RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 IGLV4-3A0A075B6K6 122 aa4.92□□□□□ -1.62
APP-213ENST00000464867 LINC00862A6NCI5 91 aa4.92□□□□□ -1.62
APP-213ENST00000464867 RAB5AP20339 215 aa4.92□□□□□ -1.62
APP-213ENST00000464867 SEC11AP67812 179 aa4.92□□□□□ -1.62
APP-213ENST00000464867 GAGE2AQ6NT46 116 aa4.92□□□□□ -1.62
APP-213ENST00000464867 TIMM17AQ99595 171 aa4.92□□□□□ -1.62
APP-213ENST00000464867 TRBV24-1A0A075B6N3 115 aa4.91□□□□□ -1.62
APP-213ENST00000464867 HIGD1CA8MV81 97 aa4.91□□□□□ -1.62
APP-213ENST00000464867 K7EN84 100 aa4.91□□□□□ -1.62
APP-213ENST00000464867 CKS2P33552 79 aa4.91□□□□□ -1.62
APP-213ENST00000464867 SNRPEP62304 92 aaKnown RBP4.91□□□□□ -1.62
APP-213ENST00000464867 RIGQ13278 110 aa4.91□□□□□ -1.62
APP-213ENST00000464867 UBE2V1Q13404 147 aa4.91□□□□□ -1.62
APP-213ENST00000464867 KRTAP19-6Q3LI70 58 aa4.91□□□□□ -1.62
APP-213ENST00000464867 LINC00483Q53H64 154 aa4.91□□□□□ -1.62
APP-213ENST00000464867 SMCR5Q8TEV8 140 aa4.91□□□□□ -1.62
APP-213ENST00000464867 S100ZQ8WXG8 99 aa4.91□□□□□ -1.62
APP-213ENST00000464867 LIMD2Q9BT23 127 aa4.91□□□□□ -1.62
APP-213ENST00000464867 SMIM2Q9BVW6 85 aa4.91□□□□□ -1.62
APP-213ENST00000464867 VCX2Q9H322 139 aa4.91□□□□□ -1.62
APP-213ENST00000464867 RPL37P61927 97 aaKnown RBP4.9□□□□□ -1.63
APP-213ENST00000464867 HERVK_113P63121 156 aa4.9□□□□□ -1.63
APP-213ENST00000464867 GIPP09681 153 aaPredicted RBP4.89□□□□□ -1.63
APP-213ENST00000464867 RAB14P61106 215 aa4.89□□□□□ -1.63
APP-213ENST00000464867 MRPL51Q4U2R6 128 aaKnown RBP4.89□□□□□ -1.63
APP-213ENST00000464867 C9orf153Q5TBE3 101 aa4.89□□□□□ -1.63
APP-213ENST00000464867 COX7B2Q8TF08 81 aa4.89□□□□□ -1.63
APP-213ENST00000464867 ARPC5O15511 151 aa4.88□□□□□ -1.63
APP-213ENST00000464867 MT2AP02795 61 aa4.88□□□□□ -1.63
APP-213ENST00000464867 CDKN2A-AS1Q9UH64 79 aa4.88□□□□□ -1.63
APP-213ENST00000464867 ATP5LO75964 103 aa4.87□□□□□ -1.63
APP-213ENST00000464867 PFN2P35080 140 aa4.87□□□□□ -1.63
APP-213ENST00000464867 KRTAP10-10P60014 251 aa4.87□□□□□ -1.63
APP-213ENST00000464867 FAM104BQ5XKR9 115 aa4.87□□□□□ -1.63
APP-213ENST00000464867 C20orf202A1L168 122 aa4.86□□□□□ -1.63
APP-213ENST00000464867 PDZD11Q5EBL8 140 aa4.86□□□□□ -1.63
APP-213ENST00000464867 ZC2HC1BQ5TFG8 222 aa4.86□□□□□ -1.63
APP-213ENST00000464867 C2orf66Q6UXQ4 117 aa4.86□□□□□ -1.63
APP-213ENST00000464867 LINC00299Q6ZSB3 139 aa4.86□□□□□ -1.63
APP-213ENST00000464867 FAM19A3Q7Z5A8 133 aa4.86□□□□□ -1.63
APP-213ENST00000464867 ETDCA0A1B0GVM5 59 aa4.85□□□□□ -1.63
APP-213ENST00000464867 TAGLN2P37802 199 aaKnown RBP4.85□□□□□ -1.63
APP-213ENST00000464867 AMELXQ99217 191 aa4.85□□□□□ -1.63
APP-213ENST00000464867 SND1-IT1Q9HBX3 110 aa4.85□□□□□ -1.63
APP-213ENST00000464867 MT3P25713 68 aa4.84□□□□□ -1.63
APP-213ENST00000464867 IFITM3Q01628 133 aa4.84□□□□□ -1.63
APP-213ENST00000464867 CYSLTR1Q9Y271 337 aa4.84□□□□□ -1.63
APP-213ENST00000464867 LOC389332A0A1B0GUA5 103 aa4.83□□□□□ -1.64
APP-213ENST00000464867 SMIM1B2RUZ4 78 aa4.83□□□□□ -1.64
APP-213ENST00000464867 D6R8Y8 96 aa4.83□□□□□ -1.64
APP-213ENST00000464867 MT1FP04733 61 aa4.83□□□□□ -1.64
APP-213ENST00000464867 PET117Q6UWS5 81 aa4.83□□□□□ -1.64
APP-213ENST00000464867 NPYP01303 97 aa4.82□□□□□ -1.64
APP-213ENST00000464867 PPBPP02775 128 aa4.82□□□□□ -1.64
APP-213ENST00000464867 S100A12P80511 92 aa4.82□□□□□ -1.64
APP-213ENST00000464867 KANTRA0A1W2PQU2 76 aa4.81□□□□□ -1.64
APP-213ENST00000464867 COX17Q14061 63 aa4.81□□□□□ -1.64
APP-213ENST00000464867 HRCT1Q6UXD1 115 aa4.81□□□□□ -1.64
APP-213ENST00000464867 Q75L30 129 aa4.81□□□□□ -1.64
APP-213ENST00000464867 NAT8BQ9UHF3 227 aa4.81□□□□□ -1.64
APP-213ENST00000464867 A0A1B0GW15 77 aa4.8□□□□□ -1.64
APP-213ENST00000464867 F8W036 122 aa4.8□□□□□ -1.64
APP-213ENST00000464867 LGALS3P17931 250 aaKnown RBP4.8□□□□□ -1.64
APP-213ENST00000464867 ZNF345Q14585 488 aa4.8□□□□□ -1.64
APP-213ENST00000464867 ATP11AUNQ6ZP68 121 aa4.8□□□□□ -1.64
APP-213ENST00000464867 ERG28Q9UKR5 140 aa4.8□□□□□ -1.64
APP-213ENST00000464867 TRAV9-1A0A075B6T8 112 aa4.79□□□□□ -1.64
APP-213ENST00000464867 S100A8P05109 93 aa4.79□□□□□ -1.64
APP-213ENST00000464867 OSTCQ9NRP0 149 aa4.79□□□□□ -1.64
APP-213ENST00000464867 TRBV20-1A0A075B6N2 111 aa4.78□□□□□ -1.64
APP-213ENST00000464867 SPINK8P0C7L1 97 aa4.78□□□□□ -1.64
APP-213ENST00000464867 SPRR1AP35321 89 aa4.78□□□□□ -1.64
APP-213ENST00000464867 CEBPGP53567 150 aa4.78□□□□□ -1.64
APP-213ENST00000464867 ORMDL3Q8N138 153 aa4.78□□□□□ -1.64
APP-213ENST00000464867 Q8NDZ9 215 aa4.78□□□□□ -1.64
APP-213ENST00000464867 KCNQ1DNQ9H478 68 aa4.78□□□□□ -1.64
APP-213ENST00000464867 NDUFA13Q9P0J0 144 aa4.78□□□□□ -1.64
APP-213ENST00000464867 TINCRA0A1B0GVN0 87 aa4.77□□□□□ -1.65
APP-213ENST00000464867 IGIPA6NJ69 53 aa4.77□□□□□ -1.65
APP-213ENST00000464867 HMSDA8MTL9 139 aa4.77□□□□□ -1.65
APP-213ENST00000464867 TMEM250H0YL14 139 aa4.77□□□□□ -1.65
APP-213ENST00000464867 ORMDL2Q53FV1 153 aa4.77□□□□□ -1.65
APP-213ENST00000464867 MUC12Q9UKN1 5478 aa4.76□□□□□ -1.65
APP-213ENST00000464867 H3BRM9 83 aa4.76□□□□□ -1.65
APP-213ENST00000464867 ERC2-IT1O76042 136 aa4.76□□□□□ -1.65
APP-213ENST00000464867 G0S2P27469 103 aa4.76□□□□□ -1.65
APP-213ENST00000464867 KIAA1644Q3SXP7 199 aa4.76□□□□□ -1.65
APP-213ENST00000464867 TMEM136Q6ZRR5 245 aa4.76□□□□□ -1.65
APP-213ENST00000464867 PRELID3AQ96N28 172 aa4.76□□□□□ -1.65
APP-213ENST00000464867 FAM74A3Q4VXF1 159 aa4.75□□□□□ -1.65
APP-213ENST00000464867 MAP1LC3AQ9H492 121 aa4.75□□□□□ -1.65
APP-213ENST00000464867 V9GYV3 84 aa4.75□□□□□ -1.65
APP-213ENST00000464867 IGLV5-45A0A087WSX0 123 aa4.74□□□□□ -1.65
APP-213ENST00000464867 ZNF625Q96I27 306 aaPredicted RBP4.74□□□□□ -1.65
APP-213ENST00000464867 K7EMI3 77 aa4.73□□□□□ -1.65
APP-213ENST00000464867 SLC25A34Q6PIV7 304 aa4.73□□□□□ -1.65
APP-213ENST00000464867 Q8N8P6 123 aa4.73□□□□□ -1.65
APP-213ENST00000464867 SMIM7Q9BQ49 75 aa4.73□□□□□ -1.65
APP-213ENST00000464867 NCR3O14931 201 aa4.72□□□□□ -1.65
APP-213ENST00000464867 ATP6V1G1O75348 118 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms