RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 TRANK1O15050 2925 aa-1.61□□□□□ -2.67
MDM2-216ENST00000471946 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.62□□□□□ -2.67
MDM2-216ENST00000471946 A0A1B0GV90 55 aa-1.62□□□□□ -2.67
MDM2-216ENST00000471946 C7orf77A4D0Y5 90 aa-1.62□□□□□ -2.67
MDM2-216ENST00000471946 H3BQF6 201 aa-1.62□□□□□ -2.67
MDM2-216ENST00000471946 DLEU1O43261 78 aa-1.62□□□□□ -2.67
MDM2-216ENST00000471946 DEFB107AQ8IZN7 70 aa-1.62□□□□□ -2.67
MDM2-216ENST00000471946 NCOA3Q9Y6Q9 1424 aa-1.63□□□□□ -2.67
MDM2-216ENST00000471946 TNRC18O15417 2968 aaPredicted RBP-1.63□□□□□ -2.67
MDM2-216ENST00000471946 H0Y9P7 68 aa-1.63□□□□□ -2.67
MDM2-216ENST00000471946 MRPL34Q9BQ48 92 aaKnown RBP-1.63□□□□□ -2.67
MDM2-216ENST00000471946 NEBP20929 6669 aa-1.63□□□□□ -2.67
MDM2-216ENST00000471946 PKD1L3Q7Z443 1732 aa-1.63□□□□□ -2.67
MDM2-216ENST00000471946 TACC2O95359 2948 aa-1.63□□□□□ -2.67
MDM2-216ENST00000471946 H3BQ15 152 aa-1.64□□□□□ -2.67
MDM2-216ENST00000471946 KRTDAPP60985 99 aa-1.64□□□□□ -2.67
MDM2-216ENST00000471946 CGREF1Q99674 301 aa-1.64□□□□□ -2.67
MDM2-216ENST00000471946 VAMP8Q9BV40 100 aa-1.64□□□□□ -2.67
MDM2-216ENST00000471946 QSER1Q2KHR3 1735 aa-1.64□□□□□ -2.67
MDM2-216ENST00000471946 A0A0G2JND7 137 aa-1.65□□□□□ -2.67
MDM2-216ENST00000471946 hADV29S1A0JD25 119 aa-1.65□□□□□ -2.67
MDM2-216ENST00000471946 TMEM262E9PQX1 116 aa-1.65□□□□□ -2.67
MDM2-216ENST00000471946 ASIPP42127 132 aa-1.65□□□□□ -2.67
MDM2-216ENST00000471946 LELP1Q5T871 98 aa-1.65□□□□□ -2.67
MDM2-216ENST00000471946 ZZEF1O43149 2961 aa-1.66□□□□□ -2.67
MDM2-216ENST00000471946 CORTO00230 105 aa-1.66□□□□□ -2.68
MDM2-216ENST00000471946 S100A1P23297 94 aa-1.66□□□□□ -2.68
MDM2-216ENST00000471946 CRYBG1Q9Y4K1 1723 aa-1.66□□□□□ -2.68
MDM2-216ENST00000471946 GNGT1P63211 74 aa-1.67□□□□□ -2.68
MDM2-216ENST00000471946 HEPN1Q6WQI6 88 aa-1.67□□□□□ -2.68
MDM2-216ENST00000471946 DNAH3Q8TD57 4116 aa-1.68□□□□□ -2.68
MDM2-216ENST00000471946 TEP1Q99973 2627 aaKnown RBP-1.69□□□□□ -2.68
MDM2-216ENST00000471946 TRAV30A0A087WSZ9 112 aa-1.69□□□□□ -2.68
MDM2-216ENST00000471946 CCL22O00626 93 aa-1.69□□□□□ -2.68
MDM2-216ENST00000471946 PSMG4Q5JS54 123 aa-1.69□□□□□ -2.68
MDM2-216ENST00000471946 EPPK1P58107 5090 aaKnown RBP-1.69□□□□□ -2.68
MDM2-216ENST00000471946 ABCC5O15440 1437 aa-1.69□□□□□ -2.68
MDM2-216ENST00000471946 MUC17Q685J3 4493 aa-1.7□□□□□ -2.68
MDM2-216ENST00000471946 HYDINQ4G0P3 5121 aa-1.7□□□□□ -2.68
MDM2-216ENST00000471946 PKHD1L1Q86WI1 4243 aa-1.7□□□□□ -2.68
MDM2-216ENST00000471946 CICQ96RK0 1608 aaPredicted RBP-1.7□□□□□ -2.68
MDM2-216ENST00000471946 MLH3Q9UHC1 1453 aa-1.7□□□□□ -2.68
MDM2-216ENST00000471946 USP9YO00507 2555 aaPredicted RBP-1.7□□□□□ -2.68
MDM2-216ENST00000471946 PREX1Q8TCU6 1659 aa-1.71□□□□□ -2.68
MDM2-216ENST00000471946 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.71□□□□□ -2.684e-10■■■■□ 22.6
MDM2-216ENST00000471946 C4AP0C0L4 1744 aa-1.71□□□□□ -2.68
MDM2-216ENST00000471946 C4BP0C0L5 1744 aa-1.71□□□□□ -2.68
MDM2-216ENST00000471946 CACFD1Q9UGQ2 172 aa-1.71□□□□□ -2.68
MDM2-216ENST00000471946 SAMD9Q5K651 1589 aa-1.72□□□□□ -2.68
MDM2-216ENST00000471946 CUBNO60494 3623 aa-1.72□□□□□ -2.68
MDM2-216ENST00000471946 SPTY2D1-AS1A0A0U1RR47 76 aa-1.72□□□□□ -2.68
MDM2-216ENST00000471946 EFCAB10A6NFE3 127 aa-1.72□□□□□ -2.68
MDM2-216ENST00000471946 H0YGG7 62 aa-1.72□□□□□ -2.68
MDM2-216ENST00000471946 ARMS2P0C7Q2 107 aa-1.72□□□□□ -2.68
MDM2-216ENST00000471946 SPRR2FQ96RM1 72 aa-1.72□□□□□ -2.68
MDM2-216ENST00000471946 VPS13DQ5THJ4 4388 aa-1.73□□□□□ -2.69
MDM2-216ENST00000471946 TRBV25-1A0A075B6N4 114 aa-1.73□□□□□ -2.69
MDM2-216ENST00000471946 WFDC13Q8IUB5 93 aa-1.73□□□□□ -2.69
MDM2-216ENST00000471946 ITPR3Q14573 2671 aa-1.73□□□□□ -2.69
MDM2-216ENST00000471946 MYH4Q9Y623 1939 aa-1.74□□□□□ -2.69
MDM2-216ENST00000471946 FAM135AQ9P2D6 1515 aa-1.74□□□□□ -2.69
MDM2-216ENST00000471946 CDKN2A-AS1Q9UH64 79 aa-1.74□□□□□ -2.69
MDM2-216ENST00000471946 GNG8Q9UK08 70 aa-1.74□□□□□ -2.69
MDM2-216ENST00000471946 DNAH9Q9NYC9 4486 aa-1.74□□□□□ -2.69
MDM2-216ENST00000471946 CLIP1P30622 1438 aa-1.74□□□□□ -2.69
MDM2-216ENST00000471946 UBR3Q6ZT12 1888 aa-1.75□□□□□ -2.69
MDM2-216ENST00000471946 PDE4DIPQ5VU43 2346 aa-1.75□□□□□ -2.69
MDM2-216ENST00000471946 TRBV7-7A0A0K0K1E9 115 aa-1.75□□□□□ -2.69
MDM2-216ENST00000471946 PMCHL1Q16048 86 aa-1.75□□□□□ -2.69
MDM2-216ENST00000471946 GTF2H5Q6ZYL4 71 aa-1.75□□□□□ -2.69
MDM2-216ENST00000471946 CLTCQ00610 1675 aaKnown RBP-1.76□□□□□ -2.69
MDM2-216ENST00000471946 ZFYVE16Q7Z3T8 1539 aa-1.76□□□□□ -2.69
MDM2-216ENST00000471946 ABCC2Q92887 1545 aa-1.76□□□□□ -2.69
MDM2-216ENST00000471946 HECTD1Q9ULT8 2610 aa-1.77□□□□□ -2.69
MDM2-216ENST00000471946 TROQ12816 1431 aaPredicted RBP-1.77□□□□□ -2.69
MDM2-216ENST00000471946 PRDM15P57071 1507 aaPredicted RBP-1.77□□□□□ -2.69
MDM2-216ENST00000471946 RYR1P21817 5038 aa-1.77□□□□□ -2.69
MDM2-216ENST00000471946 DMXL1Q9Y485 3027 aa-1.77□□□□□ -2.69
MDM2-216ENST00000471946 NDUFC1O43677 76 aa-1.78□□□□□ -2.69
MDM2-216ENST00000471946 HIGD1BQ9P298 99 aa-1.78□□□□□ -2.69
MDM2-216ENST00000471946 RAPGEF2Q9Y4G8 1499 aa-1.78□□□□□ -2.69
MDM2-216ENST00000471946 LAMA1P25391 3075 aa-1.78□□□□□ -2.69
MDM2-216ENST00000471946 DOPEY1Q5JWR5 2465 aa-1.79□□□□□ -2.7
MDM2-216ENST00000471946 H7BZZ5 65 aa-1.79□□□□□ -2.7
MDM2-216ENST00000471946 UQCRHP07919 91 aa-1.79□□□□□ -2.7
MDM2-216ENST00000471946 TMEM203Q969S6 136 aa-1.79□□□□□ -2.7
MDM2-216ENST00000471946 C2orf88Q9BSF0 95 aa-1.79□□□□□ -2.7
MDM2-216ENST00000471946 RYR3Q15413 4870 aa-1.79□□□□□ -2.7
MDM2-216ENST00000471946 BIRC6Q9NR09 4857 aa-1.79□□□□□ -2.7
MDM2-216ENST00000471946 VPS13BQ7Z7G8 4022 aa-1.8□□□□□ -2.7
MDM2-216ENST00000471946 TIAM2Q8IVF5 1701 aa-1.8□□□□□ -2.7
MDM2-216ENST00000471946 NRXN1Q9ULB1 1477 aa-1.8□□□□□ -2.7
MDM2-216ENST00000471946 GNGT2O14610 69 aa-1.8□□□□□ -2.7
MDM2-216ENST00000471946 MRPS10P82664 201 aaKnown RBP-1.8□□□□□ -2.7
MDM2-216ENST00000471946 FASNP49327 2511 aaKnown RBP-1.81□□□□□ -2.7
MDM2-216ENST00000471946 LINC00587B1AMM8 73 aa-1.82□□□□□ -2.7
MDM2-216ENST00000471946 ALKQ9UM73 1620 aa-1.82□□□□□ -2.7
MDM2-216ENST00000471946 RGPD3A6NKT7 1758 aaPredicted RBP-1.82□□□□□ -2.7
MDM2-216ENST00000471946 RGPD4Q7Z3J3 1758 aa-1.82□□□□□ -2.7
MDM2-216ENST00000471946 TRGV9Q99603 122 aa-1.83□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms