RNA–Protein interactions for RNA: ENST00000458397.1

GAPDHP53-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 53, humanhuman

BASIC

Gene GAPDHP53, Length 924 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP53-201ENST00000458397 NDUFA12Q9UI09 145 aa4.35□□□□□ -1.71
GAPDHP53-201ENST00000458397 C22orf24Q9Y442 160 aa4.35□□□□□ -1.71
GAPDHP53-201ENST00000458397 KRTAP29-1A8MX34 341 aaPredicted RBP4.34□□□□□ -1.71
GAPDHP53-201ENST00000458397 VPREB1P12018 145 aa4.34□□□□□ -1.71
GAPDHP53-201ENST00000458397 KRTDAPP60985 99 aa4.34□□□□□ -1.71
GAPDHP53-201ENST00000458397 HERV-K104P63124 156 aa4.34□□□□□ -1.71
GAPDHP53-201ENST00000458397 IGKV2D-26A0A0A0MRZ7 120 aa4.33□□□□□ -1.72
GAPDHP53-201ENST00000458397 MYMXA0A1B0GTQ4 84 aa4.33□□□□□ -1.72
GAPDHP53-201ENST00000458397 SMIM13P0DJ93 91 aa4.33□□□□□ -1.72
GAPDHP53-201ENST00000458397 NMUP48645 174 aa4.33□□□□□ -1.72
GAPDHP53-201ENST00000458397 HERVK_113P61574 105 aa4.33□□□□□ -1.72
GAPDHP53-201ENST00000458397 LOC107984156A0A0G2JMH3 177 aa4.32□□□□□ -1.72
GAPDHP53-201ENST00000458397 C5orf52A6NGY3 159 aa4.32□□□□□ -1.72
GAPDHP53-201ENST00000458397 MT1HL1P0DM35 61 aa4.32□□□□□ -1.72
GAPDHP53-201ENST00000458397 MRPL55Q7Z7F7 128 aaKnown RBP4.32□□□□□ -1.72
GAPDHP53-201ENST00000458397 ARL17AQ8IVW1 177 aa4.32□□□□□ -1.72
GAPDHP53-201ENST00000458397 MIR7-3HGQ8N6C7 128 aa4.32□□□□□ -1.72
GAPDHP53-201ENST00000458397 LINC00167Q96N53 147 aa4.32□□□□□ -1.72
GAPDHP53-201ENST00000458397 LITAFQ99732 161 aa4.32□□□□□ -1.72
GAPDHP53-201ENST00000458397 A0A0J9YXY3 114 aa4.31□□□□□ -1.72
GAPDHP53-201ENST00000458397 A0A0U1RRA0 63 aa4.31□□□□□ -1.72
GAPDHP53-201ENST00000458397 IGLV7-43P04211 117 aa4.31□□□□□ -1.72
GAPDHP53-201ENST00000458397 LGALS3P17931 250 aaKnown RBP4.31□□□□□ -1.72
GAPDHP53-201ENST00000458397 LINC00158P58513 81 aa4.31□□□□□ -1.72
GAPDHP53-201ENST00000458397 SNRPEP62304 92 aaKnown RBP4.31□□□□□ -1.72
GAPDHP53-201ENST00000458397 LBHQ53QV2 105 aaPredicted RBP4.31□□□□□ -1.72
GAPDHP53-201ENST00000458397 ANKRD39Q53RE8 183 aa4.31□□□□□ -1.72
GAPDHP53-201ENST00000458397 C1orf137Q5JT78 98 aa4.31□□□□□ -1.72
GAPDHP53-201ENST00000458397 SPINK6Q6UWN8 80 aa4.31□□□□□ -1.72
GAPDHP53-201ENST00000458397 TTTY13Q9BZ97 58 aa4.31□□□□□ -1.72
GAPDHP53-201ENST00000458397 C20orf202A1L168 122 aa4.3□□□□□ -1.72
GAPDHP53-201ENST00000458397 EIF4EBP3O60516 100 aaPredicted RBP4.3□□□□□ -1.72
GAPDHP53-201ENST00000458397 OXTP01178 125 aa4.3□□□□□ -1.72
GAPDHP53-201ENST00000458397 UBE2BP63146 152 aa4.3□□□□□ -1.72
GAPDHP53-201ENST00000458397 MEIG1Q5JSS6 88 aa4.3□□□□□ -1.72
GAPDHP53-201ENST00000458397 ADAMTSL4-AS1Q5T5F5 129 aa4.3□□□□□ -1.72
GAPDHP53-201ENST00000458397 SOSTDC1Q6X4U4 206 aa4.3□□□□□ -1.72
GAPDHP53-201ENST00000458397 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
GAPDHP53-201ENST00000458397 ATOH7Q8N100 152 aa4.3□□□□□ -1.72
GAPDHP53-201ENST00000458397 DAND5Q8N907 189 aa4.3□□□□□ -1.72
GAPDHP53-201ENST00000458397 IGLV1-50A0A075B6I6 118 aa4.29□□□□□ -1.72
GAPDHP53-201ENST00000458397 GAGE10A6NGK3 116 aa4.29□□□□□ -1.72
GAPDHP53-201ENST00000458397 RPL37AP8A6NKH3 93 aa4.29□□□□□ -1.72
GAPDHP53-201ENST00000458397 LINC00587B1AMM8 73 aa4.29□□□□□ -1.72
GAPDHP53-201ENST00000458397 S100A6P06703 90 aa4.29□□□□□ -1.72
GAPDHP53-201ENST00000458397 S100A2P29034 98 aa4.29□□□□□ -1.72
GAPDHP53-201ENST00000458397 NKAPP1Q8N9T2 125 aa4.29□□□□□ -1.72
GAPDHP53-201ENST00000458397 BCE1O60756 84 aa4.28□□□□□ -1.72
GAPDHP53-201ENST00000458397 TIMM17BO60830 172 aa4.28□□□□□ -1.72
GAPDHP53-201ENST00000458397 KRTAP1-4P0C5Y4 121 aa4.28□□□□□ -1.72
GAPDHP53-201ENST00000458397 RPL24P83731 157 aaKnown RBP4.28□□□□□ -1.72
GAPDHP53-201ENST00000458397 BOD1L2Q8IYS8 172 aa4.28□□□□□ -1.72
GAPDHP53-201ENST00000458397 LINC01600Q96MT4 127 aa4.28□□□□□ -1.72
GAPDHP53-201ENST00000458397 IGKV2-28A0A075B6P5 120 aa4.27□□□□□ -1.73
GAPDHP53-201ENST00000458397 ZNF815PA8K554 130 aa4.27□□□□□ -1.73
GAPDHP53-201ENST00000458397 TMEM238C9JI98 176 aa4.27□□□□□ -1.73
GAPDHP53-201ENST00000458397 H0Y9J4 135 aa4.27□□□□□ -1.73
GAPDHP53-201ENST00000458397 M0R378 163 aa4.27□□□□□ -1.73
GAPDHP53-201ENST00000458397 ZNF861PO60384 105 aa4.27□□□□□ -1.73
GAPDHP53-201ENST00000458397 IGKV2D-28P01615 120 aa4.27□□□□□ -1.73
GAPDHP53-201ENST00000458397 AKR1D1P51857 326 aa4.27□□□□□ -1.73
GAPDHP53-201ENST00000458397 PCP2Q8IVA1 136 aa4.27□□□□□ -1.73
GAPDHP53-201ENST00000458397 KRTAP4-16G5E9R7 235 aaPredicted RBP4.26□□□□□ -1.73
GAPDHP53-201ENST00000458397 NDUFC2O95298 119 aa4.26□□□□□ -1.73
GAPDHP53-201ENST00000458397 SPRR1AP35321 89 aa4.26□□□□□ -1.73
GAPDHP53-201ENST00000458397 KRTAP10-8P60410 259 aa4.26□□□□□ -1.73
GAPDHP53-201ENST00000458397 TMEM126AQ9H061 195 aa4.26□□□□□ -1.73
GAPDHP53-201ENST00000458397 TRBV10-2A0A0K0K1G8 114 aa4.25□□□□□ -1.73
GAPDHP53-201ENST00000458397 J3QL48 77 aa4.25□□□□□ -1.73
GAPDHP53-201ENST00000458397 NCR3O14931 201 aa4.25□□□□□ -1.73
GAPDHP53-201ENST00000458397 LINC00308Q8TCZ7 52 aa4.25□□□□□ -1.73
GAPDHP53-201ENST00000458397 DIRC1Q969H9 104 aa4.25□□□□□ -1.73
GAPDHP53-201ENST00000458397 KCNQ1DNQ9H478 68 aa4.25□□□□□ -1.73
GAPDHP53-201ENST00000458397 TRBV10-3A0A0K0K1G6 114 aa4.24□□□□□ -1.73
GAPDHP53-201ENST00000458397 IGLV6-57P01721 117 aa4.24□□□□□ -1.73
GAPDHP53-201ENST00000458397 REG3GQ6UW15 175 aa4.24□□□□□ -1.73
GAPDHP53-201ENST00000458397 SPANXDQ9BXN6 97 aa4.24□□□□□ -1.73
GAPDHP53-201ENST00000458397 PPDPFQ9H3Y8 114 aa4.24□□□□□ -1.73
GAPDHP53-201ENST00000458397 SPANXB1Q9NS25 103 aaPredicted RBP4.24□□□□□ -1.73
GAPDHP53-201ENST00000458397 SPANXCQ9NY87 97 aa4.24□□□□□ -1.73
GAPDHP53-201ENST00000458397 PRYO14603 147 aa4.23□□□□□ -1.73
GAPDHP53-201ENST00000458397 RPL28P46779 137 aaKnown RBP4.23□□□□□ -1.73
GAPDHP53-201ENST00000458397 NPC2P61916 151 aa4.23□□□□□ -1.73
GAPDHP53-201ENST00000458397 PRLHP81277 87 aa4.23□□□□□ -1.73
GAPDHP53-201ENST00000458397 SCGB1D1O95968 90 aa4.22□□□□□ -1.73
GAPDHP53-201ENST00000458397 JOSD1Q15040 202 aaPredicted RBP4.22□□□□□ -1.73
GAPDHP53-201ENST00000458397 LINC00337Q8N6G1 96 aa4.22□□□□□ -1.73
GAPDHP53-201ENST00000458397 MIEN1Q9BRT3 115 aa4.22□□□□□ -1.73
GAPDHP53-201ENST00000458397 RNF213Q63HN8 5207 aa4.22□□□□□ -1.73
GAPDHP53-201ENST00000458397 LRP2P98164 4655 aa4.21□□□□□ -1.73
GAPDHP53-201ENST00000458397 DDTP30046 118 aa4.21□□□□□ -1.74
GAPDHP53-201ENST00000458397 UBE2AP49459 152 aa4.21□□□□□ -1.74
GAPDHP53-201ENST00000458397 SCGB1D4Q6XE38 83 aa4.21□□□□□ -1.74
GAPDHP53-201ENST00000458397 Q6ZVH6 145 aa4.21□□□□□ -1.74
GAPDHP53-201ENST00000458397 FAM19A1Q7Z5A9 133 aa4.21□□□□□ -1.74
GAPDHP53-201ENST00000458397 PRR26Q8N8Z3 221 aa4.21□□□□□ -1.74
GAPDHP53-201ENST00000458397 A0A087X002 238 aa4.2□□□□□ -1.74
GAPDHP53-201ENST00000458397 B5MCH6 92 aa4.2□□□□□ -1.74
GAPDHP53-201ENST00000458397 HSBP1L1C9JCN9 74 aa4.2□□□□□ -1.74
GAPDHP53-201ENST00000458397 DLEU1O43261 78 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms