RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 ADAMTSL4-AS1Q5T5F5 129 aa9.9□□□□□ -0.82
COPS3-207ENST00000477299 PCP2Q8IVA1 136 aa9.9□□□□□ -0.82
COPS3-207ENST00000477299 MIR7-3HGQ8N6C7 128 aa9.9□□□□□ -0.82
COPS3-207ENST00000477299 SFTA2Q6UW10 78 aa9.89□□□□□ -0.83
COPS3-207ENST00000477299 ZNF815PA8K554 130 aa9.87□□□□□ -0.83
COPS3-207ENST00000477299 FAM229AH3BQW9 127 aa9.87□□□□□ -0.83
COPS3-207ENST00000477299 M0QXV9 152 aa9.87□□□□□ -0.83
COPS3-207ENST00000477299 EIF4EBP3O60516 100 aaPredicted RBP9.87□□□□□ -0.83
COPS3-207ENST00000477299 TP73-AS1Q9UF72 201 aa9.87□□□□□ -0.83
COPS3-207ENST00000477299 C22orf24Q9Y442 160 aa9.87□□□□□ -0.83
COPS3-207ENST00000477299 JOSD1Q15040 202 aaPredicted RBP9.86□□□□□ -0.83
COPS3-207ENST00000477299 LITAFQ99732 161 aa9.86□□□□□ -0.83
COPS3-207ENST00000477299 HNRNPA3P51991 378 aaKnown RBP9.85□□□□□ -0.83
COPS3-207ENST00000477299 NPC2P61916 151 aa9.85□□□□□ -0.83
COPS3-207ENST00000477299 PRR3P79522 188 aaKnown RBP9.85□□□□□ -0.83
COPS3-207ENST00000477299 GAGE10A6NGK3 116 aa9.84□□□□□ -0.83
COPS3-207ENST00000477299 VPREB1P12018 145 aa9.84□□□□□ -0.83
COPS3-207ENST00000477299 AKR1D1P51857 326 aa9.84□□□□□ -0.83
COPS3-207ENST00000477299 RPL37AP61513 92 aaKnown RBP9.84□□□□□ -0.83
COPS3-207ENST00000477299 SOSTDC1Q6X4U4 206 aa9.84□□□□□ -0.83
COPS3-207ENST00000477299 PLA2G2DQ9UNK4 145 aa9.84□□□□□ -0.83
COPS3-207ENST00000477299 SRRM2Q9UQ35 2752 aaKnown RBP9.84□□□□□ -0.83
COPS3-207ENST00000477299 PYY3Q5JQD4 70 aa9.83□□□□□ -0.84
COPS3-207ENST00000477299 C7orf33Q8WU49 177 aa9.83□□□□□ -0.84
COPS3-207ENST00000477299 LINC00167Q96N53 147 aa9.82□□□□□ -0.84
COPS3-207ENST00000477299 PSORS1C2Q9UIG4 136 aa9.82□□□□□ -0.84
COPS3-207ENST00000477299 PKHD1L1Q86WI1 4243 aa9.81□□□□□ -0.84
COPS3-207ENST00000477299 IGLV5-37A0A075B6J1 123 aa9.81□□□□□ -0.84
COPS3-207ENST00000477299 RPL37AP8A6NKH3 93 aa9.81□□□□□ -0.84
COPS3-207ENST00000477299 LINC00587B1AMM8 73 aa9.81□□□□□ -0.84
COPS3-207ENST00000477299 BOD1L2Q8IYS8 172 aa9.81□□□□□ -0.84
COPS3-207ENST00000477299 HSBP1L1C9JCN9 74 aa9.8□□□□□ -0.84
COPS3-207ENST00000477299 PLA2G1BP04054 148 aaKnown RBP9.8□□□□□ -0.84
COPS3-207ENST00000477299 MRPL55Q7Z7F7 128 aaKnown RBP9.8□□□□□ -0.84
COPS3-207ENST00000477299 PAM16Q9Y3D7 125 aa9.8□□□□□ -0.84
COPS3-207ENST00000477299 UBE2BP63146 152 aa9.79□□□□□ -0.84
COPS3-207ENST00000477299 LOC107984156A0A0G2JMH3 177 aa9.78□□□□□ -0.84
COPS3-207ENST00000477299 SCGB1D4Q6XE38 83 aa9.78□□□□□ -0.84
COPS3-207ENST00000477299 ARL17AQ8IVW1 177 aa9.78□□□□□ -0.84
COPS3-207ENST00000477299 NKAPP1Q8N9T2 125 aa9.78□□□□□ -0.84
COPS3-207ENST00000477299 NCR3O14931 201 aa9.77□□□□□ -0.85
COPS3-207ENST00000477299 TIMM17BO60830 172 aa9.77□□□□□ -0.85
COPS3-207ENST00000477299 SPATA45Q537H7 98 aa9.77□□□□□ -0.85
COPS3-207ENST00000477299 LINC00308Q8TCZ7 52 aa9.77□□□□□ -0.85
COPS3-207ENST00000477299 C14orf144Q96I85 54 aa9.77□□□□□ -0.85
COPS3-207ENST00000477299 FLG2Q5D862 2391 aaPredicted RBP9.77□□□□□ -0.85
COPS3-207ENST00000477299 RPL24P83731 157 aaKnown RBP9.76□□□□□ -0.85
COPS3-207ENST00000477299 LBHQ53QV2 105 aaPredicted RBP9.76□□□□□ -0.85
COPS3-207ENST00000477299 C1orf137Q5JT78 98 aa9.76□□□□□ -0.85
COPS3-207ENST00000477299 IGKV2-28A0A075B6P5 120 aa9.75□□□□□ -0.85
COPS3-207ENST00000477299 IGKV2D-28P01615 120 aa9.75□□□□□ -0.85
COPS3-207ENST00000477299 INAFM2P0DMQ5 153 aa9.75□□□□□ -0.85
COPS3-207ENST00000477299 VAMP8Q9BV40 100 aa9.75□□□□□ -0.85
COPS3-207ENST00000477299 COX8AP10176 69 aa9.74□□□□□ -0.85
COPS3-207ENST00000477299 IGLV1-50A0A075B6I6 118 aa9.73□□□□□ -0.85
COPS3-207ENST00000477299 TMEM238C9JI98 176 aa9.72□□□□□ -0.85
COPS3-207ENST00000477299 M0R378 163 aa9.72□□□□□ -0.85
COPS3-207ENST00000477299 SPANXDQ9BXN6 97 aa9.72□□□□□ -0.85
COPS3-207ENST00000477299 SPANXCQ9NY87 97 aa9.72□□□□□ -0.85
COPS3-207ENST00000477299 SRSF9Q13242 221 aaKnown RBP eCLIP9.71□□□□□ -0.86
COPS3-207ENST00000477299 MUSTN1Q8IVN3 82 aa9.71□□□□□ -0.86
COPS3-207ENST00000477299 MIEN1Q9BRT3 115 aa9.71□□□□□ -0.86
COPS3-207ENST00000477299 TRBV10-3A0A0K0K1G6 114 aa9.7□□□□□ -0.86
COPS3-207ENST00000477299 LOC105371267A0A1B0GV96 52 aa9.7□□□□□ -0.86
COPS3-207ENST00000477299 IGLV7-43P04211 117 aa9.7□□□□□ -0.86
COPS3-207ENST00000477299 DLEU1O43261 78 aa9.68□□□□□ -0.86
COPS3-207ENST00000477299 NDUFC2O95298 119 aa9.68□□□□□ -0.86
COPS3-207ENST00000477299 C2orf91Q6ZV80 131 aa9.67□□□□□ -0.86
COPS3-207ENST00000477299 LRP1Q07954 4544 aaKnown RBP9.66□□□□□ -0.86
COPS3-207ENST00000477299 TMEM126AQ9H061 195 aa9.66□□□□□ -0.86
COPS3-207ENST00000477299 SPANXB1Q9NS25 103 aaPredicted RBP9.66□□□□□ -0.86
COPS3-207ENST00000477299 TRBV10-2A0A0K0K1G8 114 aa9.65□□□□□ -0.86
COPS3-207ENST00000477299 BCE1O60756 84 aa9.65□□□□□ -0.86
COPS3-207ENST00000477299 SLC25A34Q6PIV7 304 aa9.65□□□□□ -0.86
COPS3-207ENST00000477299 REG3GQ6UW15 175 aa9.65□□□□□ -0.86
COPS3-207ENST00000477299 LINC00337Q8N6G1 96 aa9.65□□□□□ -0.86
COPS3-207ENST00000477299 IFITM1P13164 125 aa9.64□□□□□ -0.87
COPS3-207ENST00000477299 DDTP30046 118 aa9.64□□□□□ -0.87
COPS3-207ENST00000477299 FAT3Q8TDW7 4589 aa9.64□□□□□ -0.87
COPS3-207ENST00000477299 IGLV6-57P01721 117 aa9.63□□□□□ -0.87
COPS3-207ENST00000477299 PRLHP81277 87 aa9.63□□□□□ -0.87
COPS3-207ENST00000477299 Q6ZVH6 145 aa9.63□□□□□ -0.87
COPS3-207ENST00000477299 MYCBP2O75592 4640 aa9.63□□□□□ -0.87
COPS3-207ENST00000477299 SPINK6Q6UWN8 80 aa9.62□□□□□ -0.87
COPS3-207ENST00000477299 KRTAP13-1Q8IUC0 172 aa9.62□□□□□ -0.87
COPS3-207ENST00000477299 KCNQ1DNQ9H478 68 aa9.62□□□□□ -0.87
COPS3-207ENST00000477299 ZNF861PO60384 105 aa9.61□□□□□ -0.87
COPS3-207ENST00000477299 S100A7L2Q5SY68 101 aa9.61□□□□□ -0.87
COPS3-207ENST00000477299 FAM19A1Q7Z5A9 133 aa9.61□□□□□ -0.87
COPS3-207ENST00000477299 OR13C6PQ8NH95 151 aa9.61□□□□□ -0.87
COPS3-207ENST00000477299 HIST1H4GQ99525 98 aa9.61□□□□□ -0.87
COPS3-207ENST00000477299 A4D1N5 150 aa9.6□□□□□ -0.87
COPS3-207ENST00000477299 KRTAP4-16G5E9R7 235 aaPredicted RBP9.6□□□□□ -0.87
COPS3-207ENST00000477299 PRYO14603 147 aa9.6□□□□□ -0.87
COPS3-207ENST00000477299 PRO1933Q9H354 126 aa9.6□□□□□ -0.87
COPS3-207ENST00000477299 HIGD1BQ9P298 99 aa9.6□□□□□ -0.87
COPS3-207ENST00000477299 SPRR1AP35321 89 aa9.59□□□□□ -0.87
COPS3-207ENST00000477299 PPDPFQ9H3Y8 114 aa9.59□□□□□ -0.87
COPS3-207ENST00000477299 HERC1Q15751 4861 aa9.58□□□□□ -0.88
COPS3-207ENST00000477299 UBE2AP49459 152 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms