RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 Q8NAQ8 132 aa9.57□□□□□ -0.88
BRAT1-203ENST00000467558 FAM240AA0A1B0GVK7 77 aa9.57□□□□□ -0.88
BRAT1-203ENST00000467558 KRTAP1-3Q8IUG1 177 aa9.57□□□□□ -0.88
BRAT1-203ENST00000467558 M0QXV9 152 aa9.56□□□□□ -0.88
BRAT1-203ENST00000467558 ESRGQ1W209 222 aa9.56□□□□□ -0.88
BRAT1-203ENST00000467558 LINC00337Q8N6G1 96 aa9.55□□□□□ -0.88
BRAT1-203ENST00000467558 Q6ZRU5 148 aa9.55□□□□□ -0.88
BRAT1-203ENST00000467558 SCXQ7RTU7 201 aa9.55□□□□□ -0.88
BRAT1-203ENST00000467558 C3orf84H3BNL1 204 aa9.55□□□□□ -0.88
BRAT1-203ENST00000467558 A0A087WYN8 130 aa9.55□□□□□ -0.88
BRAT1-203ENST00000467558 ASPMQ8IZT6 3477 aa9.54□□□□□ -0.88
BRAT1-203ENST00000467558 PPDPFQ9H3Y8 114 aa9.54□□□□□ -0.88
BRAT1-203ENST00000467558 ZNF706Q9Y5V0 76 aaPredicted RBP9.54□□□□□ -0.88
BRAT1-203ENST00000467558 CHD6Q8TD26 2715 aa9.54□□□□□ -0.88
BRAT1-203ENST00000467558 XGP55808 180 aa9.53□□□□□ -0.88
BRAT1-203ENST00000467558 CSNK1G2-AS1Q8NCQ2 148 aa9.53□□□□□ -0.88
BRAT1-203ENST00000467558 PLAC8L1A1L4L8 177 aa9.53□□□□□ -0.88
BRAT1-203ENST00000467558 SBSPONQ8IVN8 264 aa9.53□□□□□ -0.88
BRAT1-203ENST00000467558 SS18L2Q9UHA2 77 aa9.53□□□□□ -0.88
BRAT1-203ENST00000467558 LRCOL1A6NCL2 159 aa9.52□□□□□ -0.88
BRAT1-203ENST00000467558 UQCRQO14949 82 aa9.51□□□□□ -0.89
BRAT1-203ENST00000467558 LAMA5O15230 3695 aa9.51□□□□□ -0.89
BRAT1-203ENST00000467558 TMEM258P61165 79 aa9.51□□□□□ -0.89
BRAT1-203ENST00000467558 MAST4O15021 2626 aa9.51□□□□□ -0.89
BRAT1-203ENST00000467558 REG3GQ6UW15 175 aa9.5□□□□□ -0.89
BRAT1-203ENST00000467558 C19orf73Q9NVV2 129 aa9.49□□□□□ -0.89
BRAT1-203ENST00000467558 TEX15Q9BXT5 2789 aa9.49□□□□□ -0.89
BRAT1-203ENST00000467558 C20orf197Q8N268 126 aa9.49□□□□□ -0.89
BRAT1-203ENST00000467558 MRPL55Q7Z7F7 128 aaKnown RBP9.48□□□□□ -0.89
BRAT1-203ENST00000467558 KRTAP1-1Q07627 177 aa9.48□□□□□ -0.89
BRAT1-203ENST00000467558 LINC00575Q6W349 94 aa9.48□□□□□ -0.89
BRAT1-203ENST00000467558 Q6JHZ5 121 aa9.47□□□□□ -0.89
BRAT1-203ENST00000467558 DCHS1Q96JQ0 3298 aa9.47□□□□□ -0.89
BRAT1-203ENST00000467558 PRYO14603 147 aa9.47□□□□□ -0.89
BRAT1-203ENST00000467558 TEP1Q99973 2627 aaKnown RBP9.46□□□□□ -0.89
BRAT1-203ENST00000467558 GIG44P09565 113 aaPredicted RBP9.46□□□□□ -0.89
BRAT1-203ENST00000467558 SOSTDC1Q6X4U4 206 aa9.45□□□□□ -0.9
BRAT1-203ENST00000467558 C1orf137Q5JT78 98 aa9.45□□□□□ -0.9
BRAT1-203ENST00000467558 C6orf48Q9UBA6 75 aa9.45□□□□□ -0.9
BRAT1-203ENST00000467558 Q6Q795 121 aa9.44□□□□□ -0.9
BRAT1-203ENST00000467558 ITPR1Q14643 2758 aa9.44□□□□□ -0.9
BRAT1-203ENST00000467558 KRTAP10-3P60369 221 aa9.44□□□□□ -0.9
BRAT1-203ENST00000467558 Q8N3U1 123 aa9.44□□□□□ -0.9
BRAT1-203ENST00000467558 C1orf134Q5TEV5 83 aa9.43□□□□□ -0.9
BRAT1-203ENST00000467558 IGLV5-52A0A0A0MRZ9 124 aa9.43□□□□□ -0.9
BRAT1-203ENST00000467558 UNC79Q9P2D8 2635 aa9.43□□□□□ -0.9
BRAT1-203ENST00000467558 SERP2Q8N6R1 65 aa9.43□□□□□ -0.9
BRAT1-203ENST00000467558 C10orf25Q5T742 122 aa9.42□□□□□ -0.9
BRAT1-203ENST00000467558 C3orf22Q8N5N4 141 aa9.42□□□□□ -0.9
BRAT1-203ENST00000467558 IGLV9-49A0A0B4J1Y8 123 aa9.42□□□□□ -0.9
BRAT1-203ENST00000467558 J3KT08 172 aa9.41□□□□□ -0.9
BRAT1-203ENST00000467558 MDFIQ99750 246 aa9.41□□□□□ -0.9
BRAT1-203ENST00000467558 C22orf24Q9Y442 160 aa9.41□□□□□ -0.9
BRAT1-203ENST00000467558 IGKV4-1P06312 121 aa9.4□□□□□ -0.91
BRAT1-203ENST00000467558 RELNP78509 3460 aa9.4□□□□□ -0.91
BRAT1-203ENST00000467558 FAM19A3Q7Z5A8 133 aa9.39□□□□□ -0.91
BRAT1-203ENST00000467558 LITAFQ99732 161 aa9.38□□□□□ -0.91
BRAT1-203ENST00000467558 LINC00612Q8N6U2 182 aa9.38□□□□□ -0.91
BRAT1-203ENST00000467558 LINC00588Q9Y4M8 146 aa9.38□□□□□ -0.91
BRAT1-203ENST00000467558 SPINK6Q6UWN8 80 aa9.38□□□□□ -0.91
BRAT1-203ENST00000467558 HRCT1Q6UXD1 115 aa9.36□□□□□ -0.91
BRAT1-203ENST00000467558 WFDC13Q8IUB5 93 aa9.36□□□□□ -0.91
BRAT1-203ENST00000467558 ZANQ9Y493 2812 aa9.36□□□□□ -0.91
BRAT1-203ENST00000467558 CHKB-CPT1BH3BT56 60 aa9.36□□□□□ -0.91
BRAT1-203ENST00000467558 COX7CP15954 63 aa9.36□□□□□ -0.91
BRAT1-203ENST00000467558 SMCPP49901 116 aaPredicted RBP9.36□□□□□ -0.91
BRAT1-203ENST00000467558 GCN1Q92616 2671 aaKnown RBP9.36□□□□□ -0.91
BRAT1-203ENST00000467558 KRTAP10-11P60412 298 aa9.36□□□□□ -0.91
BRAT1-203ENST00000467558 PRO0461Q9UI25 63 aa9.36□□□□□ -0.91
BRAT1-203ENST00000467558 DNAH10OSP0CZ25 163 aa9.35□□□□□ -0.91
BRAT1-203ENST00000467558 Q9BRP9 147 aa9.35□□□□□ -0.91
BRAT1-203ENST00000467558 ZFHX4Q86UP3 3567 aa9.35□□□□□ -0.91
BRAT1-203ENST00000467558 GVQW2A0A096LPI5 108 aaPredicted RBP9.34□□□□□ -0.91
BRAT1-203ENST00000467558 LINC00167Q96N53 147 aa9.34□□□□□ -0.91
BRAT1-203ENST00000467558 LINC00846Q9NV44 126 aa9.34□□□□□ -0.91
BRAT1-203ENST00000467558 PRLHP81277 87 aa9.33□□□□□ -0.92
BRAT1-203ENST00000467558 UTP20O75691 2785 aaKnown RBP9.33□□□□□ -0.92
BRAT1-203ENST00000467558 TRBV7-6A0A0J9YX20 115 aa9.33□□□□□ -0.92
BRAT1-203ENST00000467558 FAM218AQ96MZ4 157 aa9.33□□□□□ -0.92
BRAT1-203ENST00000467558 NDUFC1O43677 76 aa9.32□□□□□ -0.92
BRAT1-203ENST00000467558 ZNF575Q86XF7 245 aa9.32□□□□□ -0.92
BRAT1-203ENST00000467558 FAM236DA0A1B0GTK5 79 aa9.32□□□□□ -0.92
BRAT1-203ENST00000467558 FAM236CP0DP71 79 aa9.32□□□□□ -0.92
BRAT1-203ENST00000467558 CRYBG3Q68DQ2 2970 aa9.32□□□□□ -0.92
BRAT1-203ENST00000467558 ITPR2Q14571 2701 aa9.32□□□□□ -0.92
BRAT1-203ENST00000467558 A0A087WVE0 104 aa9.32□□□□□ -0.92
BRAT1-203ENST00000467558 K7EIL1 84 aa9.32□□□□□ -0.92
BRAT1-203ENST00000467558 PRR34Q9NV39 138 aa9.31□□□□□ -0.92
BRAT1-203ENST00000467558 UBR5O95071 2799 aaPredicted RBP9.3□□□□□ -0.92
BRAT1-203ENST00000467558 SMCR5Q8TEV8 140 aa9.3□□□□□ -0.92
BRAT1-203ENST00000467558 NBDYA0A0U1RRE5 68 aa9.3□□□□□ -0.92
BRAT1-203ENST00000467558 Q6ZVQ6 151 aa9.3□□□□□ -0.92
BRAT1-203ENST00000467558 CDIP1Q9H305 208 aa9.3□□□□□ -0.92
BRAT1-203ENST00000467558 ASH1LQ9NR48 2969 aaKnown RBP9.3□□□□□ -0.92
BRAT1-203ENST00000467558 HRNRQ86YZ3 2850 aaPredicted RBP9.29□□□□□ -0.92
BRAT1-203ENST00000467558 SETXQ7Z333 2677 aaKnown RBP9.29□□□□□ -0.92
BRAT1-203ENST00000467558 A0A087WSZ3 146 aa9.29□□□□□ -0.92
BRAT1-203ENST00000467558 ELOF1P60002 83 aaKnown RBP9.29□□□□□ -0.92
BRAT1-203ENST00000467558 CCDC179H3BU77 68 aa9.28□□□□□ -0.92
BRAT1-203ENST00000467558 TRAV7A0A075B6U4 112 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms