RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 FXYD2P54710 66 aa9.87□□□□□ -0.83
TMEM39A-203ENST00000461654 KRTAP10-2P60368 255 aa9.87□□□□□ -0.83
TMEM39A-203ENST00000461654 Q8N814 137 aa9.87□□□□□ -0.83
TMEM39A-203ENST00000461654 SNHG12Q9BXW3 62 aa9.87□□□□□ -0.83
TMEM39A-203ENST00000461654 PGPEP1Q9NXJ5 209 aa9.87□□□□□ -0.83
TMEM39A-203ENST00000461654 SLPIP03973 132 aa9.86□□□□□ -0.83
TMEM39A-203ENST00000461654 RYR1P21817 5038 aa9.86□□□□□ -0.83
TMEM39A-203ENST00000461654 PCLOQ9Y6V0 5065 aa9.85□□□□□ -0.83
TMEM39A-203ENST00000461654 LOC107984640A0A0U1RRK4 108 aa9.85□□□□□ -0.83
TMEM39A-203ENST00000461654 A4D1N5 150 aa9.85□□□□□ -0.83
TMEM39A-203ENST00000461654 SND1-IT1Q9HBX3 110 aa9.85□□□□□ -0.83
TMEM39A-203ENST00000461654 TLX1NBP0CAT3 122 aa9.84□□□□□ -0.83
TMEM39A-203ENST00000461654 RPL18AQ02543 176 aaKnown RBP9.84□□□□□ -0.83
TMEM39A-203ENST00000461654 NHP2Q9NX24 153 aaKnown RBP9.84□□□□□ -0.83
TMEM39A-203ENST00000461654 GAGE2EQ4V326 116 aa9.83□□□□□ -0.84
TMEM39A-203ENST00000461654 COL5A1-AS1Q5SY13 56 aa9.83□□□□□ -0.84
TMEM39A-203ENST00000461654 SOSTDC1Q6X4U4 206 aa9.83□□□□□ -0.84
TMEM39A-203ENST00000461654 RAB37Q96AX2 223 aa9.83□□□□□ -0.84
TMEM39A-203ENST00000461654 GAGE2DQ9UEU5 116 aa9.83□□□□□ -0.84
TMEM39A-203ENST00000461654 LOC107984156A0A0G2JMH3 177 aa9.82□□□□□ -0.84
TMEM39A-203ENST00000461654 ARL17AQ8IVW1 177 aa9.82□□□□□ -0.84
TMEM39A-203ENST00000461654 LBHQ53QV2 105 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-203ENST00000461654 XAGE1AQ9HD64 81 aa9.81□□□□□ -0.84
TMEM39A-203ENST00000461654 LRP1BQ9NZR2 4599 aa9.81□□□□□ -0.84
TMEM39A-203ENST00000461654 EIF4EBP3O60516 100 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-203ENST00000461654 GAGE2BQ13066 116 aa9.8□□□□□ -0.84
TMEM39A-203ENST00000461654 Q6ZRP5 223 aa9.8□□□□□ -0.84
TMEM39A-203ENST00000461654 C9orf163Q8N9P6 203 aa9.8□□□□□ -0.84
TMEM39A-203ENST00000461654 KRTAP4-5Q9BYR2 181 aa9.8□□□□□ -0.84
TMEM39A-203ENST00000461654 A0A0B4J2C4 111 aa9.79□□□□□ -0.84
TMEM39A-203ENST00000461654 NDUFC2O95298 119 aa9.79□□□□□ -0.84
TMEM39A-203ENST00000461654 CFC1BP0CG36 223 aa9.78□□□□□ -0.84
TMEM39A-203ENST00000461654 CFC1P0CG37 223 aa9.78□□□□□ -0.84
TMEM39A-203ENST00000461654 Q8N1X5 172 aa9.78□□□□□ -0.84
TMEM39A-203ENST00000461654 PRO1854Q9UHT4 67 aa9.78□□□□□ -0.84
TMEM39A-203ENST00000461654 IGLV5-52A0A0A0MRZ9 124 aa9.77□□□□□ -0.85
TMEM39A-203ENST00000461654 TRAV13-2A0A0B4J235 113 aa9.77□□□□□ -0.85
TMEM39A-203ENST00000461654 A0A1B0GWB2 263 aa9.77□□□□□ -0.85
TMEM39A-203ENST00000461654 K7ERJ3 54 aa9.77□□□□□ -0.85
TMEM39A-203ENST00000461654 HSPG2P98160 4391 aa9.77□□□□□ -0.85
TMEM39A-203ENST00000461654 LINC00474Q9P2X8 69 aa9.75□□□□□ -0.85
TMEM39A-203ENST00000461654 C9orf129Q5T035 196 aaKnown RBP9.74□□□□□ -0.85
TMEM39A-203ENST00000461654 OR13C6PQ8NH95 151 aa9.74□□□□□ -0.85
TMEM39A-203ENST00000461654 A0A096LNI7 61 aa9.73□□□□□ -0.85
TMEM39A-203ENST00000461654 IGKV2-24A0A0C4DH68 120 aa9.73□□□□□ -0.85
TMEM39A-203ENST00000461654 Q1RN00 199 aa9.73□□□□□ -0.85
TMEM39A-203ENST00000461654 NKAPP1Q8N9T2 125 aa9.73□□□□□ -0.85
TMEM39A-203ENST00000461654 DNAH5Q8TE73 4624 aa9.73□□□□□ -0.85
TMEM39A-203ENST00000461654 APOBP04114 4563 aaKnown RBP9.73□□□□□ -0.85
TMEM39A-203ENST00000461654 TRBV10-2A0A0K0K1G8 114 aa9.72□□□□□ -0.85
TMEM39A-203ENST00000461654 H7C2G1 150 aa9.72□□□□□ -0.85
TMEM39A-203ENST00000461654 NCR3O14931 201 aa9.72□□□□□ -0.85
TMEM39A-203ENST00000461654 FUSP35637 526 aaKnown RBP eCLIP9.72□□□□□ -0.85
TMEM39A-203ENST00000461654 RPL13AP40429 203 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-203ENST00000461654 S100A7L2Q5SY68 101 aa9.72□□□□□ -0.85
TMEM39A-203ENST00000461654 SDIM1Q6ZPB5 146 aa9.72□□□□□ -0.85
TMEM39A-203ENST00000461654 PLA2G2DQ9UNK4 145 aa9.72□□□□□ -0.85
TMEM39A-203ENST00000461654 ABCA13Q86UQ4 5058 aa9.72□□□□□ -0.85
TMEM39A-203ENST00000461654 IGKV2-28A0A075B6P5 120 aa9.71□□□□□ -0.86
TMEM39A-203ENST00000461654 TAX1BP3O14907 124 aa9.71□□□□□ -0.86
TMEM39A-203ENST00000461654 IGKV2D-28P01615 120 aa9.71□□□□□ -0.86
TMEM39A-203ENST00000461654 XGP55808 180 aa9.71□□□□□ -0.86
TMEM39A-203ENST00000461654 KRTAP10-1P60331 282 aa9.71□□□□□ -0.86
TMEM39A-203ENST00000461654 LINC01620Q4KN68 170 aa9.71□□□□□ -0.86
TMEM39A-203ENST00000461654 M0R378 163 aa9.7□□□□□ -0.86
TMEM39A-203ENST00000461654 VPREB1P12018 145 aa9.7□□□□□ -0.86
TMEM39A-203ENST00000461654 PRR3P79522 188 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-203ENST00000461654 LINC00337Q8N6G1 96 aa9.7□□□□□ -0.86
TMEM39A-203ENST00000461654 DPH3Q96FX2 82 aa9.7□□□□□ -0.86
TMEM39A-203ENST00000461654 TMEM126AQ9H061 195 aa9.7□□□□□ -0.86
TMEM39A-203ENST00000461654 C9orf118A6NHY6 69 aa9.69□□□□□ -0.86
TMEM39A-203ENST00000461654 PSMB2P49721 201 aa9.69□□□□□ -0.86
TMEM39A-203ENST00000461654 CBY1Q9Y3M2 126 aa9.69□□□□□ -0.86
TMEM39A-203ENST00000461654 TSPAN13O95857 204 aa9.68□□□□□ -0.86
TMEM39A-203ENST00000461654 FAM19A5Q7Z5A7 132 aaPredicted RBP9.68□□□□□ -0.86
TMEM39A-203ENST00000461654 Q8NDZ9 215 aa9.68□□□□□ -0.86
TMEM39A-203ENST00000461654 IGLV5-37A0A075B6J1 123 aa9.67□□□□□ -0.86
TMEM39A-203ENST00000461654 H3BUT2 72 aa9.67□□□□□ -0.86
TMEM39A-203ENST00000461654 SERTAD4-AS1Q5TG53 156 aa9.67□□□□□ -0.86
TMEM39A-203ENST00000461654 CHTF8P0CG12 524 aa9.66□□□□□ -0.86
TMEM39A-203ENST00000461654 FAM168BA1KXE4 195 aa9.65□□□□□ -0.86
TMEM39A-203ENST00000461654 COX6CP09669 75 aa9.65□□□□□ -0.86
TMEM39A-203ENST00000461654 LYRM7Q5U5X0 104 aa9.65□□□□□ -0.86
TMEM39A-203ENST00000461654 EPM2AB3EWF7 344 aa9.64□□□□□ -0.87
TMEM39A-203ENST00000461654 SCGB1C2P0DMR2 95 aa9.64□□□□□ -0.87
TMEM39A-203ENST00000461654 NAA38Q9BRA0 125 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-203ENST00000461654 C22orf24Q9Y442 160 aa9.64□□□□□ -0.87
TMEM39A-203ENST00000461654 M0QXV9 152 aa9.63□□□□□ -0.87
TMEM39A-203ENST00000461654 IGLV6-57P01721 117 aa9.63□□□□□ -0.87
TMEM39A-203ENST00000461654 FABP2P12104 132 aa9.63□□□□□ -0.87
TMEM39A-203ENST00000461654 MRPL55Q7Z7F7 128 aaKnown RBP9.63□□□□□ -0.87
TMEM39A-203ENST00000461654 SPACA4Q8TDM5 124 aa9.63□□□□□ -0.87
TMEM39A-203ENST00000461654 TRBV10-3A0A0K0K1G6 114 aa9.62□□□□□ -0.87
TMEM39A-203ENST00000461654 A0A1W2PPM0 123 aa9.62□□□□□ -0.87
TMEM39A-203ENST00000461654 GAGE10A6NGK3 116 aa9.62□□□□□ -0.87
TMEM39A-203ENST00000461654 RPL28P46779 137 aaKnown RBP9.62□□□□□ -0.87
TMEM39A-203ENST00000461654 C7orf33Q8WU49 177 aa9.62□□□□□ -0.87
TMEM39A-203ENST00000461654 A0A1W2PNN7 141 aa9.61□□□□□ -0.87
TMEM39A-203ENST00000461654 SMIM11BQ8TCY0 68 aa9.61□□□□□ -0.87
TMEM39A-203ENST00000461654 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms