 aa18.42■□□□□ 0.54
CHKB-208ENST00000479003 ATOX1O00244 68 aa18.41■□□□□ 0.54
CHKB-208ENST00000479003 CRYGAP11844 174 aa18.4■□□□□ 0.54
CHKB-208ENST00000479003 HIST1H4AP62805 103 aaKnown RBP18.4■□□□□ 0.54
CHKB-208ENST00000479003 J3KT08 172 aa18.39■□□□□ 0.53
CHKB-208ENST00000479003 RPS28P62857 69 aaKnown RBP18.39■□□□□ 0.53
CHKB-208ENST00000479003 TMEM256-PLSCR3K7ERE1 68 aa18.38■□□□□ 0.53
CHKB-208ENST00000479003 WFDC10BQ8IUB3 73 aa18.38■□□□□ 0.53
CHKB-208ENST00000479003 C6orf48Q9UBA6 75 aa18.37■□□□□ 0.53
CHKB-208ENST00000479003 JMJD7-PLA2G4BH0Y9G9 81 aa18.36■□□□□ 0.53
CHKB-208ENST00000479003 IGLV6-57P01721 117 aa18.36■□□□□ 0.53
CHKB-208ENST00000479003 LINC00575Q6W349 94 aa18.36■□□□□ 0.53
CHKB-208ENST00000479003 TRAV10A0A0B4J240 114 aa18.35■□□□□ 0.53
CHKB-208ENST00000479003 LINC00846Q9NV44 126 aa18.34■□□□□ 0.53
CHKB-208ENST00000479003 CCKP06307 115 aa18.33■□□□□ 0.52
CHKB-208ENST00000479003 RPL18AQ02543 176 aaKnown RBP18.32■□□□□ 0.52
CHKB-208ENST00000479003 KRTAP26-1Q6PEX3 210 aa18.32■□□□□ 0.52
CHKB-208ENST00000479003 C2orf48Q96LS8 159 aa18.31■□□□□ 0.52
CHKB-208ENST00000479003 Q6JHZ5 121 aa18.29■□□□□ 0.52
CHKB-208ENST00000479003 C5orf47Q569G3 176 aa18.29■□□□□ 0.52
CHKB-208ENST00000479003 hADV29S1A0JD25 119 aa18.28■□□□□ 0.52
CHKB-208ENST00000479003 ESRGQ1W209 222 aa18.28■□□□□ 0.52
CHKB-208ENST00000479003 ZNF561-AS1K7EIQ3 104 aa18.27■□□□□ 0.52
CHKB-208ENST00000479003 XAGE1AQ9HD64 81 aa18.25■□□□□ 0.51
CHKB-208ENST00000479003 HIGD2BQ4VC39 106 aa18.25■□□□□ 0.51
CHKB-208ENST00000479003 CAMK2N2Q96S95 79 aa18.25■□□□□ 0.51
CHKB-208ENST00000479003 TRBV10-3A0A0K0K1G6 114 aa18.23■□□□□ 0.51
CHKB-208ENST00000479003 TMEM258P61165 79 aa18.21■□□□□ 0.51
CHKB-208ENST00000479003 C15orf56Q8N910 161 aa18.21■□□□□ 0.51
CHKB-208ENST00000479003 TRAV23DV6A0A075B6W5 121 aa18.2■□□□□ 0.5
CHKB-208ENST00000479003 IGKV3D-7A0A0C4DH55 119 aa18.2■□□□□ 0.5
CHKB-208ENST00000479003 DIRC1Q969H9 104 aa18.18■□□□□ 0.5
CHKB-208ENST00000479003 LINC01556Q5JQF7 62 aa18.17■□□□□ 0.5
CHKB-208ENST00000479003 Q6ZRU5 148 aa18.17■□□□□ 0.5
CHKB-208ENST00000479003 CSMD3Q7Z407 3707 aa18.17■□□□□ 0.5
CHKB-208ENST00000479003 SERP2Q8N6R1 65 aa18.17■□□□□ 0.5
CHKB-208ENST00000479003 VPREB1P12018 145 aa18.16■□□□□ 0.5
CHKB-208ENST00000479003 FAM19A5Q7Z5A7 132 aaPredicted RBP18.16■□□□□ 0.5
CHKB-208ENST00000479003 C1orf43Q9BWL3 253 aa18.15■□□□□ 0.5
CHKB-208ENST00000479003 H3BQ85 93 aa18.14■□□□□ 0.49
CHKB-208ENST00000479003 ZNF73O43830 326 aaPredicted RBP18.13■□□□□ 0.49
CHKB-208ENST00000479003 RBM3P98179 157 aaKnown RBP18.13■□□□□ 0.49
CHKB-208ENST00000479003 LOC107984640A0A0U1RRK4 108 aa18.13■□□□□ 0.49
CHKB-208ENST00000479003 Q6ZQY7 126 aa18.13■□□□□ 0.49
CHKB-208ENST00000479003 LYSTQ99698 3801 aa18.13■□□□□ 0.49
CHKB-208ENST00000479003 NDUFC2-KCTD14E9PQ53 114 aa18.12■□□□□ 0.49
CHKB-208ENST00000479003 TRBV7-6A0A0J9YX20 115 aa18.11■□□□□ 0.49
CHKB-208ENST00000479003 LINC00588Q9Y4M8 146 aa18.11■□□□□ 0.49
CHKB-208ENST00000479003 FBN3Q75N90 2809 aa18.1■□□□□ 0.49
CHKB-208ENST00000479003 LOC110117498A0A087WWA1 95 aa18.1■□□□□ 0.49
CHKB-208ENST00000479003 F8WDY8 70 aa18.1■□□□□ 0.49
CHKB-208ENST00000479003 M0R378 163 aa18.1■□□□□ 0.49
CHKB-208ENST00000479003 Q6ZQT0 140 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 350.3 ms