RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 PMCHL2Q9BQD1 86 aa11.25□□□□□ -0.61
CDKN1A-206ENST00000462537 DPM2O94777 84 aa11.24□□□□□ -0.61
CDKN1A-206ENST00000462537 MAP1LC3CQ9BXW4 147 aa11.24□□□□□ -0.61
CDKN1A-206ENST00000462537 ATP6V1G1O75348 118 aa11.23□□□□□ -0.61
CDKN1A-206ENST00000462537 RPL24P83731 157 aaKnown RBP11.23□□□□□ -0.61
CDKN1A-206ENST00000462537 MEIG1Q5JSS6 88 aa11.23□□□□□ -0.61
CDKN1A-206ENST00000462537 KRTAP10-8P60410 259 aa11.22□□□□□ -0.61
CDKN1A-206ENST00000462537 NDUFA12Q9UI09 145 aa11.22□□□□□ -0.61
CDKN1A-206ENST00000462537 IGKV2-28A0A075B6P5 120 aa11.21□□□□□ -0.61
CDKN1A-206ENST00000462537 ZNF861PO60384 105 aa11.21□□□□□ -0.61
CDKN1A-206ENST00000462537 BCE1O60756 84 aa11.21□□□□□ -0.61
CDKN1A-206ENST00000462537 IGKV2D-28P01615 120 aa11.21□□□□□ -0.61
CDKN1A-206ENST00000462537 IGKCP01834 107 aa11.21□□□□□ -0.61
CDKN1A-206ENST00000462537 SMIM13P0DJ93 91 aa11.21□□□□□ -0.61
CDKN1A-206ENST00000462537 VPREB1P12018 145 aa11.21□□□□□ -0.61
CDKN1A-206ENST00000462537 HERVK_113P61574 105 aa11.21□□□□□ -0.61
CDKN1A-206ENST00000462537 HERV-K104P63124 156 aa11.21□□□□□ -0.61
CDKN1A-206ENST00000462537 MYMXA0A1B0GTQ4 84 aa11.2□□□□□ -0.62
CDKN1A-206ENST00000462537 LEPROTO15243 131 aa11.2□□□□□ -0.62
CDKN1A-206ENST00000462537 PLEKHB2Q96CS7 222 aa11.2□□□□□ -0.62
CDKN1A-206ENST00000462537 RPL28P46779 137 aaKnown RBP11.19□□□□□ -0.62
CDKN1A-206ENST00000462537 TNXBP22105 4242 aa11.18□□□□□ -0.62
CDKN1A-206ENST00000462537 TSPEAR-AS2P59090 65 aa11.18□□□□□ -0.62
CDKN1A-206ENST00000462537 LINC00587B1AMM8 73 aa11.17□□□□□ -0.62
CDKN1A-206ENST00000462537 J3QQQ9 107 aa11.16□□□□□ -0.62
CDKN1A-206ENST00000462537 UBE2AP49459 152 aa11.16□□□□□ -0.62
CDKN1A-206ENST00000462537 MIR7-3HGQ8N6C7 128 aa11.16□□□□□ -0.62
CDKN1A-206ENST00000462537 PRR26Q8N8Z3 221 aa11.16□□□□□ -0.62
CDKN1A-206ENST00000462537 Q8NDZ9 215 aa11.16□□□□□ -0.62
CDKN1A-206ENST00000462537 IGLV1-50A0A075B6I6 118 aa11.15□□□□□ -0.62
CDKN1A-206ENST00000462537 SYS1-DBNDD2H3BUS1 97 aa11.15□□□□□ -0.62
CDKN1A-206ENST00000462537 LGALS3P17931 250 aaKnown RBP11.15□□□□□ -0.62
CDKN1A-206ENST00000462537 BOD1L2Q8IYS8 172 aa11.14□□□□□ -0.63
CDKN1A-206ENST00000462537 KRTAP1-4P0C5Y4 121 aa11.13□□□□□ -0.63
CDKN1A-206ENST00000462537 NMUP48645 174 aa11.13□□□□□ -0.63
CDKN1A-206ENST00000462537 TMEM238C9JI98 176 aa11.12□□□□□ -0.63
CDKN1A-206ENST00000462537 TMEM126AQ9H061 195 aa11.12□□□□□ -0.63
CDKN1A-206ENST00000462537 FAM19A1Q7Z5A9 133 aa11.11□□□□□ -0.63
CDKN1A-206ENST00000462537 M0R378 163 aa11.1□□□□□ -0.63
CDKN1A-206ENST00000462537 NCR3O14931 201 aa11.1□□□□□ -0.63
CDKN1A-206ENST00000462537 PET117Q6UWS5 81 aa11.1□□□□□ -0.63
CDKN1A-206ENST00000462537 DAND5Q8N907 189 aa11.1□□□□□ -0.63
CDKN1A-206ENST00000462537 COA6Q5JTJ3 125 aaKnown RBP11.09□□□□□ -0.63
CDKN1A-206ENST00000462537 LINC01545Q5VT33 79 aa11.09□□□□□ -0.63
CDKN1A-206ENST00000462537 E9PLD3 99 aa11.08□□□□□ -0.64
CDKN1A-206ENST00000462537 RPL13AP40429 203 aaKnown RBP11.08□□□□□ -0.64
CDKN1A-206ENST00000462537 PRLHP81277 87 aa11.08□□□□□ -0.64
CDKN1A-206ENST00000462537 C3orf79P0CE67 100 aa11.07□□□□□ -0.64
CDKN1A-206ENST00000462537 S100A1P23297 94 aa11.07□□□□□ -0.64
CDKN1A-206ENST00000462537 KRTDAPP60985 99 aa11.07□□□□□ -0.64
CDKN1A-206ENST00000462537 KRTAP13-1Q8IUC0 172 aa11.07□□□□□ -0.64
CDKN1A-206ENST00000462537 MIEN1Q9BRT3 115 aa11.06□□□□□ -0.64
CDKN1A-206ENST00000462537 HMCN2Q8NDA2 5059 aa11.06□□□□□ -0.64
CDKN1A-206ENST00000462537 IGKV2D-26A0A0A0MRZ7 120 aa11.04□□□□□ -0.64
CDKN1A-206ENST00000462537 A0A0J9YXY3 114 aa11.03□□□□□ -0.64
CDKN1A-206ENST00000462537 PRYO14603 147 aa11.02□□□□□ -0.65
CDKN1A-206ENST00000462537 NPC2P61916 151 aa11.02□□□□□ -0.65
CDKN1A-206ENST00000462537 LOC107984156A0A0G2JMH3 177 aa11.01□□□□□ -0.65
CDKN1A-206ENST00000462537 C20orf202A1L168 122 aa11.01□□□□□ -0.65
CDKN1A-206ENST00000462537 ARL17AQ8IVW1 177 aa11.01□□□□□ -0.65
CDKN1A-206ENST00000462537 ANAPC11Q9NYG5 84 aa11.01□□□□□ -0.65
CDKN1A-206ENST00000462537 TRBV10-3A0A0K0K1G6 114 aa11□□□□□ -0.65
CDKN1A-206ENST00000462537 CRYGAP11844 174 aa11□□□□□ -0.65
CDKN1A-206ENST00000462537 S100A12P80511 92 aa11□□□□□ -0.65
CDKN1A-206ENST00000462537 HIGD2AQ9BW72 106 aa11□□□□□ -0.65
CDKN1A-206ENST00000462537 A0A087X002 238 aa10.99□□□□□ -0.65
CDKN1A-206ENST00000462537 KCNQ1DNQ9H478 68 aa10.99□□□□□ -0.65
CDKN1A-206ENST00000462537 ZNF815PA8K554 130 aa10.98□□□□□ -0.65
CDKN1A-206ENST00000462537 ADAMTSL4-AS1Q5T5F5 129 aa10.98□□□□□ -0.65
CDKN1A-206ENST00000462537 SPANXB1Q9NS25 103 aaPredicted RBP10.98□□□□□ -0.65
CDKN1A-206ENST00000462537 ETDCA0A1B0GVM5 59 aa10.97□□□□□ -0.65
CDKN1A-206ENST00000462537 DDTP30046 118 aa10.97□□□□□ -0.65
CDKN1A-206ENST00000462537 TYMSOSQ8TAI1 123 aa10.97□□□□□ -0.65
CDKN1A-206ENST00000462537 TRBV10-2A0A0K0K1G8 114 aa10.96□□□□□ -0.65
CDKN1A-206ENST00000462537 NDUFC2O95298 119 aa10.95□□□□□ -0.66
CDKN1A-206ENST00000462537 S100A7L2Q5SY68 101 aa10.95□□□□□ -0.66
CDKN1A-206ENST00000462537 SOSTDC1Q6X4U4 206 aa10.95□□□□□ -0.66
CDKN1A-206ENST00000462537 ATOH7Q8N100 152 aa10.95□□□□□ -0.66
CDKN1A-206ENST00000462537 LINC00337Q8N6G1 96 aa10.95□□□□□ -0.66
CDKN1A-206ENST00000462537 TTTY13Q9BZ97 58 aa10.95□□□□□ -0.66
CDKN1A-206ENST00000462537 S100A2P29034 98 aa10.94□□□□□ -0.66
CDKN1A-206ENST00000462537 FAM229BQ4G0N7 80 aa10.94□□□□□ -0.66
CDKN1A-206ENST00000462537 EIF4EBP3O60516 100 aaPredicted RBP10.93□□□□□ -0.66
CDKN1A-206ENST00000462537 TIMM17BO60830 172 aa10.93□□□□□ -0.66
CDKN1A-206ENST00000462537 SPRR1AP35321 89 aa10.93□□□□□ -0.66
CDKN1A-206ENST00000462537 LINC00308Q8TCZ7 52 aa10.92□□□□□ -0.66
CDKN1A-206ENST00000462537 LITAFQ99732 161 aa10.92□□□□□ -0.66
CDKN1A-206ENST00000462537 S100A6P06703 90 aa10.91□□□□□ -0.66
CDKN1A-206ENST00000462537 AKR1D1P51857 326 aa10.91□□□□□ -0.66
CDKN1A-206ENST00000462537 KRTAP13-2Q52LG2 175 aa10.91□□□□□ -0.66
CDKN1A-206ENST00000462537 HIST3H2BBQ8N257 126 aa10.91□□□□□ -0.66
CDKN1A-206ENST00000462537 KRTAP4-16G5E9R7 235 aaPredicted RBP10.9□□□□□ -0.66
CDKN1A-206ENST00000462537 ANKRD39Q53RE8 183 aa10.9□□□□□ -0.66
CDKN1A-206ENST00000462537 SCGB1D4Q6XE38 83 aa10.9□□□□□ -0.66
CDKN1A-206ENST00000462537 ZNF706Q9Y5V0 76 aaPredicted RBP10.9□□□□□ -0.66
CDKN1A-206ENST00000462537 TSPAN13O95857 204 aa10.89□□□□□ -0.67
CDKN1A-206ENST00000462537 IGLV6-57P01721 117 aa10.89□□□□□ -0.67
CDKN1A-206ENST00000462537 HIST1H2BLQ99880 126 aa10.89□□□□□ -0.67
CDKN1A-206ENST00000462537 TRAV23DV6A0A075B6W5 121 aa10.88□□□□□ -0.67
CDKN1A-206ENST00000462537 SMCR5Q8TEV8 140 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms