RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 RPL13AP40429 203 aaKnown RBP5.53□□□□□ -1.52
DDX39B-216ENST00000462421 HERV-K104P63124 156 aa5.53□□□□□ -1.52
DDX39B-216ENST00000462421 ODF1Q14990 250 aa5.53□□□□□ -1.52
DDX39B-216ENST00000462421 SLC7A5P1Q8MH63 180 aa5.53□□□□□ -1.52
DDX39B-216ENST00000462421 ZNF625Q96I27 306 aaPredicted RBP5.53□□□□□ -1.52
DDX39B-216ENST00000462421 MIEN1Q9BRT3 115 aa5.53□□□□□ -1.52
DDX39B-216ENST00000462421 MYCBP2O75592 4640 aa5.52□□□□□ -1.53
DDX39B-216ENST00000462421 A0A096LNJ9 63 aa5.52□□□□□ -1.53
DDX39B-216ENST00000462421 IGLV5-39A0A0G2JS06 123 aa5.52□□□□□ -1.53
DDX39B-216ENST00000462421 MYMXA0A1B0GTQ4 84 aa5.52□□□□□ -1.53
DDX39B-216ENST00000462421 GAGE10A6NGK3 116 aa5.52□□□□□ -1.53
DDX39B-216ENST00000462421 LGALS3P17931 250 aaKnown RBP5.52□□□□□ -1.53
DDX39B-216ENST00000462421 H0Y9J4 135 aa5.51□□□□□ -1.53
DDX39B-216ENST00000462421 SERF1AO75920 110 aa5.51□□□□□ -1.53
DDX39B-216ENST00000462421 FABP4P15090 132 aa5.51□□□□□ -1.53
DDX39B-216ENST00000462421 FAM19A2Q8N3H0 131 aa5.51□□□□□ -1.53
DDX39B-216ENST00000462421 PLEKHB2Q96CS7 222 aa5.51□□□□□ -1.53
DDX39B-216ENST00000462421 URB1-AS1Q96HZ7 61 aa5.51□□□□□ -1.53
DDX39B-216ENST00000462421 IGLV1-50A0A075B6I6 118 aa5.5□□□□□ -1.53
DDX39B-216ENST00000462421 RPL37AP8A6NKH3 93 aa5.5□□□□□ -1.53
DDX39B-216ENST00000462421 ZNF861PO60384 105 aa5.5□□□□□ -1.53
DDX39B-216ENST00000462421 BCE1O60756 84 aa5.5□□□□□ -1.53
DDX39B-216ENST00000462421 DPM2O94777 84 aa5.5□□□□□ -1.53
DDX39B-216ENST00000462421 TMEM223A0PJW6 202 aa5.49□□□□□ -1.53
DDX39B-216ENST00000462421 IGKCP01834 107 aa5.49□□□□□ -1.53
DDX39B-216ENST00000462421 SRSF9Q13242 221 aaKnown RBP eCLIP5.49□□□□□ -1.53
DDX39B-216ENST00000462421 LINC00167Q96N53 147 aa5.49□□□□□ -1.53
DDX39B-216ENST00000462421 YPEL4Q96NS1 127 aa5.49□□□□□ -1.53
DDX39B-216ENST00000462421 SND1-IT1Q9HBX3 110 aa5.49□□□□□ -1.53
DDX39B-216ENST00000462421 NDUFA12Q9UI09 145 aa5.49□□□□□ -1.53
DDX39B-216ENST00000462421 IGKV2-28A0A075B6P5 120 aa5.48□□□□□ -1.53
DDX39B-216ENST00000462421 A0A0U1RRA0 63 aa5.48□□□□□ -1.53
DDX39B-216ENST00000462421 C20orf202A1L168 122 aa5.48□□□□□ -1.53
DDX39B-216ENST00000462421 IGKV2D-28P01615 120 aa5.48□□□□□ -1.53
DDX39B-216ENST00000462421 NMUP48645 174 aa5.48□□□□□ -1.53
DDX39B-216ENST00000462421 FAM19A1Q7Z5A9 133 aa5.48□□□□□ -1.53
DDX39B-216ENST00000462421 IGLV5-37A0A075B6J1 123 aa5.47□□□□□ -1.53
DDX39B-216ENST00000462421 LEPROTO15243 131 aa5.47□□□□□ -1.53
DDX39B-216ENST00000462421 GHRHP01286 108 aa5.47□□□□□ -1.53
DDX39B-216ENST00000462421 CBY1Q9Y3M2 126 aa5.47□□□□□ -1.53
DDX39B-216ENST00000462421 AKR1D1P51857 326 aa5.46□□□□□ -1.54
DDX39B-216ENST00000462421 BOD1L2Q8IYS8 172 aa5.46□□□□□ -1.54
DDX39B-216ENST00000462421 COLCA2A8K830 154 aa5.45□□□□□ -1.54
DDX39B-216ENST00000462421 M0R378 163 aa5.45□□□□□ -1.54
DDX39B-216ENST00000462421 SMIM13P0DJ93 91 aa5.45□□□□□ -1.54
DDX39B-216ENST00000462421 CRYGAP11844 174 aa5.45□□□□□ -1.54
DDX39B-216ENST00000462421 ZNF706Q9Y5V0 76 aaPredicted RBP5.45□□□□□ -1.54
DDX39B-216ENST00000462421 IGKV2D-26A0A0A0MRZ7 120 aa5.44□□□□□ -1.54
DDX39B-216ENST00000462421 ETDCA0A1B0GVM5 59 aa5.44□□□□□ -1.54
DDX39B-216ENST00000462421 J3QQQ9 107 aa5.44□□□□□ -1.54
DDX39B-216ENST00000462421 S100A7L2Q5SY68 101 aa5.44□□□□□ -1.54
DDX39B-216ENST00000462421 MIR7-3HGQ8N6C7 128 aa5.44□□□□□ -1.54
DDX39B-216ENST00000462421 PRR26Q8N8Z3 221 aa5.44□□□□□ -1.54
DDX39B-216ENST00000462421 NCR3O14931 201 aa5.43□□□□□ -1.54
DDX39B-216ENST00000462421 MT1HL1P0DM35 61 aa5.43□□□□□ -1.54
DDX39B-216ENST00000462421 VPREB1P12018 145 aa5.43□□□□□ -1.54
DDX39B-216ENST00000462421 HINT1P49773 126 aaPredicted RBP5.43□□□□□ -1.54
DDX39B-216ENST00000462421 KRTAP7-1Q8IUC3 87 aa5.43□□□□□ -1.54
DDX39B-216ENST00000462421 COPS9Q8WXC6 57 aa5.43□□□□□ -1.54
DDX39B-216ENST00000462421 TMEM126AQ9H061 195 aa5.43□□□□□ -1.54
DDX39B-216ENST00000462421 PRYO14603 147 aa5.42□□□□□ -1.54
DDX39B-216ENST00000462421 PET117Q6UWS5 81 aa5.42□□□□□ -1.54
DDX39B-216ENST00000462421 TYMSOSQ8TAI1 123 aa5.42□□□□□ -1.54
DDX39B-216ENST00000462421 PMCHL2Q9BQD1 86 aa5.42□□□□□ -1.54
DDX39B-216ENST00000462421 HIGD2AQ9BW72 106 aa5.42□□□□□ -1.54
DDX39B-216ENST00000462421 PKHD1L1Q86WI1 4243 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 SYS1-DBNDD2H3BUS1 97 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 HIST1H2BKO60814 126 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 SCO1O75880 301 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 HIST1H2BJP06899 126 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 HIST1H2BOP23527 126 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 S100A2P29034 98 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 HIST1H2BBP33778 126 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 HIST1H2BDP58876 126 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 KRTDAPP60985 99 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 HIST1H2BCP62807 126 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 HIST2H2BEQ16778 126 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.41□□□□□ -1.54
DDX39B-216ENST00000462421 KRTAP11-1Q8IUC1 163 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 HIST1H2BHQ93079 126 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 HIST1H2BNQ99877 126 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 HIST1H2BMQ99879 126 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 FAT3Q8TDW7 4589 aa5.41□□□□□ -1.54
DDX39B-216ENST00000462421 TMEM238C9JI98 176 aa5.4□□□□□ -1.54
DDX39B-216ENST00000462421 KRTAP10-8P60410 259 aa5.4□□□□□ -1.54
DDX39B-216ENST00000462421 PRLHP81277 87 aa5.4□□□□□ -1.54
DDX39B-216ENST00000462421 SCGB1D4Q6XE38 83 aa5.4□□□□□ -1.54
DDX39B-216ENST00000462421 SPANXB1Q9NS25 103 aaPredicted RBP5.4□□□□□ -1.54
DDX39B-216ENST00000462421 LRP1Q07954 4544 aaKnown RBP5.39□□□□□ -1.55
DDX39B-216ENST00000462421 HSBP1L1C9JCN9 74 aa5.39□□□□□ -1.55
DDX39B-216ENST00000462421 E9PLD3 99 aa5.39□□□□□ -1.55
DDX39B-216ENST00000462421 S100A6P06703 90 aa5.39□□□□□ -1.55
DDX39B-216ENST00000462421 S100A1P23297 94 aa5.39□□□□□ -1.55
DDX39B-216ENST00000462421 DDTP30046 118 aa5.39□□□□□ -1.55
DDX39B-216ENST00000462421 JOSD1Q15040 202 aaPredicted RBP5.39□□□□□ -1.55
DDX39B-216ENST00000462421 FAM229BQ4G0N7 80 aa5.39□□□□□ -1.55
DDX39B-216ENST00000462421 TRBV10-2A0A0K0K1G8 114 aa5.38□□□□□ -1.55
DDX39B-216ENST00000462421 ZNF815PA8K554 130 aa5.38□□□□□ -1.55
DDX39B-216ENST00000462421 PRR4Q16378 134 aa5.38□□□□□ -1.55
DDX39B-216ENST00000462421 OR13C6PQ8NH95 151 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms