RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 FA2HQ7L5A8 372 aa8.31□□□□□ -1.08
MCF2L-220ENST00000464800 PLEKHB2Q96CS7 222 aa8.31□□□□□ -1.08
MCF2L-220ENST00000464800 IGLV5-39A0A0G2JS06 123 aa8.3□□□□□ -1.08
MCF2L-220ENST00000464800 VPREB1P12018 145 aa8.3□□□□□ -1.08
MCF2L-220ENST00000464800 KRTAP13-3Q3SY46 172 aa8.3□□□□□ -1.08
MCF2L-220ENST00000464800 CBLN2Q8IUK8 224 aa8.3□□□□□ -1.08
MCF2L-220ENST00000464800 SND1-IT1Q9HBX3 110 aa8.3□□□□□ -1.08
MCF2L-220ENST00000464800 SMCO4Q9NRQ5 59 aa8.3□□□□□ -1.08
MCF2L-220ENST00000464800 M0R378 163 aa8.29□□□□□ -1.08
MCF2L-220ENST00000464800 IGLC3P0DOY3 106 aa8.29□□□□□ -1.08
MCF2L-220ENST00000464800 CRCT1Q9UGL9 99 aa8.29□□□□□ -1.08
MCF2L-220ENST00000464800 NDUFA6P56556 154 aa8.28□□□□□ -1.08
MCF2L-220ENST00000464800 RPL24P83731 157 aaKnown RBP8.28□□□□□ -1.08
MCF2L-220ENST00000464800 FABP9Q0Z7S8 132 aa8.28□□□□□ -1.08
MCF2L-220ENST00000464800 C4orf48Q5BLP8 95 aa8.28□□□□□ -1.08
MCF2L-220ENST00000464800 HIGD2AQ9BW72 106 aa8.28□□□□□ -1.08
MCF2L-220ENST00000464800 ERG28Q9UKR5 140 aa8.28□□□□□ -1.08
MCF2L-220ENST00000464800 ZNF22P17026 224 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-220ENST00000464800 COX19Q49B96 90 aa8.27□□□□□ -1.09
MCF2L-220ENST00000464800 SEC61BP60468 96 aaKnown RBP8.26□□□□□ -1.09
MCF2L-220ENST00000464800 COX17Q14061 63 aa8.26□□□□□ -1.09
MCF2L-220ENST00000464800 Q8NDZ9 215 aa8.26□□□□□ -1.09
MCF2L-220ENST00000464800 ZNF625Q96I27 306 aaPredicted RBP8.26□□□□□ -1.09
MCF2L-220ENST00000464800 A0A096LNJ9 63 aa8.25□□□□□ -1.09
MCF2L-220ENST00000464800 SPRR4Q96PI1 79 aa8.25□□□□□ -1.09
MCF2L-220ENST00000464800 KRTAP4-1Q9BYQ7 146 aa8.25□□□□□ -1.09
MCF2L-220ENST00000464800 YPEL4Q96NS1 127 aa8.24□□□□□ -1.09
MCF2L-220ENST00000464800 ZNF706Q9Y5V0 76 aaPredicted RBP8.24□□□□□ -1.09
MCF2L-220ENST00000464800 Q8NBF4 154 aa8.23□□□□□ -1.09
MCF2L-220ENST00000464800 URB1-AS1Q96HZ7 61 aa8.23□□□□□ -1.09
MCF2L-220ENST00000464800 C11orf86A6NJI1 115 aa8.22□□□□□ -1.09
MCF2L-220ENST00000464800 LINC00614P0C842 121 aa8.22□□□□□ -1.09
MCF2L-220ENST00000464800 DAND5Q8N907 189 aa8.22□□□□□ -1.09
MCF2L-220ENST00000464800 HBDP02042 147 aa8.21□□□□□ -1.1
MCF2L-220ENST00000464800 PMCHL1Q16048 86 aa8.21□□□□□ -1.1
MCF2L-220ENST00000464800 TMEM170BQ5T4T1 132 aa8.21□□□□□ -1.1
MCF2L-220ENST00000464800 SFTA2Q6UW10 78 aa8.21□□□□□ -1.1
MCF2L-220ENST00000464800 BAGE3Q86Y29 109 aa8.21□□□□□ -1.1
MCF2L-220ENST00000464800 TRAPPC1Q9Y5R8 145 aa8.21□□□□□ -1.1
MCF2L-220ENST00000464800 SPINK1P00995 79 aa8.2□□□□□ -1.1
MCF2L-220ENST00000464800 C18orf32Q8TCD1 76 aa8.2□□□□□ -1.1
MCF2L-220ENST00000464800 NDUFA12Q9UI09 145 aa8.2□□□□□ -1.1
MCF2L-220ENST00000464800 COLCA2A8K830 154 aa8.19□□□□□ -1.1
MCF2L-220ENST00000464800 LINC00158P58513 81 aa8.19□□□□□ -1.1
MCF2L-220ENST00000464800 A0A0U1RRA0 63 aa8.18□□□□□ -1.1
MCF2L-220ENST00000464800 FSIP2Q5CZC0 6907 aa8.17□□□□□ -1.1
MCF2L-220ENST00000464800 FAM19A2Q8N3H0 131 aa8.17□□□□□ -1.1
MCF2L-220ENST00000464800 CHTOPQ9Y3Y2 248 aaKnown RBP8.16□□□□□ -1.1
MCF2L-220ENST00000464800 PRYO14603 147 aa8.15□□□□□ -1.1
MCF2L-220ENST00000464800 TMEM223A0PJW6 202 aa8.14□□□□□ -1.11
MCF2L-220ENST00000464800 TRGC2P03986 189 aa8.13□□□□□ -1.11
MCF2L-220ENST00000464800 SMIM13P0DJ93 91 aa8.13□□□□□ -1.11
MCF2L-220ENST00000464800 RPS29P62273 56 aaKnown RBP8.13□□□□□ -1.11
MCF2L-220ENST00000464800 XP32Q5T750 250 aa8.13□□□□□ -1.11
MCF2L-220ENST00000464800 BOD1L2Q8IYS8 172 aa8.13□□□□□ -1.11
MCF2L-220ENST00000464800 Q8N377 158 aa8.13□□□□□ -1.11
MCF2L-220ENST00000464800 LINC00483Q53H64 154 aa8.12□□□□□ -1.11
MCF2L-220ENST00000464800 SMCR5Q8TEV8 140 aa8.12□□□□□ -1.11
MCF2L-220ENST00000464800 KCNQ1DNQ9H478 68 aa8.12□□□□□ -1.11
MCF2L-220ENST00000464800 NCR3O14931 201 aa8.11□□□□□ -1.11
MCF2L-220ENST00000464800 SPRR1AP35321 89 aa8.11□□□□□ -1.11
MCF2L-220ENST00000464800 MOBPQ13875 183 aa8.11□□□□□ -1.11
MCF2L-220ENST00000464800 LCE2CQ5TA81 110 aa8.11□□□□□ -1.11
MCF2L-220ENST00000464800 IGLV9-49A0A0B4J1Y8 123 aa8.1□□□□□ -1.11
MCF2L-220ENST00000464800 TRAV12-1A0A0B4J245 112 aa8.1□□□□□ -1.11
MCF2L-220ENST00000464800 ETDCA0A1B0GVM5 59 aa8.1□□□□□ -1.11
MCF2L-220ENST00000464800 SLC25A20O43772 301 aa8.1□□□□□ -1.11
MCF2L-220ENST00000464800 MEIG1Q5JSS6 88 aa8.1□□□□□ -1.11
MCF2L-220ENST00000464800 MIR7-3HGQ8N6C7 128 aa8.1□□□□□ -1.11
MCF2L-220ENST00000464800 KRTAP4-16G5E9R7 235 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-220ENST00000464800 GAGE2AQ6NT46 116 aa8.09□□□□□ -1.11
MCF2L-220ENST00000464800 IFI27L1Q96BM0 104 aa8.09□□□□□ -1.11
MCF2L-220ENST00000464800 HERV-K104P63124 156 aa8.08□□□□□ -1.12
MCF2L-220ENST00000464800 TRBV10-3A0A0K0K1G6 114 aa8.07□□□□□ -1.12
MCF2L-220ENST00000464800 CFC1BP0CG36 223 aa8.07□□□□□ -1.12
MCF2L-220ENST00000464800 SSBP3-AS1Q7Z2R9 100 aa8.07□□□□□ -1.12
MCF2L-220ENST00000464800 CHCHD1Q96BP2 118 aaKnown RBP8.07□□□□□ -1.12
MCF2L-220ENST00000464800 LINC00587B1AMM8 73 aa8.06□□□□□ -1.12
MCF2L-220ENST00000464800 MT1HP80294 61 aa8.06□□□□□ -1.12
MCF2L-220ENST00000464800 S100A12P80511 92 aa8.05□□□□□ -1.12
MCF2L-220ENST00000464800 KRTAP19-2Q3LHN2 52 aa8.05□□□□□ -1.12
MCF2L-220ENST00000464800 MYMXA0A1B0GTQ4 84 aa8.04□□□□□ -1.12
MCF2L-220ENST00000464800 B5MCH6 92 aa8.04□□□□□ -1.12
MCF2L-220ENST00000464800 HIST1H2BKO60814 126 aa8.04□□□□□ -1.12
MCF2L-220ENST00000464800 HIST1H2BJP06899 126 aa8.04□□□□□ -1.12
MCF2L-220ENST00000464800 HIST1H2BOP23527 126 aa8.04□□□□□ -1.12
MCF2L-220ENST00000464800 HIST1H2BBP33778 126 aa8.04□□□□□ -1.12
MCF2L-220ENST00000464800 HIST1H2BDP58876 126 aa8.04□□□□□ -1.12
MCF2L-220ENST00000464800 HIST1H2BCP62807 126 aa8.04□□□□□ -1.12
MCF2L-220ENST00000464800 HIST2H2BEQ16778 126 aa8.04□□□□□ -1.12
MCF2L-220ENST00000464800 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.04□□□□□ -1.12
MCF2L-220ENST00000464800 HIST1H2BHQ93079 126 aa8.04□□□□□ -1.12
MCF2L-220ENST00000464800 HIST1H2BNQ99877 126 aa8.04□□□□□ -1.12
MCF2L-220ENST00000464800 HIST1H2BMQ99879 126 aa8.04□□□□□ -1.12
MCF2L-220ENST00000464800 MAP1LC3CQ9BXW4 147 aa8.04□□□□□ -1.12
MCF2L-220ENST00000464800 ERC2-IT1O76042 136 aa8.03□□□□□ -1.12
MCF2L-220ENST00000464800 LOC107984156A0A0G2JMH3 177 aa8.01□□□□□ -1.13
MCF2L-220ENST00000464800 HSBP1O75506 76 aa8.01□□□□□ -1.13
MCF2L-220ENST00000464800 DDTP30046 118 aa8.01□□□□□ -1.13
MCF2L-220ENST00000464800 ARL17AQ8IVW1 177 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms