RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 HSBP1L1C9JCN9 74 aa9.38□□□□□ -0.91
VARS-223ENST00000474643 HERV-K104P63124 156 aa9.37□□□□□ -0.91
VARS-223ENST00000474643 FAM168BA1KXE4 195 aa9.36□□□□□ -0.91
VARS-223ENST00000474643 LINC00587B1AMM8 73 aa9.36□□□□□ -0.91
VARS-223ENST00000474643 J3QQQ9 107 aa9.36□□□□□ -0.91
VARS-223ENST00000474643 C1orf137Q5JT78 98 aa9.36□□□□□ -0.91
VARS-223ENST00000474643 PHF5AQ7RTV0 110 aaKnown RBP9.36□□□□□ -0.91
VARS-223ENST00000474643 ZNF625Q96I27 306 aaPredicted RBP9.36□□□□□ -0.91
VARS-223ENST00000474643 COX17Q14061 63 aa9.35□□□□□ -0.91
VARS-223ENST00000474643 XAGE1AQ9HD64 81 aa9.35□□□□□ -0.91
VARS-223ENST00000474643 PSORS1C2Q9UIG4 136 aa9.35□□□□□ -0.91
VARS-223ENST00000474643 MYMXA0A1B0GTQ4 84 aa9.34□□□□□ -0.91
VARS-223ENST00000474643 LGALS3P17931 250 aaKnown RBP9.34□□□□□ -0.91
VARS-223ENST00000474643 PYY3Q5JQD4 70 aa9.34□□□□□ -0.91
VARS-223ENST00000474643 C9orf129Q5T035 196 aaKnown RBP9.34□□□□□ -0.91
VARS-223ENST00000474643 NDUFA12Q9UI09 145 aa9.34□□□□□ -0.91
VARS-223ENST00000474643 M0QXV9 152 aa9.33□□□□□ -0.92
VARS-223ENST00000474643 PFN2P35080 140 aa9.33□□□□□ -0.92
VARS-223ENST00000474643 UBE2BP63146 152 aa9.33□□□□□ -0.92
VARS-223ENST00000474643 ATOH7Q8N100 152 aa9.33□□□□□ -0.92
VARS-223ENST00000474643 TNXBP22105 4242 aa9.32□□□□□ -0.92
VARS-223ENST00000474643 TSPEAR-AS2P59090 65 aa9.3□□□□□ -0.92
VARS-223ENST00000474643 SRSF9Q13242 221 aaKnown RBP eCLIP9.3□□□□□ -0.92
VARS-223ENST00000474643 ANKRD39Q53RE8 183 aa9.3□□□□□ -0.92
VARS-223ENST00000474643 ERG28Q9UKR5 140 aa9.3□□□□□ -0.92
VARS-223ENST00000474643 UBR4Q5T4S7 5183 aa9.3□□□□□ -0.92
VARS-223ENST00000474643 IGKV2D-26A0A0A0MRZ7 120 aa9.29□□□□□ -0.92
VARS-223ENST00000474643 DIRC1Q969H9 104 aa9.29□□□□□ -0.92
VARS-223ENST00000474643 VAMP8Q9BV40 100 aa9.29□□□□□ -0.92
VARS-223ENST00000474643 SMIM6P0DI80 62 aa9.28□□□□□ -0.92
VARS-223ENST00000474643 LINC00158P58513 81 aa9.28□□□□□ -0.92
VARS-223ENST00000474643 LBHQ53QV2 105 aaPredicted RBP9.28□□□□□ -0.92
VARS-223ENST00000474643 DLEU1O43261 78 aa9.27□□□□□ -0.93
VARS-223ENST00000474643 TIMM17BO60830 172 aa9.27□□□□□ -0.93
VARS-223ENST00000474643 MEIG1Q5JSS6 88 aa9.27□□□□□ -0.93
VARS-223ENST00000474643 LINC00518Q8N0U6 118 aa9.27□□□□□ -0.93
VARS-223ENST00000474643 A0A0U1RRA0 63 aa9.26□□□□□ -0.93
VARS-223ENST00000474643 ZNF815PA8K554 130 aa9.26□□□□□ -0.93
VARS-223ENST00000474643 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
VARS-223ENST00000474643 S100A12P80511 92 aa9.26□□□□□ -0.93
VARS-223ENST00000474643 KRTAP7-1Q8IUC3 87 aa9.26□□□□□ -0.93
VARS-223ENST00000474643 NKAPP1Q8N9T2 125 aa9.26□□□□□ -0.93
VARS-223ENST00000474643 C22orf24Q9Y442 160 aa9.26□□□□□ -0.93
VARS-223ENST00000474643 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
VARS-223ENST00000474643 A0A0J9YXY3 114 aa9.24□□□□□ -0.93
VARS-223ENST00000474643 COX8AP10176 69 aa9.24□□□□□ -0.93
VARS-223ENST00000474643 SPATA45Q537H7 98 aa9.24□□□□□ -0.93
VARS-223ENST00000474643 MRPL55Q7Z7F7 128 aaKnown RBP9.24□□□□□ -0.93
VARS-223ENST00000474643 SND1-IT1Q9HBX3 110 aa9.24□□□□□ -0.93
VARS-223ENST00000474643 Q6ZVH6 145 aa9.23□□□□□ -0.93
VARS-223ENST00000474643 BOD1L2Q8IYS8 172 aa9.23□□□□□ -0.93
VARS-223ENST00000474643 PPDPFQ9H3Y8 114 aa9.23□□□□□ -0.93
VARS-223ENST00000474643 TP73-AS1Q9UF72 201 aa9.23□□□□□ -0.93
VARS-223ENST00000474643 LOC107984156A0A0G2JMH3 177 aa9.22□□□□□ -0.93
VARS-223ENST00000474643 GAGE10A6NGK3 116 aa9.22□□□□□ -0.93
VARS-223ENST00000474643 SMIM13P0DJ93 91 aa9.22□□□□□ -0.93
VARS-223ENST00000474643 PCP2Q8IVA1 136 aa9.22□□□□□ -0.93
VARS-223ENST00000474643 ARL17AQ8IVW1 177 aa9.22□□□□□ -0.93
VARS-223ENST00000474643 PAM16Q9Y3D7 125 aa9.22□□□□□ -0.93
VARS-223ENST00000474643 H0Y9J4 135 aa9.21□□□□□ -0.94
VARS-223ENST00000474643 RPL24P83731 157 aaKnown RBP9.21□□□□□ -0.94
VARS-223ENST00000474643 SCGB1D4Q6XE38 83 aa9.21□□□□□ -0.94
VARS-223ENST00000474643 KRTAP11-1Q8IUC1 163 aa9.21□□□□□ -0.94
VARS-223ENST00000474643 TMEM238C9JI98 176 aa9.2□□□□□ -0.94
VARS-223ENST00000474643 COPS9Q8WXC6 57 aa9.2□□□□□ -0.94
VARS-223ENST00000474643 RPL37AP8A6NKH3 93 aa9.19□□□□□ -0.94
VARS-223ENST00000474643 SLC25A34Q6PIV7 304 aa9.19□□□□□ -0.94
VARS-223ENST00000474643 PRR26Q8N8Z3 221 aa9.19□□□□□ -0.94
VARS-223ENST00000474643 LINC00167Q96N53 147 aa9.19□□□□□ -0.94
VARS-223ENST00000474643 C12orf57Q99622 126 aa9.19□□□□□ -0.94
VARS-223ENST00000474643 LITAFQ99732 161 aa9.19□□□□□ -0.94
VARS-223ENST00000474643 IGLV5-37A0A075B6J1 123 aa9.18□□□□□ -0.94
VARS-223ENST00000474643 MIR7-3HGQ8N6C7 128 aa9.18□□□□□ -0.94
VARS-223ENST00000474643 SPANXDQ9BXN6 97 aa9.18□□□□□ -0.94
VARS-223ENST00000474643 TTTY13Q9BZ97 58 aa9.18□□□□□ -0.94
VARS-223ENST00000474643 SPANXCQ9NY87 97 aa9.18□□□□□ -0.94
VARS-223ENST00000474643 HIGD1BQ9P298 99 aa9.18□□□□□ -0.94
VARS-223ENST00000474643 IFITM1P13164 125 aa9.17□□□□□ -0.94
VARS-223ENST00000474643 SPANXB1Q9NS25 103 aaPredicted RBP9.17□□□□□ -0.94
VARS-223ENST00000474643 VPREB1P12018 145 aa9.16□□□□□ -0.94
VARS-223ENST00000474643 LRP2P98164 4655 aa9.16□□□□□ -0.94
VARS-223ENST00000474643 IGLV1-50A0A075B6I6 118 aa9.15□□□□□ -0.94
VARS-223ENST00000474643 IGKV2-28A0A075B6P5 120 aa9.15□□□□□ -0.94
VARS-223ENST00000474643 IGKV2D-28P01615 120 aa9.15□□□□□ -0.94
VARS-223ENST00000474643 RPL13AP40429 203 aaKnown RBP9.15□□□□□ -0.94
VARS-223ENST00000474643 ADAMTSL4-AS1Q5T5F5 129 aa9.15□□□□□ -0.94
VARS-223ENST00000474643 C14orf144Q96I85 54 aa9.15□□□□□ -0.94
VARS-223ENST00000474643 MIEN1Q9BRT3 115 aa9.14□□□□□ -0.95
VARS-223ENST00000474643 NDUFC2O95298 119 aa9.13□□□□□ -0.95
VARS-223ENST00000474643 DAND5Q8N907 189 aa9.13□□□□□ -0.95
VARS-223ENST00000474643 UQCR10Q9UDW1 63 aa9.13□□□□□ -0.95
VARS-223ENST00000474643 BCE1O60756 84 aa9.12□□□□□ -0.95
VARS-223ENST00000474643 LINC00308Q8TCZ7 52 aa9.12□□□□□ -0.95
VARS-223ENST00000474643 NCR3O14931 201 aa9.11□□□□□ -0.95
VARS-223ENST00000474643 ZNF861PO60384 105 aa9.11□□□□□ -0.95
VARS-223ENST00000474643 RPL28P46779 137 aaKnown RBP9.11□□□□□ -0.95
VARS-223ENST00000474643 UBE2AP49459 152 aa9.11□□□□□ -0.95
VARS-223ENST00000474643 TAL2Q16559 108 aa9.11□□□□□ -0.95
VARS-223ENST00000474643 M0R378 163 aa9.1□□□□□ -0.95
VARS-223ENST00000474643 Q8NDZ9 215 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms