RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 SPAG11BQ08648 103 aa11.22□□□□□ -0.61
TVP23B-202ENST00000476139 KLK5Q9Y337 293 aaPredicted RBP11.22□□□□□ -0.61
TVP23B-202ENST00000476139 H0YGX0 51 aa11.21□□□□□ -0.61
TVP23B-202ENST00000476139 COX17Q14061 63 aa11.21□□□□□ -0.62
TVP23B-202ENST00000476139 ACYP1P07311 99 aa11.2□□□□□ -0.62
TVP23B-202ENST00000476139 ESRGQ1W209 222 aa11.2□□□□□ -0.62
TVP23B-202ENST00000476139 FAM236AA0A1B0GUQ0 79 aa11.19□□□□□ -0.62
TVP23B-202ENST00000476139 FAM236BA0A1B0GV22 79 aa11.19□□□□□ -0.62
TVP23B-202ENST00000476139 INAFM2P0DMQ5 153 aa11.19□□□□□ -0.62
TVP23B-202ENST00000476139 DNAH3Q8TD57 4116 aa11.18□□□□□ -0.62
TVP23B-202ENST00000476139 BAHCC1Q9P281 2608 aa11.18□□□□□ -0.62
TVP23B-202ENST00000476139 TRBV7-7A0A0K0K1E9 115 aa11.17□□□□□ -0.62
TVP23B-202ENST00000476139 H3BNG1 76 aa11.17□□□□□ -0.62
TVP23B-202ENST00000476139 LINC00643Q86TS7 51 aa11.16□□□□□ -0.62
TVP23B-202ENST00000476139 DEFB131BA0A096LNP1 70 aa11.16□□□□□ -0.62
TVP23B-202ENST00000476139 C11orf45Q8TAV5 145 aa11.16□□□□□ -0.62
TVP23B-202ENST00000476139 HIGD2BQ4VC39 106 aa11.14□□□□□ -0.63
TVP23B-202ENST00000476139 NDUFC2O95298 119 aa11.14□□□□□ -0.63
TVP23B-202ENST00000476139 SDIM1Q6ZPB5 146 aa11.14□□□□□ -0.63
TVP23B-202ENST00000476139 IGKV3D-7A0A0C4DH55 119 aa11.13□□□□□ -0.63
TVP23B-202ENST00000476139 ORMDL1Q9P0S3 153 aa11.13□□□□□ -0.63
TVP23B-202ENST00000476139 C6orf99Q4VX62 202 aa11.13□□□□□ -0.63
TVP23B-202ENST00000476139 LINC00846Q9NV44 126 aa11.13□□□□□ -0.63
TVP23B-202ENST00000476139 C6orf48Q9UBA6 75 aa11.13□□□□□ -0.63
TVP23B-202ENST00000476139 S100A7L2Q5SY68 101 aa11.12□□□□□ -0.63
TVP23B-202ENST00000476139 KRTAP26-1Q6PEX3 210 aa11.12□□□□□ -0.63
TVP23B-202ENST00000476139 MRAPQ8TCY5 172 aa11.12□□□□□ -0.63
TVP23B-202ENST00000476139 TMEM126AQ9H061 195 aa11.12□□□□□ -0.63
TVP23B-202ENST00000476139 XAGE1AQ9HD64 81 aa11.11□□□□□ -0.63
TVP23B-202ENST00000476139 Q8N814 137 aa11.11□□□□□ -0.63
TVP23B-202ENST00000476139 MGAM2Q2M2H8 2515 aa11.1□□□□□ -0.63
TVP23B-202ENST00000476139 RPL18AQ02543 176 aaKnown RBP11.09□□□□□ -0.63
TVP23B-202ENST00000476139 ZNF561-AS1K7EIQ3 104 aa11.08□□□□□ -0.64
TVP23B-202ENST00000476139 OBSCN-AS1Q96MR7 158 aa11.07□□□□□ -0.64
TVP23B-202ENST00000476139 CAMK2N2Q96S95 79 aa11.06□□□□□ -0.64
TVP23B-202ENST00000476139 IMUPQ9GZP8 106 aa11.06□□□□□ -0.64
TVP23B-202ENST00000476139 A0A087WVE0 104 aa11.06□□□□□ -0.64
TVP23B-202ENST00000476139 GVQW2A0A096LPI5 108 aaPredicted RBP11.06□□□□□ -0.64
TVP23B-202ENST00000476139 C15orf56Q8N910 161 aa11.06□□□□□ -0.64
TVP23B-202ENST00000476139 IGKV2D-24A0A075B6R9 120 aa11.05□□□□□ -0.64
TVP23B-202ENST00000476139 HUWE1Q7Z6Z7 4374 aaKnown RBP11.05□□□□□ -0.64
TVP23B-202ENST00000476139 Q6ZRU5 148 aa11.04□□□□□ -0.64
TVP23B-202ENST00000476139 LINC01556Q5JQF7 62 aa11.04□□□□□ -0.64
TVP23B-202ENST00000476139 C1orf43Q9BWL3 253 aa11.04□□□□□ -0.64
TVP23B-202ENST00000476139 K7EIL1 84 aa11.03□□□□□ -0.64
TVP23B-202ENST00000476139 IGLV6-57P01721 117 aa11.01□□□□□ -0.65
TVP23B-202ENST00000476139 MUC7Q8TAX7 377 aa11.01□□□□□ -0.65
TVP23B-202ENST00000476139 TMEM256-PLSCR3K7ERE1 68 aa11.01□□□□□ -0.65
TVP23B-202ENST00000476139 COL7A1Q02388 2944 aa11□□□□□ -0.65
TVP23B-202ENST00000476139 TRBV10-3A0A0K0K1G6 114 aa11□□□□□ -0.65
TVP23B-202ENST00000476139 LINC00167Q96N53 147 aa11□□□□□ -0.65
TVP23B-202ENST00000476139 CCKP06307 115 aa11□□□□□ -0.65
TVP23B-202ENST00000476139 LINC00575Q6W349 94 aa11□□□□□ -0.65
TVP23B-202ENST00000476139 TM2D3Q9BRN9 247 aa11□□□□□ -0.65
TVP23B-202ENST00000476139 LYSTQ99698 3801 aa11□□□□□ -0.65
TVP23B-202ENST00000476139 LINC00588Q9Y4M8 146 aa10.99□□□□□ -0.65
TVP23B-202ENST00000476139 hADV29S1A0JD25 119 aa10.98□□□□□ -0.65
TVP23B-202ENST00000476139 HIST1H4AP62805 103 aaKnown RBP10.98□□□□□ -0.65
TVP23B-202ENST00000476139 LAMTOR3Q9UHA4 124 aa10.98□□□□□ -0.65
TVP23B-202ENST00000476139 TRAV10A0A0B4J240 114 aa10.97□□□□□ -0.65
TVP23B-202ENST00000476139 DNAH10OSP0CZ25 163 aa10.97□□□□□ -0.65
TVP23B-202ENST00000476139 A0A1B0GX51 115 aa10.96□□□□□ -0.65
TVP23B-202ENST00000476139 JMJD7-PLA2G4BH0Y9G9 81 aa10.96□□□□□ -0.65
TVP23B-202ENST00000476139 Q6ZQY7 126 aa10.96□□□□□ -0.65
TVP23B-202ENST00000476139 Q6ZRP5 223 aa10.96□□□□□ -0.65
TVP23B-202ENST00000476139 C9orf153Q5TBE3 101 aa10.96□□□□□ -0.66
TVP23B-202ENST00000476139 M0R2N4 97 aa10.95□□□□□ -0.66
TVP23B-202ENST00000476139 NDUFC2-KCTD14E9PQ53 114 aa10.95□□□□□ -0.66
TVP23B-202ENST00000476139 VPREB1P12018 145 aa10.95□□□□□ -0.66
TVP23B-202ENST00000476139 CASC10Q5T4H9 136 aa10.95□□□□□ -0.66
TVP23B-202ENST00000476139 Q6JHZ5 121 aa10.95□□□□□ -0.66
TVP23B-202ENST00000476139 C2orf48Q96LS8 159 aa10.94□□□□□ -0.66
TVP23B-202ENST00000476139 STAB2Q8WWQ8 2551 aa10.94□□□□□ -0.66
TVP23B-202ENST00000476139 TRAV23DV6A0A075B6W5 121 aa10.94□□□□□ -0.66
TVP23B-202ENST00000476139 C3orf22Q8N5N4 141 aa10.94□□□□□ -0.66
TVP23B-202ENST00000476139 SMIM20Q8N5G0 67 aa10.93□□□□□ -0.66
TVP23B-202ENST00000476139 SVIPQ8NHG7 77 aa10.92□□□□□ -0.66
TVP23B-202ENST00000476139 RBM3P98179 157 aaKnown RBP10.92□□□□□ -0.66
TVP23B-202ENST00000476139 SYCNQ0VAF6 134 aa10.92□□□□□ -0.66
TVP23B-202ENST00000476139 FAM19A1Q7Z5A9 133 aa10.91□□□□□ -0.66
TVP23B-202ENST00000476139 ZNF73O43830 326 aaPredicted RBP10.91□□□□□ -0.66
TVP23B-202ENST00000476139 DNAH1Q9P2D7 4330 aa10.9□□□□□ -0.66
TVP23B-202ENST00000476139 UQCRQO14949 82 aa10.89□□□□□ -0.67
TVP23B-202ENST00000476139 DIRC1Q969H9 104 aa10.89□□□□□ -0.67
TVP23B-202ENST00000476139 COX7CP15954 63 aa10.88□□□□□ -0.67
TVP23B-202ENST00000476139 USP17L23D6RBM5 183 aa10.87□□□□□ -0.67
TVP23B-202ENST00000476139 ATOX1O00244 68 aa10.87□□□□□ -0.67
TVP23B-202ENST00000476139 CYSTM1Q9H1C7 97 aa10.87□□□□□ -0.67
TVP23B-202ENST00000476139 M0R378 163 aa10.87□□□□□ -0.67
TVP23B-202ENST00000476139 TENM2Q9NT68 2774 aa10.87□□□□□ -0.67
TVP23B-202ENST00000476139 Q6ZQT0 140 aa10.86□□□□□ -0.67
TVP23B-202ENST00000476139 MDFIQ99750 246 aa10.86□□□□□ -0.67
TVP23B-202ENST00000476139 UBL5Q9BZL1 73 aa10.86□□□□□ -0.67
TVP23B-202ENST00000476139 COX7BP24311 80 aa10.85□□□□□ -0.67
TVP23B-202ENST00000476139 SERTAD4-AS1Q5TG53 156 aa10.85□□□□□ -0.67
TVP23B-202ENST00000476139 DNAH10Q8IVF4 4471 aa10.84□□□□□ -0.67
TVP23B-202ENST00000476139 ELOF1P60002 83 aaKnown RBP10.84□□□□□ -0.67
TVP23B-202ENST00000476139 DSCR8Q96T75 97 aa10.84□□□□□ -0.67
TVP23B-202ENST00000476139 HAMPP81172 84 aa10.83□□□□□ -0.68
TVP23B-202ENST00000476139 DNAH9Q9NYC9 4486 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms