RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 FABP9Q0Z7S8 132 aa13.58□□□□□ -0.24
LYSMD2-202ENST00000454181 COX19Q49B96 90 aa13.58□□□□□ -0.24
LYSMD2-202ENST00000454181 FP248Q71RG6 208 aaPredicted RBP13.57□□□□□ -0.24
LYSMD2-202ENST00000454181 ZNF706Q9Y5V0 76 aaPredicted RBP13.57□□□□□ -0.24
LYSMD2-202ENST00000454181 SPRR4Q96PI1 79 aa13.56□□□□□ -0.24
LYSMD2-202ENST00000454181 LINC00158P58513 81 aa13.54□□□□□ -0.24
LYSMD2-202ENST00000454181 TMEM170BQ5T4T1 132 aa13.53□□□□□ -0.24
LYSMD2-202ENST00000454181 Q8NDZ9 215 aa13.53□□□□□ -0.24
LYSMD2-202ENST00000454181 TMEM218A2RU14 115 aa13.51□□□□□ -0.25
LYSMD2-202ENST00000454181 CLLU1Q5K131 121 aa13.51□□□□□ -0.25
LYSMD2-202ENST00000454181 UQCC3Q6UW78 93 aa13.51□□□□□ -0.25
LYSMD2-202ENST00000454181 BAGE3Q86Y29 109 aa13.5□□□□□ -0.25
LYSMD2-202ENST00000454181 ATP6V1G1O75348 118 aa13.49□□□□□ -0.25
LYSMD2-202ENST00000454181 HBDP02042 147 aa13.49□□□□□ -0.25
LYSMD2-202ENST00000454181 Q8NBF4 154 aa13.49□□□□□ -0.25
LYSMD2-202ENST00000454181 A0A0U1RRA0 63 aa13.48□□□□□ -0.25
LYSMD2-202ENST00000454181 C11orf86A6NJI1 115 aa13.48□□□□□ -0.25
LYSMD2-202ENST00000454181 LINC00614P0C842 121 aa13.48□□□□□ -0.25
LYSMD2-202ENST00000454181 DAND5Q8N907 189 aa13.48□□□□□ -0.25
LYSMD2-202ENST00000454181 SEC11CQ9BY50 192 aa13.48□□□□□ -0.25
LYSMD2-202ENST00000454181 A0A096LNJ9 63 aa13.47□□□□□ -0.25
LYSMD2-202ENST00000454181 LINC01547P58512 204 aaPredicted RBP13.46□□□□□ -0.25
LYSMD2-202ENST00000454181 PRYO14603 147 aa13.45□□□□□ -0.26
LYSMD2-202ENST00000454181 SPINK1P00995 79 aa13.44□□□□□ -0.26
LYSMD2-202ENST00000454181 PMCHL1Q16048 86 aa13.44□□□□□ -0.26
LYSMD2-202ENST00000454181 KRTAP13-3Q3SY46 172 aa13.44□□□□□ -0.26
LYSMD2-202ENST00000454181 ASB16-AS1Q495Z4 193 aa13.43□□□□□ -0.26
LYSMD2-202ENST00000454181 BOD1L2Q8IYS8 172 aa13.43□□□□□ -0.26
LYSMD2-202ENST00000454181 SMCR5Q8TEV8 140 aa13.43□□□□□ -0.26
LYSMD2-202ENST00000454181 ETDCA0A1B0GVM5 59 aa13.42□□□□□ -0.26
LYSMD2-202ENST00000454181 NDUFA12Q9UI09 145 aa13.42□□□□□ -0.26
LYSMD2-202ENST00000454181 CHTOPQ9Y3Y2 248 aaKnown RBP13.42□□□□□ -0.26
LYSMD2-202ENST00000454181 SEC61BP60468 96 aaKnown RBP13.41□□□□□ -0.26
LYSMD2-202ENST00000454181 C18orf32Q8TCD1 76 aa13.41□□□□□ -0.26
LYSMD2-202ENST00000454181 URB1-AS1Q96HZ7 61 aa13.41□□□□□ -0.26
LYSMD2-202ENST00000454181 S100A12P80511 92 aa13.4□□□□□ -0.26
LYSMD2-202ENST00000454181 MEIG1Q5JSS6 88 aa13.4□□□□□ -0.26
LYSMD2-202ENST00000454181 TRAPPC1Q9Y5R8 145 aa13.4□□□□□ -0.26
LYSMD2-202ENST00000454181 NCR3O14931 201 aa13.39□□□□□ -0.27
LYSMD2-202ENST00000454181 RPS10P5Q9NQ39 176 aa13.39□□□□□ -0.27
LYSMD2-202ENST00000454181 SMIM13P0DJ93 91 aa13.38□□□□□ -0.27
LYSMD2-202ENST00000454181 KCNQ1DNQ9H478 68 aa13.38□□□□□ -0.27
LYSMD2-202ENST00000454181 TMEM223A0PJW6 202 aa13.36□□□□□ -0.27
LYSMD2-202ENST00000454181 SPRR1AP35321 89 aa13.36□□□□□ -0.27
LYSMD2-202ENST00000454181 GAGE2AQ6NT46 116 aa13.36□□□□□ -0.27
LYSMD2-202ENST00000454181 RHEBQ15382 184 aa13.35□□□□□ -0.27
LYSMD2-202ENST00000454181 LINC00587B1AMM8 73 aa13.34□□□□□ -0.27
LYSMD2-202ENST00000454181 FAM19A2Q8N3H0 131 aa13.34□□□□□ -0.27
LYSMD2-202ENST00000454181 MIR7-3HGQ8N6C7 128 aa13.34□□□□□ -0.27
LYSMD2-202ENST00000454181 LINC00483Q53H64 154 aa13.33□□□□□ -0.28
LYSMD2-202ENST00000454181 IGLV9-49A0A0B4J1Y8 123 aa13.32□□□□□ -0.28
LYSMD2-202ENST00000454181 TRBV10-3A0A0K0K1G6 114 aa13.32□□□□□ -0.28
LYSMD2-202ENST00000454181 HERV-K104P63124 156 aa13.32□□□□□ -0.28
LYSMD2-202ENST00000454181 MOBPQ13875 183 aa13.32□□□□□ -0.28
LYSMD2-202ENST00000454181 KRTAP4-16G5E9R7 235 aaPredicted RBP13.31□□□□□ -0.28
LYSMD2-202ENST00000454181 MAP1LC3CQ9BXW4 147 aa13.31□□□□□ -0.28
LYSMD2-202ENST00000454181 SSBP3-AS1Q7Z2R9 100 aa13.3□□□□□ -0.28
LYSMD2-202ENST00000454181 TRAV12-1A0A0B4J245 112 aa13.29□□□□□ -0.28
LYSMD2-202ENST00000454181 SLC25A20O43772 301 aa13.28□□□□□ -0.28
LYSMD2-202ENST00000454181 RPS29P62273 56 aaKnown RBP13.28□□□□□ -0.28
LYSMD2-202ENST00000454181 IFI27L1Q96BM0 104 aa13.28□□□□□ -0.28
LYSMD2-202ENST00000454181 COMMD7Q86VX2 200 aa13.27□□□□□ -0.29
LYSMD2-202ENST00000454181 KRTAP4-1Q9BYQ7 146 aa13.27□□□□□ -0.29
LYSMD2-202ENST00000454181 MYMXA0A1B0GTQ4 84 aa13.26□□□□□ -0.29
LYSMD2-202ENST00000454181 B5MCH6 92 aa13.26□□□□□ -0.29
LYSMD2-202ENST00000454181 Q8N377 158 aa13.26□□□□□ -0.29
LYSMD2-202ENST00000454181 C10orf91Q5T1B1 145 aa13.25□□□□□ -0.29
LYSMD2-202ENST00000454181 DDTP30046 118 aa13.23□□□□□ -0.29
LYSMD2-202ENST00000454181 ERC2-IT1O76042 136 aa13.22□□□□□ -0.29
LYSMD2-202ENST00000454181 CHCHD1Q96BP2 118 aaKnown RBP13.22□□□□□ -0.29
LYSMD2-202ENST00000454181 IFITM2Q01629 132 aa13.2□□□□□ -0.3
LYSMD2-202ENST00000454181 C9orf153Q5TBE3 101 aa13.19□□□□□ -0.3
LYSMD2-202ENST00000454181 TRBV10-2A0A0K0K1G8 114 aa13.18□□□□□ -0.3
LYSMD2-202ENST00000454181 Q6ZRX8 168 aa13.18□□□□□ -0.3
LYSMD2-202ENST00000454181 MIEN1Q9BRT3 115 aa13.18□□□□□ -0.3
LYSMD2-202ENST00000454181 S100A7L2Q5SY68 101 aa13.17□□□□□ -0.3
LYSMD2-202ENST00000454181 XP32Q5T750 250 aa13.17□□□□□ -0.3
LYSMD2-202ENST00000454181 Q9BRP9 147 aa13.17□□□□□ -0.3
LYSMD2-202ENST00000454181 JOSD1Q15040 202 aaPredicted RBP13.16□□□□□ -0.3
LYSMD2-202ENST00000454181 H0Y8G0 127 aa13.15□□□□□ -0.3
LYSMD2-202ENST00000454181 LOC107984156A0A0G2JMH3 177 aa13.14□□□□□ -0.31
LYSMD2-202ENST00000454181 ARL17AQ8IVW1 177 aa13.14□□□□□ -0.31
LYSMD2-202ENST00000454181 SPANXB1Q9NS25 103 aaPredicted RBP13.14□□□□□ -0.31
LYSMD2-202ENST00000454181 HSBP1O75506 76 aa13.13□□□□□ -0.31
LYSMD2-202ENST00000454181 LEPROTO15243 131 aa13.12□□□□□ -0.31
LYSMD2-202ENST00000454181 APOC3P02656 99 aa13.11□□□□□ -0.31
LYSMD2-202ENST00000454181 CRCT1Q9UGL9 99 aa13.1□□□□□ -0.31
LYSMD2-202ENST00000454181 SNAPINO95295 136 aa13.09□□□□□ -0.31
LYSMD2-202ENST00000454181 TSPEAR-AS2P59090 65 aa13.09□□□□□ -0.31
LYSMD2-202ENST00000454181 TRAV23DV6A0A075B6W5 121 aa13.08□□□□□ -0.32
LYSMD2-202ENST00000454181 NDUFA5Q16718 116 aa13.08□□□□□ -0.32
LYSMD2-202ENST00000454181 NDUFC2O95298 119 aa13.07□□□□□ -0.32
LYSMD2-202ENST00000454181 IGLV6-57P01721 117 aa13.07□□□□□ -0.32
LYSMD2-202ENST00000454181 HERVK_113P61574 105 aa13.07□□□□□ -0.32
LYSMD2-202ENST00000454181 J3QQQ9 107 aa13.06□□□□□ -0.32
LYSMD2-202ENST00000454181 HINT1P49773 126 aaPredicted RBP13.06□□□□□ -0.32
LYSMD2-202ENST00000454181 SVBPQ8N300 66 aa13.06□□□□□ -0.32
LYSMD2-202ENST00000454181 LGALS3P17931 250 aaKnown RBP13.05□□□□□ -0.32
LYSMD2-202ENST00000454181 PLNP26678 52 aa13.05□□□□□ -0.32
LYSMD2-202ENST00000454181 NMUP48645 174 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms