RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 C22orf24Q9Y442 160 aa12.63□□□□□ -0.39
NUP43-205ENST00000463048 ZNF815PA8K554 130 aa12.62□□□□□ -0.39
NUP43-205ENST00000463048 A0A0J9YXY3 114 aa12.61□□□□□ -0.39
NUP43-205ENST00000463048 AKR1D1P51857 326 aa12.61□□□□□ -0.39
NUP43-205ENST00000463048 UBE2BP63146 152 aa12.61□□□□□ -0.39
NUP43-205ENST00000463048 VPS13BQ7Z7G8 4022 aa12.6□□□□□ -0.39
NUP43-205ENST00000463048 GAGE10A6NGK3 116 aa12.6□□□□□ -0.39
NUP43-205ENST00000463048 LINC00587B1AMM8 73 aa12.6□□□□□ -0.39
NUP43-205ENST00000463048 KRTAP10-4P60372 401 aaPredicted RBP12.6□□□□□ -0.39
NUP43-205ENST00000463048 KRTAP11-1Q8IUC1 163 aa12.6□□□□□ -0.39
NUP43-205ENST00000463048 SRRM2Q9UQ35 2752 aaKnown RBP12.59□□□□□ -0.39
NUP43-205ENST00000463048 NKAPP1Q8N9T2 125 aa12.59□□□□□ -0.39
NUP43-205ENST00000463048 HSBP1L1C9JCN9 74 aa12.58□□□□□ -0.4
NUP43-205ENST00000463048 INAFM2P0DMQ5 153 aa12.58□□□□□ -0.4
NUP43-205ENST00000463048 NPC2P61916 151 aa12.58□□□□□ -0.4
NUP43-205ENST00000463048 PRR3P79522 188 aaKnown RBP12.58□□□□□ -0.4
NUP43-205ENST00000463048 Q8NDZ9 215 aa12.58□□□□□ -0.4
NUP43-205ENST00000463048 MRPL55Q7Z7F7 128 aaKnown RBP12.57□□□□□ -0.4
NUP43-205ENST00000463048 PCP2Q8IVA1 136 aa12.57□□□□□ -0.4
NUP43-205ENST00000463048 PSORS1C2Q9UIG4 136 aa12.57□□□□□ -0.4
NUP43-205ENST00000463048 PLA2G2DQ9UNK4 145 aa12.57□□□□□ -0.4
NUP43-205ENST00000463048 RPL37AP8A6NKH3 93 aa12.56□□□□□ -0.4
NUP43-205ENST00000463048 ADAMTSL4-AS1Q5T5F5 129 aa12.56□□□□□ -0.4
NUP43-205ENST00000463048 BOD1L2Q8IYS8 172 aa12.56□□□□□ -0.4
NUP43-205ENST00000463048 VPREB1P12018 145 aa12.55□□□□□ -0.4
NUP43-205ENST00000463048 HNRNPA3P51991 378 aaKnown RBP12.55□□□□□ -0.4
NUP43-205ENST00000463048 LBHQ53QV2 105 aaPredicted RBP12.55□□□□□ -0.4
NUP43-205ENST00000463048 LINC00167Q96N53 147 aa12.55□□□□□ -0.4
NUP43-205ENST00000463048 ABCA13Q86UQ4 5058 aa12.54□□□□□ -0.4
NUP43-205ENST00000463048 RPL24P83731 157 aaKnown RBP12.54□□□□□ -0.4
NUP43-205ENST00000463048 C1orf137Q5JT78 98 aa12.54□□□□□ -0.4
NUP43-205ENST00000463048 SCGB1D4Q6XE38 83 aa12.53□□□□□ -0.4
NUP43-205ENST00000463048 IGLV5-37A0A075B6J1 123 aa12.52□□□□□ -0.41
NUP43-205ENST00000463048 NCR3O14931 201 aa12.52□□□□□ -0.41
NUP43-205ENST00000463048 TP73-AS1Q9UF72 201 aa12.52□□□□□ -0.41
NUP43-205ENST00000463048 MIEN1Q9BRT3 115 aa12.51□□□□□ -0.41
NUP43-205ENST00000463048 IGKV2-28A0A075B6P5 120 aa12.5□□□□□ -0.41
NUP43-205ENST00000463048 IGKV2D-28P01615 120 aa12.5□□□□□ -0.41
NUP43-205ENST00000463048 LITAFQ99732 161 aa12.5□□□□□ -0.41
NUP43-205ENST00000463048 EIF4EBP3O60516 100 aaPredicted RBP12.49□□□□□ -0.41
NUP43-205ENST00000463048 JOSD1Q15040 202 aaPredicted RBP12.49□□□□□ -0.41
NUP43-205ENST00000463048 SOSTDC1Q6X4U4 206 aa12.49□□□□□ -0.41
NUP43-205ENST00000463048 TIMM17BO60830 172 aa12.47□□□□□ -0.41
NUP43-205ENST00000463048 PAM16Q9Y3D7 125 aa12.47□□□□□ -0.41
NUP43-205ENST00000463048 M0R378 163 aa12.45□□□□□ -0.42
NUP43-205ENST00000463048 SPATA45Q537H7 98 aa12.44□□□□□ -0.42
NUP43-205ENST00000463048 LINC00308Q8TCZ7 52 aa12.44□□□□□ -0.42
NUP43-205ENST00000463048 VAMP8Q9BV40 100 aa12.44□□□□□ -0.42
NUP43-205ENST00000463048 TMEM238C9JI98 176 aa12.43□□□□□ -0.42
NUP43-205ENST00000463048 IGLV7-43P04211 117 aa12.43□□□□□ -0.42
NUP43-205ENST00000463048 PYY3Q5JQD4 70 aa12.43□□□□□ -0.42
NUP43-205ENST00000463048 PKHD1L1Q86WI1 4243 aa12.42□□□□□ -0.42
NUP43-205ENST00000463048 IGLV1-50A0A075B6I6 118 aa12.42□□□□□ -0.42
NUP43-205ENST00000463048 LOC107984156A0A0G2JMH3 177 aa12.42□□□□□ -0.42
NUP43-205ENST00000463048 ARL17AQ8IVW1 177 aa12.42□□□□□ -0.42
NUP43-205ENST00000463048 PCLOQ9Y6V0 5065 aa12.42□□□□□ -0.42
NUP43-205ENST00000463048 C14orf144Q96I85 54 aa12.41□□□□□ -0.42
NUP43-205ENST00000463048 SPANXDQ9BXN6 97 aa12.4□□□□□ -0.42
NUP43-205ENST00000463048 SPANXCQ9NY87 97 aa12.4□□□□□ -0.42
NUP43-205ENST00000463048 FLG2Q5D862 2391 aaPredicted RBP12.4□□□□□ -0.43
NUP43-205ENST00000463048 TRBV10-3A0A0K0K1G6 114 aa12.38□□□□□ -0.43
NUP43-205ENST00000463048 COX8AP10176 69 aa12.38□□□□□ -0.43
NUP43-205ENST00000463048 SPANXB1Q9NS25 103 aaPredicted RBP12.38□□□□□ -0.43
NUP43-205ENST00000463048 BCE1O60756 84 aa12.37□□□□□ -0.43
NUP43-205ENST00000463048 SRSF9Q13242 221 aaKnown RBP eCLIP12.37□□□□□ -0.43
NUP43-205ENST00000463048 REG3GQ6UW15 175 aa12.37□□□□□ -0.43
NUP43-205ENST00000463048 SPINK6Q6UWN8 80 aa12.37□□□□□ -0.43
NUP43-205ENST00000463048 NDUFC2O95298 119 aa12.36□□□□□ -0.43
NUP43-205ENST00000463048 S100A7L2Q5SY68 101 aa12.36□□□□□ -0.43
NUP43-205ENST00000463048 MUSTN1Q8IVN3 82 aa12.36□□□□□ -0.43
NUP43-205ENST00000463048 TMEM126AQ9H061 195 aa12.36□□□□□ -0.43
NUP43-205ENST00000463048 DDTP30046 118 aa12.35□□□□□ -0.43
NUP43-205ENST00000463048 TRBV10-2A0A0K0K1G8 114 aa12.34□□□□□ -0.43
NUP43-205ENST00000463048 UBE2AP49459 152 aa12.34□□□□□ -0.43
NUP43-205ENST00000463048 FAM19A1Q7Z5A9 133 aa12.34□□□□□ -0.43
NUP43-205ENST00000463048 PRLHP81277 87 aa12.33□□□□□ -0.44
NUP43-205ENST00000463048 OR13C6PQ8NH95 151 aa12.33□□□□□ -0.44
NUP43-205ENST00000463048 IFITM1P13164 125 aa12.32□□□□□ -0.44
NUP43-205ENST00000463048 ZNF861PO60384 105 aa12.31□□□□□ -0.44
NUP43-205ENST00000463048 Q6ZVH6 145 aa12.31□□□□□ -0.44
NUP43-205ENST00000463048 COPS9Q8WXC6 57 aa12.31□□□□□ -0.44
NUP43-205ENST00000463048 PRYO14603 147 aa12.3□□□□□ -0.44
NUP43-205ENST00000463048 RPL28P46779 137 aaKnown RBP12.3□□□□□ -0.44
NUP43-205ENST00000463048 SLC25A34Q6PIV7 304 aa12.3□□□□□ -0.44
NUP43-205ENST00000463048 DIRC1Q969H9 104 aa12.3□□□□□ -0.44
NUP43-205ENST00000463048 MYCBP2O75592 4640 aa12.3□□□□□ -0.44
NUP43-205ENST00000463048 DLEU1O43261 78 aa12.29□□□□□ -0.44
NUP43-205ENST00000463048 S100A12P80511 92 aa12.29□□□□□ -0.44
NUP43-205ENST00000463048 H0Y9J4 135 aa12.28□□□□□ -0.44
NUP43-205ENST00000463048 HIST1H4GQ99525 98 aa12.28□□□□□ -0.44
NUP43-205ENST00000463048 KCNQ1DNQ9H478 68 aa12.28□□□□□ -0.44
NUP43-205ENST00000463048 IGLV6-57P01721 117 aa12.27□□□□□ -0.45
NUP43-205ENST00000463048 LINC00337Q8N6G1 96 aa12.27□□□□□ -0.45
NUP43-205ENST00000463048 J3QL48 77 aa12.26□□□□□ -0.45
NUP43-205ENST00000463048 TRAV23DV6A0A075B6W5 121 aa12.25□□□□□ -0.45
NUP43-205ENST00000463048 ETDCA0A1B0GVM5 59 aa12.25□□□□□ -0.45
NUP43-205ENST00000463048 LINC00518Q8N0U6 118 aa12.25□□□□□ -0.45
NUP43-205ENST00000463048 LRP1Q07954 4544 aaKnown RBP12.25□□□□□ -0.45
NUP43-205ENST00000463048 C2orf91Q6ZV80 131 aa12.24□□□□□ -0.45
NUP43-205ENST00000463048 KRTAP13-1Q8IUC0 172 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms