RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ANGP03950 147 aaKnown RBP4.65□□□□□ -1.67
SCAF4-204ENST00000467731 ZNF22P17026 224 aaPredicted RBP4.65□□□□□ -1.67
SCAF4-204ENST00000467731 RPL18AQ02543 176 aaKnown RBP4.65□□□□□ -1.67
SCAF4-204ENST00000467731 LINC00476Q8WZB0 136 aa4.65□□□□□ -1.67
SCAF4-204ENST00000467731 CDC42SE2Q9NRR3 84 aa4.65□□□□□ -1.67
SCAF4-204ENST00000467731 DNAH2Q9P225 4427 aa4.64□□□□□ -1.67
SCAF4-204ENST00000467731 CLPSL2Q6UWE3 100 aa4.64□□□□□ -1.67
SCAF4-204ENST00000467731 COPS9Q8WXC6 57 aa4.64□□□□□ -1.67
SCAF4-204ENST00000467731 PRO1854Q9UHT4 67 aa4.64□□□□□ -1.67
SCAF4-204ENST00000467731 KLK12Q9UKR0 248 aa4.64□□□□□ -1.67
SCAF4-204ENST00000467731 C2orf82Q6UX34 121 aa4.64□□□□□ -1.67
SCAF4-204ENST00000467731 Q6ZRU5 148 aa4.64□□□□□ -1.67
SCAF4-204ENST00000467731 MRPL55Q7Z7F7 128 aaKnown RBP4.64□□□□□ -1.67
SCAF4-204ENST00000467731 TMEM141Q96I45 108 aa4.64□□□□□ -1.67
SCAF4-204ENST00000467731 LAMTOR3Q9UHA4 124 aa4.64□□□□□ -1.67
SCAF4-204ENST00000467731 MRPS36P82909 103 aaKnown RBP4.63□□□□□ -1.67
SCAF4-204ENST00000467731 FP248Q71RG6 208 aaPredicted RBP4.63□□□□□ -1.67
SCAF4-204ENST00000467731 LINC00269Q8N2A0 174 aa4.63□□□□□ -1.67
SCAF4-204ENST00000467731 FRAS1Q86XX4 4008 aa4.63□□□□□ -1.67
SCAF4-204ENST00000467731 IGKV3OR2-268A0A0C4DH90 116 aa4.63□□□□□ -1.67
SCAF4-204ENST00000467731 REG3AQ06141 175 aa4.63□□□□□ -1.67
SCAF4-204ENST00000467731 SDIM1Q6ZPB5 146 aa4.63□□□□□ -1.67
SCAF4-204ENST00000467731 KRTAP1-5Q9BYS1 174 aa4.63□□□□□ -1.67
SCAF4-204ENST00000467731 CFC1BP0CG36 223 aa4.62□□□□□ -1.67
SCAF4-204ENST00000467731 CFC1P0CG37 223 aa4.62□□□□□ -1.67
SCAF4-204ENST00000467731 PAPPA-AS1Q5QFB9 102 aa4.62□□□□□ -1.67
SCAF4-204ENST00000467731 PRR15Q8IV56 129 aa4.62□□□□□ -1.67
SCAF4-204ENST00000467731 AMELXQ99217 191 aa4.62□□□□□ -1.67
SCAF4-204ENST00000467731 PRR34Q9NV39 138 aa4.62□□□□□ -1.67
SCAF4-204ENST00000467731 NBDYA0A0U1RRE5 68 aa4.62□□□□□ -1.67
SCAF4-204ENST00000467731 CRPP02741 224 aa4.62□□□□□ -1.67
SCAF4-204ENST00000467731 PLNP26678 52 aa4.62□□□□□ -1.67
SCAF4-204ENST00000467731 ENHOQ6UWT2 76 aa4.62□□□□□ -1.67
SCAF4-204ENST00000467731 IGLV10-54A0A075B6I4 117 aa4.61□□□□□ -1.67
SCAF4-204ENST00000467731 A0A0B4J2C4 111 aa4.61□□□□□ -1.67
SCAF4-204ENST00000467731 IBA57-AS1B1ANH7 110 aa4.61□□□□□ -1.67
SCAF4-204ENST00000467731 M0R2N4 97 aa4.61□□□□□ -1.67
SCAF4-204ENST00000467731 Q9HAA7 133 aa4.61□□□□□ -1.67
SCAF4-204ENST00000467731 LINC00959A0A1B0GUT2 108 aa4.6□□□□□ -1.67
SCAF4-204ENST00000467731 SCGB1D4Q6XE38 83 aa4.6□□□□□ -1.67
SCAF4-204ENST00000467731 SMCR5Q8TEV8 140 aa4.6□□□□□ -1.67
SCAF4-204ENST00000467731 MIAQ16674 131 aa4.6□□□□□ -1.67
SCAF4-204ENST00000467731 MRPL35Q9NZE8 188 aaKnown RBP4.6□□□□□ -1.67
SCAF4-204ENST00000467731 TRAV12-1A0A0B4J245 112 aa4.59□□□□□ -1.67
SCAF4-204ENST00000467731 TRAV8-3A0A0A6YYJ7 113 aa4.59□□□□□ -1.67
SCAF4-204ENST00000467731 IGLV4-69A0A075B6H9 119 aa4.59□□□□□ -1.68
SCAF4-204ENST00000467731 IGKV2D-24A0A075B6R9 120 aa4.59□□□□□ -1.68
SCAF4-204ENST00000467731 A0A0J9YXV3 536 aa4.59□□□□□ -1.68
SCAF4-204ENST00000467731 LCE6AA0A183 80 aa4.59□□□□□ -1.68
SCAF4-204ENST00000467731 XCL1P47992 114 aa4.59□□□□□ -1.68
SCAF4-204ENST00000467731 SS18Q15532 418 aa4.59□□□□□ -1.68
SCAF4-204ENST00000467731 LINC00242Q5T6M2 205 aa4.59□□□□□ -1.68
SCAF4-204ENST00000467731 Q6ZR54 194 aa4.59□□□□□ -1.68
SCAF4-204ENST00000467731 TRBV30A0A0K0K1B3 111 aa4.58□□□□□ -1.68
SCAF4-204ENST00000467731 ZNF815PA8K554 130 aa4.58□□□□□ -1.68
SCAF4-204ENST00000467731 F8VRH5 84 aa4.58□□□□□ -1.68
SCAF4-204ENST00000467731 H3BS24 57 aa4.58□□□□□ -1.68
SCAF4-204ENST00000467731 COX6A2Q02221 97 aa4.58□□□□□ -1.68
SCAF4-204ENST00000467731 CHCHD10Q8WYQ3 142 aaPredicted RBP4.58□□□□□ -1.68
SCAF4-204ENST00000467731 RYR2Q92736 4967 aa4.58□□□□□ -1.68
SCAF4-204ENST00000467731 HECTD4Q9Y4D8 3996 aa4.58□□□□□ -1.68
SCAF4-204ENST00000467731 TRBV7-6A0A0J9YX20 115 aa4.58□□□□□ -1.68
SCAF4-204ENST00000467731 FAM19A3Q7Z5A8 133 aa4.58□□□□□ -1.68
SCAF4-204ENST00000467731 C11orf86A6NJI1 115 aa4.57□□□□□ -1.68
SCAF4-204ENST00000467731 IGHV3OR16-9A0A0B4J2B5 98 aa4.56□□□□□ -1.68
SCAF4-204ENST00000467731 TIMM17BO60830 172 aa4.56□□□□□ -1.68
SCAF4-204ENST00000467731 KRTAP26-1Q6PEX3 210 aa4.56□□□□□ -1.68
SCAF4-204ENST00000467731 CD164L2Q6UWJ8 174 aa4.56□□□□□ -1.68
SCAF4-204ENST00000467731 CDKN2A-AS1Q9UH64 79 aa4.56□□□□□ -1.68
SCAF4-204ENST00000467731 RYR3Q15413 4870 aa4.56□□□□□ -1.68
SCAF4-204ENST00000467731 DNAH17Q9UFH2 4485 aa4.56□□□□□ -1.68
SCAF4-204ENST00000467731 FAT2Q9NYQ8 4349 aa4.56□□□□□ -1.68
SCAF4-204ENST00000467731 USP17L23D6RBM5 183 aa4.56□□□□□ -1.68
SCAF4-204ENST00000467731 Q1RN00 199 aa4.56□□□□□ -1.68
SCAF4-204ENST00000467731 C6orf223Q8N319 242 aa4.56□□□□□ -1.68
SCAF4-204ENST00000467731 RMI2Q96E14 147 aa4.56□□□□□ -1.68
SCAF4-204ENST00000467731 IGLV5-45A0A087WSX0 123 aa4.55□□□□□ -1.68
SCAF4-204ENST00000467731 PSCAO43653 123 aa4.55□□□□□ -1.68
SCAF4-204ENST00000467731 COX6CP09669 75 aa4.55□□□□□ -1.68
SCAF4-204ENST00000467731 Q6ZRN7 208 aaPredicted RBP4.55□□□□□ -1.68
SCAF4-204ENST00000467731 RBM12B-AS1Q9P1G2 102 aa4.55□□□□□ -1.68
SCAF4-204ENST00000467731 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.55□□□□□ -1.68
SCAF4-204ENST00000467731 CCKP06307 115 aa4.55□□□□□ -1.68
SCAF4-204ENST00000467731 CIRBPQ14011 172 aaKnown RBP4.55□□□□□ -1.68
SCAF4-204ENST00000467731 C1orf134Q5TEV5 83 aa4.55□□□□□ -1.68
SCAF4-204ENST00000467731 LINC00474Q9P2X8 69 aa4.55□□□□□ -1.68
SCAF4-204ENST00000467731 A0A087WZ39 114 aa4.54□□□□□ -1.68
SCAF4-204ENST00000467731 COX7A2LO14548 114 aa4.54□□□□□ -1.68
SCAF4-204ENST00000467731 H7BZZ5 65 aa4.54□□□□□ -1.68
SCAF4-204ENST00000467731 DAND5Q8N907 189 aa4.54□□□□□ -1.68
SCAF4-204ENST00000467731 H7C2G1 150 aa4.53□□□□□ -1.68
SCAF4-204ENST00000467731 IGHV3-64A0A075B6Q5 118 aa4.53□□□□□ -1.68
SCAF4-204ENST00000467731 IGHV1-58A0A0C4DH39 117 aa4.53□□□□□ -1.68
SCAF4-204ENST00000467731 TMEM223A0PJW6 202 aa4.53□□□□□ -1.68
SCAF4-204ENST00000467731 SMIM1B2RUZ4 78 aa4.53□□□□□ -1.68
SCAF4-204ENST00000467731 LECT2O14960 151 aa4.53□□□□□ -1.68
SCAF4-204ENST00000467731 TRIAP1O43715 76 aa4.53□□□□□ -1.68
SCAF4-204ENST00000467731 VPREB1P12018 145 aa4.53□□□□□ -1.68
SCAF4-204ENST00000467731 ATP5EP56381 51 aaPredicted RBP4.53□□□□□ -1.68
SCAF4-204ENST00000467731 C15orf56Q8N910 161 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms