RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 C20orf197Q8N268 126 aa12.07□□□□□ -0.48
CHRD-208ENST00000460627 NBDYA0A0U1RRE5 68 aa12.07□□□□□ -0.48
CHRD-208ENST00000460627 UQCRQO14949 82 aa12.07□□□□□ -0.48
CHRD-208ENST00000460627 KRTAP10-11P60412 298 aa12.06□□□□□ -0.48
CHRD-208ENST00000460627 DNAH10OSP0CZ25 163 aa12.05□□□□□ -0.48
CHRD-208ENST00000460627 Q8N3U1 123 aa12.04□□□□□ -0.48
CHRD-208ENST00000460627 Q9BRP9 147 aa12.04□□□□□ -0.48
CHRD-208ENST00000460627 WWC2-AS2Q96NR7 200 aa12.03□□□□□ -0.48
CHRD-208ENST00000460627 WFDC13Q8IUB5 93 aa12.02□□□□□ -0.49
CHRD-208ENST00000460627 LINC00612Q8N6U2 182 aa12.02□□□□□ -0.49
CHRD-208ENST00000460627 FAM19A3Q7Z5A8 133 aa12□□□□□ -0.49
CHRD-208ENST00000460627 PRLHP81277 87 aa12□□□□□ -0.49
CHRD-208ENST00000460627 GVQW2A0A096LPI5 108 aaPredicted RBP12□□□□□ -0.49
CHRD-208ENST00000460627 SPATA3Q8NHX4 192 aa12□□□□□ -0.49
CHRD-208ENST00000460627 LINC00167Q96N53 147 aa12□□□□□ -0.49
CHRD-208ENST00000460627 WDFY4Q6ZS81 3184 aa11.99□□□□□ -0.49
CHRD-208ENST00000460627 XGP55808 180 aa11.99□□□□□ -0.49
CHRD-208ENST00000460627 SOSTDC1Q6X4U4 206 aa11.99□□□□□ -0.49
CHRD-208ENST00000460627 CIRBP-AS1Q8TBR5 109 aa11.99□□□□□ -0.49
CHRD-208ENST00000460627 SMCR5Q8TEV8 140 aa11.98□□□□□ -0.49
CHRD-208ENST00000460627 DSPP15924 2871 aaKnown RBP11.98□□□□□ -0.49
CHRD-208ENST00000460627 SERP2Q8N6R1 65 aa11.98□□□□□ -0.49
CHRD-208ENST00000460627 AKAP13Q12802 2813 aa11.96□□□□□ -0.5
CHRD-208ENST00000460627 TRBV7-6A0A0J9YX20 115 aa11.95□□□□□ -0.5
CHRD-208ENST00000460627 J3KT08 172 aa11.94□□□□□ -0.5
CHRD-208ENST00000460627 C3orf22Q8N5N4 141 aa11.94□□□□□ -0.5
CHRD-208ENST00000460627 Q6Q795 121 aa11.94□□□□□ -0.5
CHRD-208ENST00000460627 CASC2Q6XLA1 102 aa11.94□□□□□ -0.5
CHRD-208ENST00000460627 A0A087WSZ3 146 aa11.93□□□□□ -0.5
CHRD-208ENST00000460627 TM2D3Q9BRN9 247 aa11.93□□□□□ -0.5
CHRD-208ENST00000460627 TRIOO75962 3097 aa11.92□□□□□ -0.5
CHRD-208ENST00000460627 TEP1Q99973 2627 aaKnown RBP11.92□□□□□ -0.5
CHRD-208ENST00000460627 C16orf90A8MZG2 172 aa11.92□□□□□ -0.5
CHRD-208ENST00000460627 IGSF10Q6WRI0 2623 aa11.92□□□□□ -0.5
CHRD-208ENST00000460627 NDUFC1O43677 76 aa11.91□□□□□ -0.5
CHRD-208ENST00000460627 PRR34Q9NV39 138 aa11.91□□□□□ -0.5
CHRD-208ENST00000460627 UNC79Q9P2D8 2635 aa11.9□□□□□ -0.5
CHRD-208ENST00000460627 RTL8CO15255 209 aa11.89□□□□□ -0.51
CHRD-208ENST00000460627 C5orf47Q569G3 176 aa11.88□□□□□ -0.51
CHRD-208ENST00000460627 ELOF1P60002 83 aaKnown RBP11.87□□□□□ -0.51
CHRD-208ENST00000460627 CFAP54Q96N23 3096 aa11.87□□□□□ -0.51
CHRD-208ENST00000460627 FAM236DA0A1B0GTK5 79 aa11.86□□□□□ -0.51
CHRD-208ENST00000460627 FAM236CP0DP71 79 aa11.86□□□□□ -0.51
CHRD-208ENST00000460627 SZT2Q5T011 3432 aa11.86□□□□□ -0.51
CHRD-208ENST00000460627 COX7CP15954 63 aa11.86□□□□□ -0.51
CHRD-208ENST00000460627 KIAA0087Q14695 138 aa11.86□□□□□ -0.51
CHRD-208ENST00000460627 LITAFQ99732 161 aa11.86□□□□□ -0.51
CHRD-208ENST00000460627 SEC61GP60059 68 aa11.85□□□□□ -0.51
CHRD-208ENST00000460627 Q6ZVQ6 151 aa11.85□□□□□ -0.51
CHRD-208ENST00000460627 Q6ZRX8 168 aa11.84□□□□□ -0.51
CHRD-208ENST00000460627 LINC00846Q9NV44 126 aa11.83□□□□□ -0.52
CHRD-208ENST00000460627 Q6ZRP5 223 aa11.83□□□□□ -0.52
CHRD-208ENST00000460627 LIMD2Q9BT23 127 aa11.82□□□□□ -0.52
CHRD-208ENST00000460627 PHF5AQ7RTV0 110 aaKnown RBP11.82□□□□□ -0.52
CHRD-208ENST00000460627 XIRP2A4UGR9 3374 aa11.82□□□□□ -0.52
CHRD-208ENST00000460627 TRAV7A0A075B6U4 112 aa11.82□□□□□ -0.52
CHRD-208ENST00000460627 VPREB1P12018 145 aa11.82□□□□□ -0.52
CHRD-208ENST00000460627 ATP5EP56381 51 aaPredicted RBP11.81□□□□□ -0.52
CHRD-208ENST00000460627 CR1P17927 2039 aa11.8□□□□□ -0.52
CHRD-208ENST00000460627 FAM218AQ96MZ4 157 aa11.8□□□□□ -0.52
CHRD-208ENST00000460627 STAB1Q9NY15 2570 aa11.8□□□□□ -0.52
CHRD-208ENST00000460627 IGHV6-1A0A0B4J1U7 121 aa11.8□□□□□ -0.52
CHRD-208ENST00000460627 A0A087WVE0 104 aa11.79□□□□□ -0.52
CHRD-208ENST00000460627 A0A1B0GW54 56 aa11.79□□□□□ -0.52
CHRD-208ENST00000460627 Q8N9L7 120 aa11.79□□□□□ -0.52
CHRD-208ENST00000460627 WIPF1O43516 503 aa11.79□□□□□ -0.52
CHRD-208ENST00000460627 FAM30AQ9NZY2 134 aa11.79□□□□□ -0.52
CHRD-208ENST00000460627 SNURFQ9Y675 71 aa11.78□□□□□ -0.52
CHRD-208ENST00000460627 LINC01547P58512 204 aaPredicted RBP11.78□□□□□ -0.52
CHRD-208ENST00000460627 IGLV6-57P01721 117 aa11.76□□□□□ -0.53
CHRD-208ENST00000460627 CHTF8P0CG12 524 aa11.76□□□□□ -0.53
CHRD-208ENST00000460627 COL6A5A8TX70 2615 aa11.76□□□□□ -0.53
CHRD-208ENST00000460627 SETXQ7Z333 2677 aaKnown RBP11.76□□□□□ -0.53
CHRD-208ENST00000460627 SMCPP49901 116 aaPredicted RBP11.75□□□□□ -0.53
CHRD-208ENST00000460627 TEX15Q9BXT5 2789 aa11.75□□□□□ -0.53
CHRD-208ENST00000460627 EPM2AB3EWF7 344 aa11.74□□□□□ -0.53
CHRD-208ENST00000460627 CXCL6P80162 114 aa11.74□□□□□ -0.53
CHRD-208ENST00000460627 PRO0461Q9UI25 63 aa11.74□□□□□ -0.53
CHRD-208ENST00000460627 BCE1O60756 84 aa11.74□□□□□ -0.53
CHRD-208ENST00000460627 C15orf56Q8N910 161 aa11.74□□□□□ -0.53
CHRD-208ENST00000460627 CHD6Q8TD26 2715 aa11.73□□□□□ -0.53
CHRD-208ENST00000460627 MOBPQ13875 183 aa11.73□□□□□ -0.53
CHRD-208ENST00000460627 LINC00208Q96KT6 92 aa11.72□□□□□ -0.53
CHRD-208ENST00000460627 DEFB116Q30KQ4 102 aa11.71□□□□□ -0.53
CHRD-208ENST00000460627 DNAH14Q0VDD8 3507 aa11.71□□□□□ -0.54
CHRD-208ENST00000460627 FAM229AH3BQW9 127 aa11.7□□□□□ -0.54
CHRD-208ENST00000460627 Q8NBF4 154 aa11.7□□□□□ -0.54
CHRD-208ENST00000460627 VPS13AQ96RL7 3174 aa11.7□□□□□ -0.54
CHRD-208ENST00000460627 CRYGAP11844 174 aa11.7□□□□□ -0.54
CHRD-208ENST00000460627 HCG22E2RYF7 251 aa11.68□□□□□ -0.54
CHRD-208ENST00000460627 KCNQ1DNQ9H478 68 aa11.68□□□□□ -0.54
CHRD-208ENST00000460627 APLNQ9ULZ1 77 aa11.68□□□□□ -0.54
CHRD-208ENST00000460627 ZNF575Q86XF7 245 aa11.68□□□□□ -0.54
CHRD-208ENST00000460627 SERTAD4-AS1Q5TG53 156 aa11.68□□□□□ -0.54
CHRD-208ENST00000460627 LINC00476Q8WZB0 136 aa11.68□□□□□ -0.54
CHRD-208ENST00000460627 CCDC179H3BU77 68 aa11.67□□□□□ -0.54
CHRD-208ENST00000460627 MAP1AP78559 2803 aaPredicted RBP11.67□□□□□ -0.54
CHRD-208ENST00000460627 LOC110117498A0A087WWA1 95 aa11.67□□□□□ -0.54
CHRD-208ENST00000460627 TRBV7-7A0A0K0K1E9 115 aa11.67□□□□□ -0.54
CHRD-208ENST00000460627 C9orf163Q8N9P6 203 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms