RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 COX17Q14061 63 aa3.18□□□□□ -1.9
RIF1-207ENST00000454583 RNF151Q2KHN1 245 aa3.18□□□□□ -1.9
RIF1-207ENST00000454583 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.18□□□□□ -1.9
RIF1-207ENST00000454583 KRTAP4-16G5E9R7 235 aaPredicted RBP3.17□□□□□ -1.9
RIF1-207ENST00000454583 CD164L2Q6UWJ8 174 aa3.17□□□□□ -1.9
RIF1-207ENST00000454583 SPCS1Q9Y6A9 102 aa3.17□□□□□ -1.9
RIF1-207ENST00000454583 IGLV5-37A0A075B6J1 123 aa3.17□□□□□ -1.9
RIF1-207ENST00000454583 LOC100996750A0A140TA64 210 aa3.17□□□□□ -1.9
RIF1-207ENST00000454583 TMEM170BQ5T4T1 132 aa3.17□□□□□ -1.9
RIF1-207ENST00000454583 COX7B2Q8TF08 81 aa3.17□□□□□ -1.9
RIF1-207ENST00000454583 HIST1H4GQ99525 98 aa3.17□□□□□ -1.9
RIF1-207ENST00000454583 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
RIF1-207ENST00000454583 TRGV2A0A075B6R0 118 aa3.17□□□□□ -1.9
RIF1-207ENST00000454583 Q9H8V8 135 aa3.17□□□□□ -1.9
RIF1-207ENST00000454583 TRBV20-1A0A075B6N2 111 aa3.16□□□□□ -1.9
RIF1-207ENST00000454583 TRGV4A0A0C4DH28 118 aa3.16□□□□□ -1.9
RIF1-207ENST00000454583 IGLV6-57P01721 117 aa3.16□□□□□ -1.9
RIF1-207ENST00000454583 HTN1P15515 57 aa3.16□□□□□ -1.9
RIF1-207ENST00000454583 TRAV8-4A0A0B4J246 113 aa3.16□□□□□ -1.9
RIF1-207ENST00000454583 F8WDY8 70 aa3.16□□□□□ -1.9
RIF1-207ENST00000454583 PANO1I0J062 215 aa3.16□□□□□ -1.9
RIF1-207ENST00000454583 CCL18P55774 89 aa3.16□□□□□ -1.9
RIF1-207ENST00000454583 SFTA2Q6UW10 78 aa3.16□□□□□ -1.9
RIF1-207ENST00000454583 PLA2G2DQ9UNK4 145 aa3.16□□□□□ -1.9
RIF1-207ENST00000454583 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.16□□□□□ -1.9
RIF1-207ENST00000454583 GAGE10A6NGK3 116 aa3.16□□□□□ -1.9
RIF1-207ENST00000454583 LGALS3P17931 250 aaKnown RBP3.16□□□□□ -1.9
RIF1-207ENST00000454583 RPL24P83731 157 aaKnown RBP3.16□□□□□ -1.9
RIF1-207ENST00000454583 KRTAP11-1Q8IUC1 163 aa3.16□□□□□ -1.9
RIF1-207ENST00000454583 FABP2P12104 132 aa3.15□□□□□ -1.9
RIF1-207ENST00000454583 KRTAP13-1Q8IUC0 172 aa3.15□□□□□ -1.9
RIF1-207ENST00000454583 REG3AQ06141 175 aa3.15□□□□□ -1.91
RIF1-207ENST00000454583 C9orf129Q5T035 196 aaKnown RBP3.15□□□□□ -1.91
RIF1-207ENST00000454583 C10orf25Q5T742 122 aa3.15□□□□□ -1.91
RIF1-207ENST00000454583 GTF2H5Q6ZYL4 71 aa3.15□□□□□ -1.91
RIF1-207ENST00000454583 RAB37Q96AX2 223 aa3.15□□□□□ -1.91
RIF1-207ENST00000454583 LINC00269Q8N2A0 174 aa3.14□□□□□ -1.91
RIF1-207ENST00000454583 TRBV10-2A0A0K0K1G8 114 aa3.14□□□□□ -1.91
RIF1-207ENST00000454583 COX7A2LO14548 114 aa3.14□□□□□ -1.91
RIF1-207ENST00000454583 GAGE6Q13070 117 aa3.14□□□□□ -1.91
RIF1-207ENST00000454583 TEN1Q86WV5 123 aa3.14□□□□□ -1.91
RIF1-207ENST00000454583 Q8N814 137 aa3.14□□□□□ -1.91
RIF1-207ENST00000454583 C6orf48Q9UBA6 75 aa3.14□□□□□ -1.91
RIF1-207ENST00000454583 C2orf48Q96LS8 159 aa3.13□□□□□ -1.91
RIF1-207ENST00000454583 FAM240AA0A1B0GVK7 77 aa3.13□□□□□ -1.91
RIF1-207ENST00000454583 A0A1B0GX51 115 aa3.13□□□□□ -1.91
RIF1-207ENST00000454583 TRACP01848 142 aa3.13□□□□□ -1.91
RIF1-207ENST00000454583 KRTAP10-2P60368 255 aa3.13□□□□□ -1.91
RIF1-207ENST00000454583 SMAGPQ0VAQ4 97 aa3.13□□□□□ -1.91
RIF1-207ENST00000454583 DAND5Q8N907 189 aa3.13□□□□□ -1.91
RIF1-207ENST00000454583 PRSS2P07478 247 aa3.13□□□□□ -1.91
RIF1-207ENST00000454583 SPRR1AP35321 89 aa3.13□□□□□ -1.91
RIF1-207ENST00000454583 LINC01620Q4KN68 170 aa3.13□□□□□ -1.91
RIF1-207ENST00000454583 CHCHD10Q8WYQ3 142 aaPredicted RBP3.13□□□□□ -1.91
RIF1-207ENST00000454583 ERG28Q9UKR5 140 aa3.13□□□□□ -1.91
RIF1-207ENST00000454583 LINC01547P58512 204 aaPredicted RBP3.12□□□□□ -1.91
RIF1-207ENST00000454583 VAMP3Q15836 100 aa3.12□□□□□ -1.91
RIF1-207ENST00000454583 A0A087WTM6 91 aa3.12□□□□□ -1.91
RIF1-207ENST00000454583 H3BT86 120 aa3.12□□□□□ -1.91
RIF1-207ENST00000454583 CXCL5P42830 114 aa3.12□□□□□ -1.91
RIF1-207ENST00000454583 ANKRD29Q8N6D5 301 aa3.12□□□□□ -1.91
RIF1-207ENST00000454583 SPACA4Q8TDM5 124 aa3.12□□□□□ -1.91
RIF1-207ENST00000454583 VPREB1P12018 145 aa3.12□□□□□ -1.91
RIF1-207ENST00000454583 TRAV13-1A0A0B4J241 112 aa3.11□□□□□ -1.91
RIF1-207ENST00000454583 TRBV7-6A0A0J9YX20 115 aa3.11□□□□□ -1.91
RIF1-207ENST00000454583 HIST1H4AP62805 103 aaKnown RBP3.11□□□□□ -1.91
RIF1-207ENST00000454583 SMIM11BQ8TCY0 68 aa3.11□□□□□ -1.91
RIF1-207ENST00000454583 SMCR5Q8TEV8 140 aa3.11□□□□□ -1.91
RIF1-207ENST00000454583 SND1-IT1Q9HBX3 110 aa3.11□□□□□ -1.91
RIF1-207ENST00000454583 SRRM2Q9UQ35 2752 aaKnown RBP3.11□□□□□ -1.91
RIF1-207ENST00000454583 A0A087WYN8 130 aa3.11□□□□□ -1.91
RIF1-207ENST00000454583 C6orf223Q8N319 242 aa3.11□□□□□ -1.91
RIF1-207ENST00000454583 MIR7-3HGQ8N6C7 128 aa3.11□□□□□ -1.91
RIF1-207ENST00000454583 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
RIF1-207ENST00000454583 SCGB1A1P11684 91 aa3.11□□□□□ -1.91
RIF1-207ENST00000454583 XGP55808 180 aa3.11□□□□□ -1.91
RIF1-207ENST00000454583 Q6ZRP5 223 aa3.11□□□□□ -1.91
RIF1-207ENST00000454583 SCGB1D4Q6XE38 83 aa3.1□□□□□ -1.91
RIF1-207ENST00000454583 C9orf163Q8N9P6 203 aa3.1□□□□□ -1.91
RIF1-207ENST00000454583 CLEC2BQ92478 149 aa3.1□□□□□ -1.91
RIF1-207ENST00000454583 GEMIN7Q9H840 131 aaKnown RBP3.1□□□□□ -1.91
RIF1-207ENST00000454583 MEIG1Q5JSS6 88 aa3.1□□□□□ -1.91
RIF1-207ENST00000454583 SLC25A20O43772 301 aa3.09□□□□□ -1.91
RIF1-207ENST00000454583 ATXN8Q156A1 80 aa3.09□□□□□ -1.91
RIF1-207ENST00000454583 GAGE12HA6NDE8 117 aa3.09□□□□□ -1.92
RIF1-207ENST00000454583 APOMO95445 188 aa3.09□□□□□ -1.92
RIF1-207ENST00000454583 ETDBQ3ZM63 59 aa3.09□□□□□ -1.92
RIF1-207ENST00000454583 Q6ZRU5 148 aa3.09□□□□□ -1.92
RIF1-207ENST00000454583 PLAC8Q9NZF1 115 aa3.09□□□□□ -1.92
RIF1-207ENST00000454583 TRBV7-7A0A0K0K1E9 115 aa3.08□□□□□ -1.92
RIF1-207ENST00000454583 SRSF9Q13242 221 aaKnown RBP eCLIP3.08□□□□□ -1.92
RIF1-207ENST00000454583 PPDPFLQ8WWR9 84 aa3.08□□□□□ -1.92
RIF1-207ENST00000454583 KLK12Q9UKR0 248 aa3.08□□□□□ -1.92
RIF1-207ENST00000454583 UBE2L6O14933 153 aa3.08□□□□□ -1.92
RIF1-207ENST00000454583 C9orf116Q5BN46 136 aaPredicted RBP3.08□□□□□ -1.92
RIF1-207ENST00000454583 DGAT2L7PQ6IED9 249 aa3.08□□□□□ -1.92
RIF1-207ENST00000454583 Q6Q795 121 aa3.08□□□□□ -1.92
RIF1-207ENST00000454583 UNQ6190/PRO20217Q6UXQ8 127 aa3.08□□□□□ -1.92
RIF1-207ENST00000454583 LPAP08519 4548 aa3.08□□□□□ -1.92
RIF1-207ENST00000454583 IGLV10-54A0A075B6I4 117 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms