RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SMCR5Q8TEV8 140 aa3.85□□□□□ -1.79
USF3-202ENST00000478658 PLAC4Q8WY50 150 aa3.85□□□□□ -1.79
USF3-202ENST00000478658 CEMP1Q6PRD7 247 aaPredicted RBP3.84□□□□□ -1.79
USF3-202ENST00000478658 MRPL34Q9BQ48 92 aaKnown RBP3.84□□□□□ -1.79
USF3-202ENST00000478658 COL4A6Q14031 1691 aa3.84□□□□□ -1.79
USF3-202ENST00000478658 Q8NA96 180 aa3.84□□□□□ -1.8
USF3-202ENST00000478658 PKD1L2Q7Z442 2459 aa3.83□□□□□ -1.8
USF3-202ENST00000478658 COX6A2Q02221 97 aa3.83□□□□□ -1.8
USF3-202ENST00000478658 LINC00242Q5T6M2 205 aa3.83□□□□□ -1.8
USF3-202ENST00000478658 SPANXA2-OT1Q8N9U9 137 aa3.83□□□□□ -1.8
USF3-202ENST00000478658 Q6ZSV7 163 aa3.83□□□□□ -1.8
USF3-202ENST00000478658 SPATA3Q8NHX4 192 aa3.83□□□□□ -1.8
USF3-202ENST00000478658 CACNA1AO00555 2505 aa3.82□□□□□ -1.8
USF3-202ENST00000478658 WWC2-AS2Q96NR7 200 aa3.82□□□□□ -1.8
USF3-202ENST00000478658 LINC00167Q96N53 147 aa3.82□□□□□ -1.8
USF3-202ENST00000478658 SMIM29Q86T20 159 aa3.82□□□□□ -1.8
USF3-202ENST00000478658 C22orf24Q9Y442 160 aa3.82□□□□□ -1.8
USF3-202ENST00000478658 K7EQZ3 153 aa3.81□□□□□ -1.8
USF3-202ENST00000478658 ZFYVE26Q68DK2 2539 aa3.81□□□□□ -1.8
USF3-202ENST00000478658 IGLV1-51P01701 117 aa3.81□□□□□ -1.8
USF3-202ENST00000478658 Q6ZRX8 168 aa3.81□□□□□ -1.8
USF3-202ENST00000478658 POLR2KP53803 58 aaKnown RBP3.81□□□□□ -1.8
USF3-202ENST00000478658 COA5Q86WW8 74 aa3.81□□□□□ -1.8
USF3-202ENST00000478658 UNQ6190/PRO20217Q6UXQ8 127 aa3.8□□□□□ -1.8
USF3-202ENST00000478658 RTL8CO15255 209 aa3.8□□□□□ -1.8
USF3-202ENST00000478658 PRR9Q5T870 116 aa3.8□□□□□ -1.8
USF3-202ENST00000478658 LINC00205P59089 165 aa3.8□□□□□ -1.8
USF3-202ENST00000478658 ZNF295-AS1Q8N0V1 137 aa3.8□□□□□ -1.8
USF3-202ENST00000478658 LINC01006Q8NI28 216 aa3.8□□□□□ -1.8
USF3-202ENST00000478658 IGLV1-40P01703 118 aa3.79□□□□□ -1.8
USF3-202ENST00000478658 FAM104AQ969W3 186 aa3.79□□□□□ -1.8
USF3-202ENST00000478658 TP53TG3Q9ULZ0 132 aa3.79□□□□□ -1.8
USF3-202ENST00000478658 LMO4P61968 165 aa3.79□□□□□ -1.8
USF3-202ENST00000478658 DEFB116Q30KQ4 102 aa3.79□□□□□ -1.8
USF3-202ENST00000478658 A0A087WYN8 130 aa3.78□□□□□ -1.8
USF3-202ENST00000478658 M0R2T5 61 aa3.77□□□□□ -1.81
USF3-202ENST00000478658 CDSNQ15517 529 aa3.77□□□□□ -1.81
USF3-202ENST00000478658 IGLV8-61A0A075B6I0 122 aa3.77□□□□□ -1.81
USF3-202ENST00000478658 IGLV5-39A0A0G2JS06 123 aa3.77□□□□□ -1.81
USF3-202ENST00000478658 IGLV6-57P01721 117 aa3.77□□□□□ -1.81
USF3-202ENST00000478658 Q6ZSN1 163 aa3.77□□□□□ -1.81
USF3-202ENST00000478658 GVQW2A0A096LPI5 108 aaPredicted RBP3.77□□□□□ -1.81
USF3-202ENST00000478658 IGIPA6NJ69 53 aa3.77□□□□□ -1.81
USF3-202ENST00000478658 PROK1P58294 105 aa3.77□□□□□ -1.81
USF3-202ENST00000478658 ST20-AS1Q8NBB2 130 aa3.77□□□□□ -1.81
USF3-202ENST00000478658 Q6ZSA8 131 aa3.76□□□□□ -1.81
USF3-202ENST00000478658 NBDYA0A0U1RRE5 68 aa3.76□□□□□ -1.81
USF3-202ENST00000478658 LINC00476Q8WZB0 136 aa3.76□□□□□ -1.81
USF3-202ENST00000478658 TM2D3Q9BRN9 247 aa3.76□□□□□ -1.81
USF3-202ENST00000478658 A0A1B0GVX0 72 aa3.76□□□□□ -1.81
USF3-202ENST00000478658 IGLV1-50A0A075B6I6 118 aa3.76□□□□□ -1.81
USF3-202ENST00000478658 PROK2Q9HC23 129 aa3.74□□□□□ -1.81
USF3-202ENST00000478658 PLA2G2DQ9UNK4 145 aa3.74□□□□□ -1.81
USF3-202ENST00000478658 COL4A3Q01955 1670 aa3.74□□□□□ -1.81
USF3-202ENST00000478658 C10orf142B7Z368 130 aa3.73□□□□□ -1.81
USF3-202ENST00000478658 Q9UF83 564 aa3.73□□□□□ -1.81
USF3-202ENST00000478658 GDF5OSQ5U4N7 250 aa3.73□□□□□ -1.81
USF3-202ENST00000478658 IGLV5-48A0A075B6I7 105 aa3.72□□□□□ -1.81
USF3-202ENST00000478658 ASB16-AS1Q495Z4 193 aa3.72□□□□□ -1.81
USF3-202ENST00000478658 CSAG1Q6PB30 78 aa3.72□□□□□ -1.81
USF3-202ENST00000478658 Q6ZRU5 148 aa3.72□□□□□ -1.81
USF3-202ENST00000478658 IGLV5-45A0A087WSX0 123 aa3.72□□□□□ -1.81
USF3-202ENST00000478658 SEC61BP60468 96 aaKnown RBP3.72□□□□□ -1.81
USF3-202ENST00000478658 COX8CQ7Z4L0 72 aa3.72□□□□□ -1.81
USF3-202ENST00000478658 USP9XQ93008 2570 aaPredicted RBP3.72□□□□□ -1.81
USF3-202ENST00000478658 TLX1NBP0CAT3 122 aa3.72□□□□□ -1.81
USF3-202ENST00000478658 ZNF861PO60384 105 aa3.72□□□□□ -1.81
USF3-202ENST00000478658 DNAH10OSP0CZ25 163 aa3.71□□□□□ -1.81
USF3-202ENST00000478658 LINC00528Q8N1L1 170 aa3.71□□□□□ -1.81
USF3-202ENST00000478658 MAPKAPK5-AS1Q8N8E1 139 aa3.71□□□□□ -1.82
USF3-202ENST00000478658 MUC22E2RYF6 1773 aaPredicted RBP3.71□□□□□ -1.82
USF3-202ENST00000478658 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.7□□□□□ -1.82
USF3-202ENST00000478658 ANKRD17O75179 2603 aaKnown RBP3.7□□□□□ -1.82
USF3-202ENST00000478658 U3KQA8 63 aa3.7□□□□□ -1.82
USF3-202ENST00000478658 EPG5Q9HCE0 2579 aa3.7□□□□□ -1.82
USF3-202ENST00000478658 GRNP28799 593 aaKnown RBP3.7□□□□□ -1.82
USF3-202ENST00000478658 C15orf56Q8N910 161 aa3.7□□□□□ -1.82
USF3-202ENST00000478658 TTTY13Q9BZ97 58 aa3.7□□□□□ -1.82
USF3-202ENST00000478658 H1FX-AS1Q4G0G2 97 aa3.69□□□□□ -1.82
USF3-202ENST00000478658 PRR34Q9NV39 138 aa3.69□□□□□ -1.82
USF3-202ENST00000478658 KLKP1Q107X0 134 aa3.69□□□□□ -1.82
USF3-202ENST00000478658 H3BS24 57 aa3.69□□□□□ -1.82
USF3-202ENST00000478658 A0A1B0GU33 70 aa3.69□□□□□ -1.82
USF3-202ENST00000478658 OBSCN-AS1Q96MR7 158 aa3.68□□□□□ -1.82
USF3-202ENST00000478658 S4R3F8 94 aa3.68□□□□□ -1.82
USF3-202ENST00000478658 LINC01546A6NGU7 62 aa3.68□□□□□ -1.82
USF3-202ENST00000478658 FAM229BQ4G0N7 80 aa3.67□□□□□ -1.82
USF3-202ENST00000478658 TLN2Q9Y4G6 2542 aa3.67□□□□□ -1.82
USF3-202ENST00000478658 ZNF575Q86XF7 245 aa3.67□□□□□ -1.82
USF3-202ENST00000478658 SPINK7P58062 85 aa3.67□□□□□ -1.82
USF3-202ENST00000478658 COL4A5P29400 1685 aa3.66□□□□□ -1.82
USF3-202ENST00000478658 Q6ZS46 218 aa3.66□□□□□ -1.82
USF3-202ENST00000478658 Q8NAQ8 132 aa3.66□□□□□ -1.82
USF3-202ENST00000478658 ODF3L2Q3SX64 289 aa3.66□□□□□ -1.82
USF3-202ENST00000478658 TLN1Q9Y490 2541 aaKnown RBP3.66□□□□□ -1.82
USF3-202ENST00000478658 LINC00315P59091 139 aa3.66□□□□□ -1.82
USF3-202ENST00000478658 KCNQ1DNQ9H478 68 aa3.65□□□□□ -1.82
USF3-202ENST00000478658 CRIP1P50238 77 aa3.65□□□□□ -1.82
USF3-202ENST00000478658 A0A0D9SG42 100 aa3.65□□□□□ -1.83
USF3-202ENST00000478658 Q6ZPA2 131 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms