RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 ENHOQ6UWT2 76 aa4.18□□□□□ -1.74
SHQ1-205ENST00000468371 AMELXQ99217 191 aa4.18□□□□□ -1.74
SHQ1-205ENST00000468371 EIF4EBP3O60516 100 aaPredicted RBP4.18□□□□□ -1.74
SHQ1-205ENST00000468371 USP17L23D6RBM5 183 aa4.18□□□□□ -1.74
SHQ1-205ENST00000468371 FAM240AA0A1B0GVK7 77 aa4.17□□□□□ -1.74
SHQ1-205ENST00000468371 TIMM17BO60830 172 aa4.17□□□□□ -1.74
SHQ1-205ENST00000468371 SCXQ7RTU7 201 aa4.17□□□□□ -1.74
SHQ1-205ENST00000468371 IMUPQ9GZP8 106 aa4.17□□□□□ -1.74
SHQ1-205ENST00000468371 APLNQ9ULZ1 77 aa4.17□□□□□ -1.74
SHQ1-205ENST00000468371 A0A087WYN8 130 aa4.17□□□□□ -1.74
SHQ1-205ENST00000468371 NBDYA0A0U1RRE5 68 aa4.17□□□□□ -1.74
SHQ1-205ENST00000468371 SMIM1B2RUZ4 78 aa4.17□□□□□ -1.74
SHQ1-205ENST00000468371 CXCL5P42830 114 aa4.17□□□□□ -1.74
SHQ1-205ENST00000468371 TENM2Q9NT68 2774 aa4.17□□□□□ -1.74
SHQ1-205ENST00000468371 PRR3P79522 188 aaKnown RBP4.17□□□□□ -1.74
SHQ1-205ENST00000468371 RPL18AQ02543 176 aaKnown RBP4.17□□□□□ -1.74
SHQ1-205ENST00000468371 CSNK1G2-AS1Q8NCQ2 148 aa4.16□□□□□ -1.74
SHQ1-205ENST00000468371 FAM19A5Q7Z5A7 132 aaPredicted RBP4.16□□□□□ -1.74
SHQ1-205ENST00000468371 KLK12Q9UKR0 248 aa4.16□□□□□ -1.74
SHQ1-205ENST00000468371 LINC00526Q96FQ7 95 aa4.16□□□□□ -1.74
SHQ1-205ENST00000468371 UPK3BQ9BT76 320 aa4.16□□□□□ -1.74
SHQ1-205ENST00000468371 TRBV10-1A0A0K0K1A3 114 aa4.15□□□□□ -1.74
SHQ1-205ENST00000468371 C14orf177Q52M58 125 aa4.15□□□□□ -1.74
SHQ1-205ENST00000468371 SERP2Q8N6R1 65 aa4.15□□□□□ -1.74
SHQ1-205ENST00000468371 DEFB105AQ8NG35 78 aa4.15□□□□□ -1.74
SHQ1-205ENST00000468371 GIG44P09565 113 aaPredicted RBP4.15□□□□□ -1.75
SHQ1-205ENST00000468371 C5orf47Q569G3 176 aa4.15□□□□□ -1.75
SHQ1-205ENST00000468371 HRCT1Q6UXD1 115 aa4.15□□□□□ -1.75
SHQ1-205ENST00000468371 FAM19A4Q96LR4 140 aa4.15□□□□□ -1.75
SHQ1-205ENST00000468371 JMJD7-PLA2G4BH0Y9G9 81 aa4.15□□□□□ -1.75
SHQ1-205ENST00000468371 LINC00269Q8N2A0 174 aa4.15□□□□□ -1.75
SHQ1-205ENST00000468371 FAM218AQ96MZ4 157 aa4.15□□□□□ -1.75
SHQ1-205ENST00000468371 CDC42SE2Q9NRR3 84 aa4.15□□□□□ -1.75
SHQ1-205ENST00000468371 SNURFQ9Y675 71 aa4.15□□□□□ -1.75
SHQ1-205ENST00000468371 TRBV6-4A0A1B0GX49 114 aa4.14□□□□□ -1.75
SHQ1-205ENST00000468371 SOSTDC1Q6X4U4 206 aa4.14□□□□□ -1.75
SHQ1-205ENST00000468371 LINC00846Q9NV44 126 aa4.14□□□□□ -1.75
SHQ1-205ENST00000468371 TMEM256-PLSCR3K7ERE1 68 aa4.14□□□□□ -1.75
SHQ1-205ENST00000468371 C6orf99Q4VX62 202 aa4.14□□□□□ -1.75
SHQ1-205ENST00000468371 LINC00337Q8N6G1 96 aa4.14□□□□□ -1.75
SHQ1-205ENST00000468371 TRBV7-7A0A0K0K1E9 115 aa4.14□□□□□ -1.75
SHQ1-205ENST00000468371 ESRGQ1W209 222 aa4.14□□□□□ -1.75
SHQ1-205ENST00000468371 LITAFQ99732 161 aa4.14□□□□□ -1.75
SHQ1-205ENST00000468371 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.13□□□□□ -1.75
SHQ1-205ENST00000468371 H3BNG1 76 aa4.13□□□□□ -1.75
SHQ1-205ENST00000468371 ZNF561-AS1K7EIQ3 104 aa4.13□□□□□ -1.75
SHQ1-205ENST00000468371 IGLV5-52A0A0A0MRZ9 124 aa4.13□□□□□ -1.75
SHQ1-205ENST00000468371 LELP1Q5T871 98 aa4.13□□□□□ -1.75
SHQ1-205ENST00000468371 LINC00588Q9Y4M8 146 aa4.13□□□□□ -1.75
SHQ1-205ENST00000468371 IGLV4-60A0A075B6I1 120 aa4.13□□□□□ -1.75
SHQ1-205ENST00000468371 IBA57-AS1B1ANH7 110 aa4.13□□□□□ -1.75
SHQ1-205ENST00000468371 SMCR5Q8TEV8 140 aa4.13□□□□□ -1.75
SHQ1-205ENST00000468371 MEGF8Q7Z7M0 2845 aa4.13□□□□□ -1.75
SHQ1-205ENST00000468371 DNHD1Q96M86 4753 aa4.13□□□□□ -1.75
SHQ1-205ENST00000468371 LYPD5Q6UWN5 251 aa4.12□□□□□ -1.75
SHQ1-205ENST00000468371 FAM19A1Q7Z5A9 133 aa4.12□□□□□ -1.75
SHQ1-205ENST00000468371 CSDC2Q9Y534 153 aaKnown RBP4.12□□□□□ -1.75
SHQ1-205ENST00000468371 TRBV6-8A0A0A6YYG3 113 aa4.12□□□□□ -1.75
SHQ1-205ENST00000468371 FHL2Q14192 279 aa4.12□□□□□ -1.75
SHQ1-205ENST00000468371 C9orf116Q5BN46 136 aaPredicted RBP4.12□□□□□ -1.75
SHQ1-205ENST00000468371 XAGE1AQ9HD64 81 aa4.12□□□□□ -1.75
SHQ1-205ENST00000468371 FAM236DA0A1B0GTK5 79 aa4.12□□□□□ -1.75
SHQ1-205ENST00000468371 FAM236CP0DP71 79 aa4.12□□□□□ -1.75
SHQ1-205ENST00000468371 RPL28P46779 137 aaKnown RBP4.12□□□□□ -1.75
SHQ1-205ENST00000468371 TMEM258P61165 79 aa4.12□□□□□ -1.75
SHQ1-205ENST00000468371 PKIGQ9Y2B9 76 aa4.12□□□□□ -1.75
SHQ1-205ENST00000468371 SPAG11BQ08648 103 aa4.11□□□□□ -1.75
SHQ1-205ENST00000468371 MPLKIPQ8TAP9 179 aa4.11□□□□□ -1.75
SHQ1-205ENST00000468371 A0A0U1RQV1 116 aa4.11□□□□□ -1.75
SHQ1-205ENST00000468371 A8MTW9 85 aa4.11□□□□□ -1.75
SHQ1-205ENST00000468371 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
SHQ1-205ENST00000468371 TRRAPQ9Y4A5 3859 aa4.11□□□□□ -1.75
SHQ1-205ENST00000468371 FAM229AH3BQW9 127 aa4.11□□□□□ -1.75
SHQ1-205ENST00000468371 Q6JHZ5 121 aa4.11□□□□□ -1.75
SHQ1-205ENST00000468371 LINC00959A0A1B0GUT2 108 aa4.1□□□□□ -1.75
SHQ1-205ENST00000468371 NTM-AS1Q6ZSK4 140 aa4.1□□□□□ -1.75
SHQ1-205ENST00000468371 Q6ZQY7 126 aa4.1□□□□□ -1.75
SHQ1-205ENST00000468371 WFDC10BQ8IUB3 73 aa4.1□□□□□ -1.75
SHQ1-205ENST00000468371 CHCHD10Q8WYQ3 142 aaPredicted RBP4.1□□□□□ -1.75
SHQ1-205ENST00000468371 IGLV5-39A0A0G2JS06 123 aa4.09□□□□□ -1.75
SHQ1-205ENST00000468371 NREPQ16612 68 aa4.09□□□□□ -1.75
SHQ1-205ENST00000468371 HIGD2BQ4VC39 106 aa4.09□□□□□ -1.75
SHQ1-205ENST00000468371 REG3AQ06141 175 aa4.09□□□□□ -1.75
SHQ1-205ENST00000468371 C11orf72Q8NBR9 251 aa4.09□□□□□ -1.75
SHQ1-205ENST00000468371 CAMK2N2Q96S95 79 aa4.09□□□□□ -1.75
SHQ1-205ENST00000468371 CCKP06307 115 aa4.09□□□□□ -1.76
SHQ1-205ENST00000468371 NKAPP1Q8N9T2 125 aa4.08□□□□□ -1.76
SHQ1-205ENST00000468371 C4orf26Q17RF5 130 aa4.08□□□□□ -1.76
SHQ1-205ENST00000468371 DIRC1Q969H9 104 aa4.08□□□□□ -1.76
SHQ1-205ENST00000468371 Q8N814 137 aa4.07□□□□□ -1.76
SHQ1-205ENST00000468371 F8WEM9 126 aa4.07□□□□□ -1.76
SHQ1-205ENST00000468371 NDUFC2O95298 119 aa4.07□□□□□ -1.76
SHQ1-205ENST00000468371 IGKV2-28A0A075B6P5 120 aa4.06□□□□□ -1.76
SHQ1-205ENST00000468371 A0A087WZ39 114 aa4.06□□□□□ -1.76
SHQ1-205ENST00000468371 IGKV2D-28P01615 120 aa4.06□□□□□ -1.76
SHQ1-205ENST00000468371 COX7BP24311 80 aa4.06□□□□□ -1.76
SHQ1-205ENST00000468371 UNQ6190/PRO20217Q6UXQ8 127 aa4.06□□□□□ -1.76
SHQ1-205ENST00000468371 IGLV5-45A0A087WSX0 123 aa4.06□□□□□ -1.76
SHQ1-205ENST00000468371 CRYGAP11844 174 aa4.06□□□□□ -1.76
SHQ1-205ENST00000468371 TNP2Q05952 138 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms