RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 LBHQ53QV2 105 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC3-206ENST00000469757 SPINK6Q6UWN8 80 aa5.09□□□□□ -1.59
TRAPPC3-206ENST00000469757 MRPL55Q7Z7F7 128 aaKnown RBP5.09□□□□□ -1.59
TRAPPC3-206ENST00000469757 HIST3H2BBQ8N257 126 aa5.09□□□□□ -1.59
TRAPPC3-206ENST00000469757 C22orf24Q9Y442 160 aa5.09□□□□□ -1.59
TRAPPC3-206ENST00000469757 LINC00587B1AMM8 73 aa5.08□□□□□ -1.6
TRAPPC3-206ENST00000469757 Q8NDZ9 215 aa5.08□□□□□ -1.6
TRAPPC3-206ENST00000469757 HIST1H2BLQ99880 126 aa5.08□□□□□ -1.6
TRAPPC3-206ENST00000469757 LOC107984156A0A0G2JMH3 177 aa5.07□□□□□ -1.6
TRAPPC3-206ENST00000469757 IGLV7-43P04211 117 aa5.07□□□□□ -1.6
TRAPPC3-206ENST00000469757 AKR1D1P51857 326 aa5.07□□□□□ -1.6
TRAPPC3-206ENST00000469757 KRTDAPP60985 99 aa5.07□□□□□ -1.6
TRAPPC3-206ENST00000469757 UBE2BP63146 152 aa5.07□□□□□ -1.6
TRAPPC3-206ENST00000469757 ARL17AQ8IVW1 177 aa5.07□□□□□ -1.6
TRAPPC3-206ENST00000469757 LRP1Q07954 4544 aaKnown RBP5.07□□□□□ -1.6
TRAPPC3-206ENST00000469757 C20orf202A1L168 122 aa5.06□□□□□ -1.6
TRAPPC3-206ENST00000469757 SMIM13P0DJ93 91 aa5.06□□□□□ -1.6
TRAPPC3-206ENST00000469757 MT1HL1P0DM35 61 aa5.06□□□□□ -1.6
TRAPPC3-206ENST00000469757 LGALS3P17931 250 aaKnown RBP5.06□□□□□ -1.6
TRAPPC3-206ENST00000469757 RPL24P83731 157 aaKnown RBP5.06□□□□□ -1.6
TRAPPC3-206ENST00000469757 C1orf137Q5JT78 98 aa5.06□□□□□ -1.6
TRAPPC3-206ENST00000469757 MIR7-3HGQ8N6C7 128 aa5.06□□□□□ -1.6
TRAPPC3-206ENST00000469757 NKAPP1Q8N9T2 125 aa5.06□□□□□ -1.6
TRAPPC3-206ENST00000469757 LINC00167Q96N53 147 aa5.06□□□□□ -1.6
TRAPPC3-206ENST00000469757 FAT3Q8TDW7 4589 aa5.06□□□□□ -1.6
TRAPPC3-206ENST00000469757 TIMM17BO60830 172 aa5.05□□□□□ -1.6
TRAPPC3-206ENST00000469757 LINC00158P58513 81 aa5.05□□□□□ -1.6
TRAPPC3-206ENST00000469757 MEIG1Q5JSS6 88 aa5.05□□□□□ -1.6
TRAPPC3-206ENST00000469757 KRTAP13-1Q8IUC0 172 aa5.05□□□□□ -1.6
TRAPPC3-206ENST00000469757 IGLV1-50A0A075B6I6 118 aa5.04□□□□□ -1.6
TRAPPC3-206ENST00000469757 IGKV2D-26A0A0A0MRZ7 120 aa5.04□□□□□ -1.6
TRAPPC3-206ENST00000469757 A0A0J9YXY3 114 aa5.04□□□□□ -1.6
TRAPPC3-206ENST00000469757 H0Y9J4 135 aa5.04□□□□□ -1.6
TRAPPC3-206ENST00000469757 BCE1O60756 84 aa5.04□□□□□ -1.6
TRAPPC3-206ENST00000469757 REG3GQ6UW15 175 aa5.04□□□□□ -1.6
TRAPPC3-206ENST00000469757 DIRC1Q969H9 104 aa5.04□□□□□ -1.6
TRAPPC3-206ENST00000469757 LINC01600Q96MT4 127 aa5.04□□□□□ -1.6
TRAPPC3-206ENST00000469757 LITAFQ99732 161 aa5.04□□□□□ -1.6
TRAPPC3-206ENST00000469757 C5orf52A6NGY3 159 aa5.03□□□□□ -1.6
TRAPPC3-206ENST00000469757 J3QL48 77 aa5.03□□□□□ -1.6
TRAPPC3-206ENST00000469757 S100A6P06703 90 aa5.03□□□□□ -1.6
TRAPPC3-206ENST00000469757 S100A2P29034 98 aa5.03□□□□□ -1.6
TRAPPC3-206ENST00000469757 A0A0U1RRA0 63 aa5.02□□□□□ -1.61
TRAPPC3-206ENST00000469757 GAGE10A6NGK3 116 aa5.02□□□□□ -1.61
TRAPPC3-206ENST00000469757 RPL37AP8A6NKH3 93 aa5.02□□□□□ -1.61
TRAPPC3-206ENST00000469757 M0R378 163 aa5.02□□□□□ -1.61
TRAPPC3-206ENST00000469757 ZNF861PO60384 105 aa5.02□□□□□ -1.61
TRAPPC3-206ENST00000469757 NDUFC2O95298 119 aa5.02□□□□□ -1.61
TRAPPC3-206ENST00000469757 KRTAP1-4P0C5Y4 121 aa5.02□□□□□ -1.61
TRAPPC3-206ENST00000469757 SNRPEP62304 92 aaKnown RBP5.02□□□□□ -1.61
TRAPPC3-206ENST00000469757 BOD1L2Q8IYS8 172 aa5.02□□□□□ -1.61
TRAPPC3-206ENST00000469757 PPDPFQ9H3Y8 114 aa5.02□□□□□ -1.61
TRAPPC3-206ENST00000469757 IGKV2-28A0A075B6P5 120 aa5.01□□□□□ -1.61
TRAPPC3-206ENST00000469757 TRBV10-2A0A0K0K1G8 114 aa5.01□□□□□ -1.61
TRAPPC3-206ENST00000469757 ZNF815PA8K554 130 aa5.01□□□□□ -1.61
TRAPPC3-206ENST00000469757 IGKV2D-28P01615 120 aa5.01□□□□□ -1.61
TRAPPC3-206ENST00000469757 RPL28P46779 137 aaKnown RBP5.01□□□□□ -1.61
TRAPPC3-206ENST00000469757 ANKRD39Q53RE8 183 aa5.01□□□□□ -1.61
TRAPPC3-206ENST00000469757 ADAMTSL4-AS1Q5T5F5 129 aa5.01□□□□□ -1.61
TRAPPC3-206ENST00000469757 SOSTDC1Q6X4U4 206 aa5.01□□□□□ -1.61
TRAPPC3-206ENST00000469757 DAND5Q8N907 189 aa5.01□□□□□ -1.61
TRAPPC3-206ENST00000469757 TMEM126AQ9H061 195 aa5.01□□□□□ -1.61
TRAPPC3-206ENST00000469757 SPANXB1Q9NS25 103 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC3-206ENST00000469757 TNXBP22105 4242 aa5.01□□□□□ -1.61
TRAPPC3-206ENST00000469757 HERC1Q15751 4861 aa5.01□□□□□ -1.61
TRAPPC3-206ENST00000469757 PRYO14603 147 aa5□□□□□ -1.61
TRAPPC3-206ENST00000469757 EIF4EBP3O60516 100 aaPredicted RBP5□□□□□ -1.61
TRAPPC3-206ENST00000469757 SPRR1AP35321 89 aa5□□□□□ -1.61
TRAPPC3-206ENST00000469757 ATOH7Q8N100 152 aa5□□□□□ -1.61
TRAPPC3-206ENST00000469757 TTTY13Q9BZ97 58 aa5□□□□□ -1.61
TRAPPC3-206ENST00000469757 KCNQ1DNQ9H478 68 aa5□□□□□ -1.61
TRAPPC3-206ENST00000469757 TMEM238C9JI98 176 aa4.99□□□□□ -1.61
TRAPPC3-206ENST00000469757 KRTAP4-16G5E9R7 235 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC3-206ENST00000469757 KRTAP10-8P60410 259 aa4.99□□□□□ -1.61
TRAPPC3-206ENST00000469757 MIEN1Q9BRT3 115 aa4.99□□□□□ -1.61
TRAPPC3-206ENST00000469757 SPANXDQ9BXN6 97 aa4.99□□□□□ -1.61
TRAPPC3-206ENST00000469757 SPANXCQ9NY87 97 aa4.99□□□□□ -1.61
TRAPPC3-206ENST00000469757 NCR3O14931 201 aa4.98□□□□□ -1.61
TRAPPC3-206ENST00000469757 IGLV6-57P01721 117 aa4.98□□□□□ -1.61
TRAPPC3-206ENST00000469757 LINC00337Q8N6G1 96 aa4.98□□□□□ -1.61
TRAPPC3-206ENST00000469757 LINC00308Q8TCZ7 52 aa4.98□□□□□ -1.61
TRAPPC3-206ENST00000469757 TRBV10-3A0A0K0K1G6 114 aa4.97□□□□□ -1.61
TRAPPC3-206ENST00000469757 PCP2Q8IVA1 136 aa4.97□□□□□ -1.61
TRAPPC3-206ENST00000469757 UBE2AP49459 152 aa4.96□□□□□ -1.62
TRAPPC3-206ENST00000469757 PRLHP81277 87 aa4.96□□□□□ -1.62
TRAPPC3-206ENST00000469757 Q6ZVH6 145 aa4.96□□□□□ -1.62
TRAPPC3-206ENST00000469757 HSBP1L1C9JCN9 74 aa4.95□□□□□ -1.62
TRAPPC3-206ENST00000469757 IFITM1P13164 125 aa4.95□□□□□ -1.62
TRAPPC3-206ENST00000469757 DDTP30046 118 aa4.95□□□□□ -1.62
TRAPPC3-206ENST00000469757 RPL13AP40429 203 aaKnown RBP4.95□□□□□ -1.62
TRAPPC3-206ENST00000469757 SCGB1D4Q6XE38 83 aa4.95□□□□□ -1.62
TRAPPC3-206ENST00000469757 FAM19A1Q7Z5A9 133 aa4.95□□□□□ -1.62
TRAPPC3-206ENST00000469757 COPS9Q8WXC6 57 aa4.95□□□□□ -1.62
TRAPPC3-206ENST00000469757 FAM229BQ4G0N7 80 aa4.94□□□□□ -1.62
TRAPPC3-206ENST00000469757 TRAV23DV6A0A075B6W5 121 aa4.93□□□□□ -1.62
TRAPPC3-206ENST00000469757 NPC2P61916 151 aa4.93□□□□□ -1.62
TRAPPC3-206ENST00000469757 S100A12P80511 92 aa4.93□□□□□ -1.62
TRAPPC3-206ENST00000469757 Q6ZRX8 168 aa4.93□□□□□ -1.62
TRAPPC3-206ENST00000469757 PRR26Q8N8Z3 221 aa4.93□□□□□ -1.62
TRAPPC3-206ENST00000469757 CBY1Q9Y3M2 126 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms