RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 RHEBQ15382 184 aa6.62□□□□□ -1.35
HDLBP-236ENST00000477477 COX19Q49B96 90 aa6.62□□□□□ -1.35
HDLBP-236ENST00000477477 ZNF22P17026 224 aaPredicted RBP6.61□□□□□ -1.35
HDLBP-236ENST00000477477 DDTP30046 118 aa6.61□□□□□ -1.35
HDLBP-236ENST00000477477 PRLHP81277 87 aa6.61□□□□□ -1.35
HDLBP-236ENST00000477477 FABP9Q0Z7S8 132 aa6.61□□□□□ -1.35
HDLBP-236ENST00000477477 LINC00304Q8N9R0 145 aa6.61□□□□□ -1.35
HDLBP-236ENST00000477477 A0A096LNJ9 63 aa6.6□□□□□ -1.35
HDLBP-236ENST00000477477 C14orf144Q96I85 54 aa6.6□□□□□ -1.35
HDLBP-236ENST00000477477 RETNLBQ9BQ08 111 aa6.6□□□□□ -1.35
HDLBP-236ENST00000477477 TMEM126AQ9H061 195 aa6.6□□□□□ -1.35
HDLBP-236ENST00000477477 SND1-IT1Q9HBX3 110 aa6.6□□□□□ -1.35
HDLBP-236ENST00000477477 ERG28Q9UKR5 140 aa6.6□□□□□ -1.35
HDLBP-236ENST00000477477 CHTOPQ9Y3Y2 248 aaKnown RBP6.6□□□□□ -1.35
HDLBP-236ENST00000477477 FAT4Q6V0I7 4981 aa6.59□□□□□ -1.35
HDLBP-236ENST00000477477 IGKV2D-26A0A0A0MRZ7 120 aa6.59□□□□□ -1.35
HDLBP-236ENST00000477477 TMEM238C9JI98 176 aa6.59□□□□□ -1.35
HDLBP-236ENST00000477477 NDUFA6P56556 154 aa6.59□□□□□ -1.35
HDLBP-236ENST00000477477 RPL24P83731 157 aaKnown RBP6.59□□□□□ -1.35
HDLBP-236ENST00000477477 COX17Q14061 63 aa6.59□□□□□ -1.35
HDLBP-236ENST00000477477 FAM19A1Q7Z5A9 133 aa6.59□□□□□ -1.35
HDLBP-236ENST00000477477 HSBP1L1C9JCN9 74 aa6.58□□□□□ -1.36
HDLBP-236ENST00000477477 M0R378 163 aa6.58□□□□□ -1.36
HDLBP-236ENST00000477477 Q8NDZ9 215 aa6.58□□□□□ -1.36
HDLBP-236ENST00000477477 URB1-AS1Q96HZ7 61 aa6.58□□□□□ -1.36
HDLBP-236ENST00000477477 A0A1B0GV90 55 aa6.57□□□□□ -1.36
HDLBP-236ENST00000477477 COLCA2A8K830 154 aa6.57□□□□□ -1.36
HDLBP-236ENST00000477477 HBDP02042 147 aa6.57□□□□□ -1.36
HDLBP-236ENST00000477477 TPRXLQ17RH7 258 aa6.57□□□□□ -1.36
HDLBP-236ENST00000477477 ZNF625Q96I27 306 aaPredicted RBP6.57□□□□□ -1.36
HDLBP-236ENST00000477477 C11orf86A6NJI1 115 aa6.56□□□□□ -1.36
HDLBP-236ENST00000477477 SFTA2Q6UW10 78 aa6.56□□□□□ -1.36
HDLBP-236ENST00000477477 CBLN2Q8IUK8 224 aa6.56□□□□□ -1.36
HDLBP-236ENST00000477477 C18orf32Q8TCD1 76 aa6.56□□□□□ -1.36
HDLBP-236ENST00000477477 PLEKHB2Q96CS7 222 aa6.56□□□□□ -1.36
HDLBP-236ENST00000477477 IGLV7-46A0A075B6I9 117 aa6.55□□□□□ -1.36
HDLBP-236ENST00000477477 PMCHL1Q16048 86 aa6.55□□□□□ -1.36
HDLBP-236ENST00000477477 LCE2AQ5TA79 106 aaPredicted RBP6.55□□□□□ -1.36
HDLBP-236ENST00000477477 RPS10P5Q9NQ39 176 aa6.55□□□□□ -1.36
HDLBP-236ENST00000477477 TMEM170BQ5T4T1 132 aa6.54□□□□□ -1.36
HDLBP-236ENST00000477477 BAGE3Q86Y29 109 aa6.54□□□□□ -1.36
HDLBP-236ENST00000477477 C3orf22Q8N5N4 141 aa6.54□□□□□ -1.36
HDLBP-236ENST00000477477 HIGD2AQ9BW72 106 aa6.54□□□□□ -1.36
HDLBP-236ENST00000477477 CDIP1Q9H305 208 aa6.54□□□□□ -1.36
HDLBP-236ENST00000477477 MUC17Q685J3 4493 aa6.54□□□□□ -1.36
HDLBP-236ENST00000477477 M0R143 59 aa6.53□□□□□ -1.36
HDLBP-236ENST00000477477 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
HDLBP-236ENST00000477477 TRAPPC1Q9Y5R8 145 aa6.53□□□□□ -1.36
HDLBP-236ENST00000477477 LINC00158P58513 81 aa6.52□□□□□ -1.37
HDLBP-236ENST00000477477 SPRR4Q96PI1 79 aa6.52□□□□□ -1.37
HDLBP-236ENST00000477477 DLEU1O43261 78 aa6.51□□□□□ -1.37
HDLBP-236ENST00000477477 SPAG11AQ6PDA7 123 aa6.51□□□□□ -1.37
HDLBP-236ENST00000477477 A0A0U1RRA0 63 aa6.5□□□□□ -1.37
HDLBP-236ENST00000477477 TMEM223A0PJW6 202 aa6.5□□□□□ -1.37
HDLBP-236ENST00000477477 PYY3Q5JQD4 70 aa6.5□□□□□ -1.37
HDLBP-236ENST00000477477 PET117Q6UWS5 81 aa6.5□□□□□ -1.37
HDLBP-236ENST00000477477 PPDPFQ9H3Y8 114 aa6.5□□□□□ -1.37
HDLBP-236ENST00000477477 JOSD1Q15040 202 aaPredicted RBP6.49□□□□□ -1.37
HDLBP-236ENST00000477477 ZNF706Q9Y5V0 76 aaPredicted RBP6.49□□□□□ -1.37
HDLBP-236ENST00000477477 TRAV12-1A0A0B4J245 112 aa6.48□□□□□ -1.37
HDLBP-236ENST00000477477 PRYO14603 147 aa6.48□□□□□ -1.37
HDLBP-236ENST00000477477 SMIM13P0DJ93 91 aa6.47□□□□□ -1.37
HDLBP-236ENST00000477477 SPRR1AP35321 89 aa6.47□□□□□ -1.37
HDLBP-236ENST00000477477 FP248Q71RG6 208 aaPredicted RBP6.47□□□□□ -1.37
HDLBP-236ENST00000477477 BOD1L2Q8IYS8 172 aa6.47□□□□□ -1.37
HDLBP-236ENST00000477477 LINC00337Q8N6G1 96 aa6.47□□□□□ -1.37
HDLBP-236ENST00000477477 NCR3O14931 201 aa6.46□□□□□ -1.38
HDLBP-236ENST00000477477 C21orf62-AS1Q17RA5 79 aa6.46□□□□□ -1.38
HDLBP-236ENST00000477477 C4orf48Q5BLP8 95 aa6.46□□□□□ -1.38
HDLBP-236ENST00000477477 MEIG1Q5JSS6 88 aa6.46□□□□□ -1.38
HDLBP-236ENST00000477477 MIR7-3HGQ8N6C7 128 aa6.46□□□□□ -1.38
HDLBP-236ENST00000477477 Q8NBF4 154 aa6.46□□□□□ -1.38
HDLBP-236ENST00000477477 IFI27L1Q96BM0 104 aa6.46□□□□□ -1.38
HDLBP-236ENST00000477477 KCNQ1DNQ9H478 68 aa6.46□□□□□ -1.38
HDLBP-236ENST00000477477 KRTAP4-16G5E9R7 235 aaPredicted RBP6.45□□□□□ -1.38
HDLBP-236ENST00000477477 HERV-K104P63124 156 aa6.45□□□□□ -1.38
HDLBP-236ENST00000477477 HIST3H2BBQ8N257 126 aa6.45□□□□□ -1.38
HDLBP-236ENST00000477477 DAND5Q8N907 189 aa6.45□□□□□ -1.38
HDLBP-236ENST00000477477 SMCR5Q8TEV8 140 aa6.45□□□□□ -1.38
HDLBP-236ENST00000477477 CHCHD1Q96BP2 118 aaKnown RBP6.45□□□□□ -1.38
HDLBP-236ENST00000477477 ETDCA0A1B0GVM5 59 aa6.44□□□□□ -1.38
HDLBP-236ENST00000477477 TRBV10-3A0A0K0K1G6 114 aa6.43□□□□□ -1.38
HDLBP-236ENST00000477477 KRTAP13-3Q3SY46 172 aa6.43□□□□□ -1.38
HDLBP-236ENST00000477477 LINC00483Q53H64 154 aa6.43□□□□□ -1.38
HDLBP-236ENST00000477477 COA6Q5JTJ3 125 aaKnown RBP6.43□□□□□ -1.38
HDLBP-236ENST00000477477 COL5A1-AS1Q5SY13 56 aa6.43□□□□□ -1.38
HDLBP-236ENST00000477477 NDUFA12Q9UI09 145 aa6.43□□□□□ -1.38
HDLBP-236ENST00000477477 A6NJY4 79 aa6.42□□□□□ -1.38
HDLBP-236ENST00000477477 SPINK1P00995 79 aa6.42□□□□□ -1.38
HDLBP-236ENST00000477477 YPEL4Q96NS1 127 aa6.42□□□□□ -1.38
HDLBP-236ENST00000477477 MYMXA0A1B0GTQ4 84 aa6.41□□□□□ -1.38
HDLBP-236ENST00000477477 C20orf202A1L168 122 aa6.41□□□□□ -1.38
HDLBP-236ENST00000477477 MAP1LC3CQ9BXW4 147 aa6.41□□□□□ -1.38
HDLBP-236ENST00000477477 B5MCH6 92 aa6.4□□□□□ -1.38
HDLBP-236ENST00000477477 HIST1H2BKO60814 126 aa6.4□□□□□ -1.38
HDLBP-236ENST00000477477 HIST1H2BJP06899 126 aa6.4□□□□□ -1.38
HDLBP-236ENST00000477477 FABP4P15090 132 aa6.4□□□□□ -1.38
HDLBP-236ENST00000477477 HIST1H2BOP23527 126 aa6.4□□□□□ -1.38
HDLBP-236ENST00000477477 HIST1H2BBP33778 126 aa6.4□□□□□ -1.38
HDLBP-236ENST00000477477 HIST1H2BDP58876 126 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms