RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SNURFQ9Y675 71 aa4.02□□□□□ -1.77
SMARCE1-208ENST00000474246 A0A087WVE0 104 aa4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 CXorf51AA0A1B0GTR3 108 aa4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 A0A1W2PPR1 153 aa4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 C11orf86A6NJI1 115 aa4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 SAA2P0DJI9 122 aaPredicted RBP4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 EIF4EBP1Q13541 118 aaPredicted RBP4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 HEATR1Q9H583 2144 aaKnown RBP4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 TET2Q6N021 2002 aaPredicted RBP4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 A0A087WSZ3 146 aa4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 TRAV12-3A0A0B4J271 114 aa4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 H7C2G1 150 aa4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 IGKV3-11P04433 115 aa4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 LYPD6Q86Y78 171 aa4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 C22orf24Q9Y442 160 aa4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 ICOSQ9Y6W8 199 aa4.01□□□□□ -1.77
SMARCE1-208ENST00000474246 PRR14LQ5THK1 2151 aa4□□□□□ -1.77
SMARCE1-208ENST00000474246 DNAH10OSP0CZ25 163 aa4□□□□□ -1.77
SMARCE1-208ENST00000474246 FXYD6P3P58550 94 aa4□□□□□ -1.77
SMARCE1-208ENST00000474246 C15orf56Q8N910 161 aa4□□□□□ -1.77
SMARCE1-208ENST00000474246 TMEM254Q8TBM7 123 aa4□□□□□ -1.77
SMARCE1-208ENST00000474246 PLCE1Q9P212 2302 aa4□□□□□ -1.77
SMARCE1-208ENST00000474246 IGKV1D-42A0A075B6H8 117 aa4□□□□□ -1.77
SMARCE1-208ENST00000474246 C17orf98A8MV24 154 aa4□□□□□ -1.77
SMARCE1-208ENST00000474246 J3QRE1 110 aa4□□□□□ -1.77
SMARCE1-208ENST00000474246 K7EMI3 77 aa4□□□□□ -1.77
SMARCE1-208ENST00000474246 PROP1O75360 226 aa4□□□□□ -1.77
SMARCE1-208ENST00000474246 DNAL4O96015 105 aa4□□□□□ -1.77
SMARCE1-208ENST00000474246 TLX1NBP0CAT3 122 aa4□□□□□ -1.77
SMARCE1-208ENST00000474246 LINC01547P58512 204 aaPredicted RBP4□□□□□ -1.77
SMARCE1-208ENST00000474246 NTM-AS1Q6ZSK4 140 aa4□□□□□ -1.77
SMARCE1-208ENST00000474246 DOCK10Q96BY6 2186 aa3.99□□□□□ -1.77
SMARCE1-208ENST00000474246 IGKV3D-7A0A0C4DH55 119 aa3.99□□□□□ -1.77
SMARCE1-208ENST00000474246 FSHBP01225 129 aa3.99□□□□□ -1.77
SMARCE1-208ENST00000474246 NDUFA4L2Q9NRX3 87 aa3.99□□□□□ -1.77
SMARCE1-208ENST00000474246 FAM215AQ9Y5M1 114 aa3.99□□□□□ -1.77
SMARCE1-208ENST00000474246 H3BPC8 53 aa3.98□□□□□ -1.77
SMARCE1-208ENST00000474246 HMGN4O00479 90 aa3.98□□□□□ -1.77
SMARCE1-208ENST00000474246 IGLV2-14P01704 120 aa3.98□□□□□ -1.77
SMARCE1-208ENST00000474246 BAALC-AS2P0C853 105 aa3.98□□□□□ -1.77
SMARCE1-208ENST00000474246 PLNP26678 52 aa3.98□□□□□ -1.77
SMARCE1-208ENST00000474246 KIF25-AS1Q9Y6Z4 181 aa3.98□□□□□ -1.77
SMARCE1-208ENST00000474246 IGLV10-54A0A075B6I4 117 aa3.98□□□□□ -1.77
SMARCE1-208ENST00000474246 Q8N1X5 172 aa3.98□□□□□ -1.77
SMARCE1-208ENST00000474246 MIR7-3HGQ8N6C7 128 aa3.98□□□□□ -1.77
SMARCE1-208ENST00000474246 A0A096LNT2 108 aa3.97□□□□□ -1.77
SMARCE1-208ENST00000474246 INSP01308 110 aa3.97□□□□□ -1.77
SMARCE1-208ENST00000474246 C20orf166-AS1Q96NR2 134 aa3.97□□□□□ -1.77
SMARCE1-208ENST00000474246 WFDC6Q9BQY6 131 aa3.97□□□□□ -1.77
SMARCE1-208ENST00000474246 FAT4Q6V0I7 4981 aa3.97□□□□□ -1.77
SMARCE1-208ENST00000474246 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.97□□□□□ -1.77
SMARCE1-208ENST00000474246 RTL8CO15255 209 aa3.97□□□□□ -1.77
SMARCE1-208ENST00000474246 LYZP61626 148 aa3.97□□□□□ -1.77
SMARCE1-208ENST00000474246 TMEM263Q8WUH6 116 aaKnown RBP3.97□□□□□ -1.77
SMARCE1-208ENST00000474246 MPDZO75970 2070 aa3.96□□□□□ -1.77
SMARCE1-208ENST00000474246 IGKV1D-37A0A075B6S9 117 aa3.96□□□□□ -1.78
SMARCE1-208ENST00000474246 IGKV1OR2-108A0A075B7D4 117 aa3.96□□□□□ -1.78
SMARCE1-208ENST00000474246 PROK1P58294 105 aa3.96□□□□□ -1.78
SMARCE1-208ENST00000474246 SPANXN5Q5MJ07 72 aa3.96□□□□□ -1.78
SMARCE1-208ENST00000474246 HRNRQ86YZ3 2850 aaPredicted RBP3.95□□□□□ -1.78
SMARCE1-208ENST00000474246 A8MUU9 505 aa3.95□□□□□ -1.78
SMARCE1-208ENST00000474246 Q8N9P0 234 aaPredicted RBP3.95□□□□□ -1.78
SMARCE1-208ENST00000474246 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
SMARCE1-208ENST00000474246 IGHV3OR16-8A0A075B7F1 116 aa3.95□□□□□ -1.78
SMARCE1-208ENST00000474246 K7EIL1 84 aa3.95□□□□□ -1.78
SMARCE1-208ENST00000474246 Q1RN00 199 aa3.95□□□□□ -1.78
SMARCE1-208ENST00000474246 UBALD1Q8TB05 177 aa3.95□□□□□ -1.78
SMARCE1-208ENST00000474246 SPTBP11277 2137 aa3.95□□□□□ -1.78
SMARCE1-208ENST00000474246 TRAV10A0A0B4J240 114 aa3.94□□□□□ -1.78
SMARCE1-208ENST00000474246 PMS2P5A8MQ11 134 aa3.94□□□□□ -1.78
SMARCE1-208ENST00000474246 HIGD1CA8MV81 97 aa3.94□□□□□ -1.78
SMARCE1-208ENST00000474246 SPINK4O60575 86 aa3.94□□□□□ -1.78
SMARCE1-208ENST00000474246 IGHV3-30P01768 117 aa3.94□□□□□ -1.78
SMARCE1-208ENST00000474246 IGHV3-30-5P0DP03 117 aa3.94□□□□□ -1.78
SMARCE1-208ENST00000474246 ELOF1P60002 83 aaKnown RBP3.94□□□□□ -1.78
SMARCE1-208ENST00000474246 A0A096LNJ9 63 aa3.94□□□□□ -1.78
SMARCE1-208ENST00000474246 IGHV1-18A0A0C4DH31 117 aa3.94□□□□□ -1.78
SMARCE1-208ENST00000474246 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.94□□□□□ -1.78
SMARCE1-208ENST00000474246 ZNRD1Q9P1U0 126 aa3.94□□□□□ -1.78
SMARCE1-208ENST00000474246 HEATR5BQ9P2D3 2071 aa3.93□□□□□ -1.78
SMARCE1-208ENST00000474246 DNAH9Q9NYC9 4486 aa3.93□□□□□ -1.78
SMARCE1-208ENST00000474246 P0C880 135 aa3.93□□□□□ -1.78
SMARCE1-208ENST00000474246 PATE4P0C8F1 98 aa3.93□□□□□ -1.78
SMARCE1-208ENST00000474246 FAM74A4Q5TZK3 123 aa3.93□□□□□ -1.78
SMARCE1-208ENST00000474246 SMIM29Q86T20 159 aa3.93□□□□□ -1.78
SMARCE1-208ENST00000474246 KRTAP9-3Q9BYQ3 159 aa3.93□□□□□ -1.78
SMARCE1-208ENST00000474246 GFRA4Q9GZZ7 299 aa3.93□□□□□ -1.78
SMARCE1-208ENST00000474246 LENEPQ9Y5L5 61 aa3.93□□□□□ -1.78
SMARCE1-208ENST00000474246 Q8TAT8 98 aa3.92□□□□□ -1.78
SMARCE1-208ENST00000474246 ORMDL1Q9P0S3 153 aa3.92□□□□□ -1.78
SMARCE1-208ENST00000474246 IGLV1-47P01700 117 aa3.92□□□□□ -1.78
SMARCE1-208ENST00000474246 CSAG1Q6PB30 78 aa3.92□□□□□ -1.78
SMARCE1-208ENST00000474246 LINC00846Q9NV44 126 aa3.92□□□□□ -1.78
SMARCE1-208ENST00000474246 TRBV10-1A0A0K0K1A3 114 aa3.91□□□□□ -1.78
SMARCE1-208ENST00000474246 TRBV6-5A0A0K0K1A5 114 aa3.91□□□□□ -1.78
SMARCE1-208ENST00000474246 LINC01546A6NGU7 62 aa3.91□□□□□ -1.78
SMARCE1-208ENST00000474246 TMEM14AQ9Y6G1 99 aa3.91□□□□□ -1.78
SMARCE1-208ENST00000474246 LINC00483Q53H64 154 aa3.91□□□□□ -1.78
SMARCE1-208ENST00000474246 Q8NAQ8 132 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms