RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 COX6CP09669 75 aa-0.11□□□□□ -2.43
PTPN22-203ENST00000460620 ATP5EP56381 51 aaPredicted RBP-0.11□□□□□ -2.43
PTPN22-203ENST00000460620 SARNPP82979 210 aaKnown RBP-0.11□□□□□ -2.43
PTPN22-203ENST00000460620 DEFB112Q30KQ8 113 aa-0.11□□□□□ -2.43
PTPN22-203ENST00000460620 KRTAP6-2Q3LI66 62 aa-0.11□□□□□ -2.43
PTPN22-203ENST00000460620 GTF2H5Q6ZYL4 71 aa-0.11□□□□□ -2.43
PTPN22-203ENST00000460620 C6orf201Q7Z4U5 140 aa-0.11□□□□□ -2.43
PTPN22-203ENST00000460620 C14orf144Q96I85 54 aa-0.11□□□□□ -2.43
PTPN22-203ENST00000460620 PMCHL2Q9BQD1 86 aa-0.11□□□□□ -2.43
PTPN22-203ENST00000460620 PRO1933Q9H354 126 aa-0.11□□□□□ -2.43
PTPN22-203ENST00000460620 CACFD1Q9UGQ2 172 aa-0.11□□□□□ -2.43
PTPN22-203ENST00000460620 PEG3Q9GZU2 1588 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 DIP2CQ9Y2E4 1556 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 C4AP0C0L4 1744 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 C4BP0C0L5 1744 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 RGPD1P0DJD0 1748 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 KIAA1551Q9HCM1 1747 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 REV3LO60673 3130 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 NRXN1Q9ULB1 1477 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 DNHD1Q96M86 4753 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 PKHD1P08F94 4074 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 CLTCQ00610 1675 aaKnown RBP-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 SPG11Q96JI7 2443 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 M0R2T5 61 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 SPRR2BP35325 72 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 GNGT1P63211 74 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 PSMG4Q5JS54 123 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 NCMAPQ5T1S8 102 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 PSENENQ9NZ42 101 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 SETBP1Q9Y6X0 1596 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 FASNP49327 2511 aaKnown RBP-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 NKTRP30414 1462 aaKnown RBP-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 IQSEC2Q5JU85 1478 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 MLH3Q9UHC1 1453 aa-0.12□□□□□ -2.43
PTPN22-203ENST00000460620 TGP01266 2768 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 ZNF831Q5JPB2 1677 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 DOPEY1Q5JWR5 2465 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 RIF1Q5UIP0 2472 aaKnown RBP-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 BIRC6Q9NR09 4857 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 MAPKBP1O60336 1514 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 PDZD2O15018 2839 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 ANKRD36BQ8N2N9 1353 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 QSER1Q2KHR3 1735 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 SUPT6HQ7KZ85 1726 aaKnown RBP-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 TMEM218A2RU14 115 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 H0Y9P7 68 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 H7BZZ5 65 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 SPINK4O60575 86 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 ARMS2P0C7Q2 107 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 SAA2P0DJI9 122 aaPredicted RBP-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 FAUP35544 74 aaKnown RBP-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 MRPS10P82664 201 aaKnown RBP-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 WHAMMP3Q1A5X7 153 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 DEFB135Q30KP9 77 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 TRGV9Q99603 122 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 MRC2Q9UBG0 1479 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 LRRC37AA6NMS7 1700 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 LTN1O94822 1766 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 NCOA3Q9Y6Q9 1424 aa-0.13□□□□□ -2.43
PTPN22-203ENST00000460620 EPG5Q9HCE0 2579 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 TNRC18O15417 2968 aaPredicted RBP-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 STARD9Q9P2P6 4700 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 TRBV25-1A0A075B6N4 114 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 F8WEM9 126 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 H3BQ15 152 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 H3BQF6 201 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 I3L3M4 83 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 COX8AP10176 69 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 KRTDAPP60985 99 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 PMCHL1Q16048 86 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 KRTAP19-8Q3LI54 63 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 COL5A1-AS1Q5SY13 56 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 HEPN1Q6WQI6 88 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 WFDC13Q8IUB5 93 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 USMG5Q96IX5 58 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 CGREF1Q99674 301 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 LYSTQ99698 3801 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 MRPL34Q9BQ48 92 aaKnown RBP-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 VAMP8Q9BV40 100 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 LINC00846Q9NV44 126 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 AP4S1Q9Y587 144 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 PRRC2CQ9Y520 2896 aaKnown RBP-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 LAMA2P24043 3122 aaKnown RBP-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 PRDM15P57071 1507 aaPredicted RBP-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 FAM135AQ9P2D6 1515 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 CNTLNQ9NXG0 1405 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 NF1P21359 2839 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 POLR1AO95602 1720 aaPredicted RBP-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 DOT1LQ8TEK3 1739 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 TRAV30A0A087WSZ9 112 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 LEPROTL1O95214 131 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 UQCRHP07919 91 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 IGLC2P0DOY2 106 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 IGLC3P0DOY3 106 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 S100PP25815 95 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 RBP2P50120 134 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 KRTAP20-2Q3LI61 65 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 HIGD1BQ9P298 99 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 LAMA5O15230 3695 aa-0.14□□□□□ -2.43
PTPN22-203ENST00000460620 AKAP13Q12802 2813 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms