RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 PYY3Q5JQD4 70 aa7.04□□□□□ -1.28
HERC3-207ENST00000452979 IGLV1-50A0A075B6I6 118 aa7.03□□□□□ -1.28
HERC3-207ENST00000452979 LOC105371267A0A1B0GV96 52 aa7.03□□□□□ -1.28
HERC3-207ENST00000452979 F8WDY8 70 aa7.03□□□□□ -1.28
HERC3-207ENST00000452979 LEPROTO15243 131 aa7.03□□□□□ -1.28
HERC3-207ENST00000452979 KRTAP1-4P0C5Y4 121 aa7.03□□□□□ -1.28
HERC3-207ENST00000452979 HERVK_113P61574 105 aa7.03□□□□□ -1.28
HERC3-207ENST00000452979 UNQ6190/PRO20217Q6UXQ8 127 aa7.03□□□□□ -1.28
HERC3-207ENST00000452979 KRTAP11-1Q8IUC1 163 aa7.03□□□□□ -1.28
HERC3-207ENST00000452979 ZNF625Q96I27 306 aaPredicted RBP7.03□□□□□ -1.28
HERC3-207ENST00000452979 C6orf48Q9UBA6 75 aa7.03□□□□□ -1.28
HERC3-207ENST00000452979 NDUFA1O15239 70 aa7.02□□□□□ -1.29
HERC3-207ENST00000452979 TLX1NBP0CAT3 122 aa7.02□□□□□ -1.29
HERC3-207ENST00000452979 AKR1D1P51857 326 aa7.02□□□□□ -1.29
HERC3-207ENST00000452979 C6orf226Q5I0X4 101 aa7.02□□□□□ -1.29
HERC3-207ENST00000452979 J3QQQ9 107 aa7.01□□□□□ -1.29
HERC3-207ENST00000452979 CXCL5P42830 114 aa7.01□□□□□ -1.29
HERC3-207ENST00000452979 CKS1BP61024 79 aa7.01□□□□□ -1.29
HERC3-207ENST00000452979 PLEKHB2Q96CS7 222 aa7.01□□□□□ -1.29
HERC3-207ENST00000452979 TTTY13Q9BZ97 58 aa7.01□□□□□ -1.29
HERC3-207ENST00000452979 FAM168BA1KXE4 195 aa7□□□□□ -1.29
HERC3-207ENST00000452979 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
HERC3-207ENST00000452979 TRBV30A0A0K0K1B3 111 aa6.99□□□□□ -1.29
HERC3-207ENST00000452979 LGALS3P17931 250 aaKnown RBP6.99□□□□□ -1.29
HERC3-207ENST00000452979 KRTAP7-1Q8IUC3 87 aa6.99□□□□□ -1.29
HERC3-207ENST00000452979 TP73-AS1Q9UF72 201 aa6.99□□□□□ -1.29
HERC3-207ENST00000452979 NDUFA12Q9UI09 145 aa6.99□□□□□ -1.29
HERC3-207ENST00000452979 RPL13AP40429 203 aaKnown RBP6.98□□□□□ -1.29
HERC3-207ENST00000452979 NMUP48645 174 aa6.98□□□□□ -1.29
HERC3-207ENST00000452979 PRR4Q16378 134 aa6.98□□□□□ -1.29
HERC3-207ENST00000452979 PCP2Q8IVA1 136 aa6.98□□□□□ -1.29
HERC3-207ENST00000452979 A0A0U1RQV1 116 aa6.97□□□□□ -1.29
HERC3-207ENST00000452979 PAM16Q9Y3D7 125 aa6.97□□□□□ -1.29
HERC3-207ENST00000452979 HSBP1L1C9JCN9 74 aa6.96□□□□□ -1.3
HERC3-207ENST00000452979 GAGE2EQ4V326 116 aa6.96□□□□□ -1.3
HERC3-207ENST00000452979 SFTA2Q6UW10 78 aa6.96□□□□□ -1.3
HERC3-207ENST00000452979 FAM19A5Q7Z5A7 132 aaPredicted RBP6.96□□□□□ -1.3
HERC3-207ENST00000452979 VAMP8Q9BV40 100 aa6.96□□□□□ -1.3
HERC3-207ENST00000452979 GAGE2DQ9UEU5 116 aa6.96□□□□□ -1.3
HERC3-207ENST00000452979 ERG28Q9UKR5 140 aa6.96□□□□□ -1.3
HERC3-207ENST00000452979 A0A0J9YXY3 114 aa6.95□□□□□ -1.3
HERC3-207ENST00000452979 MYMXA0A1B0GTQ4 84 aa6.95□□□□□ -1.3
HERC3-207ENST00000452979 ZNF815PA8K554 130 aa6.95□□□□□ -1.3
HERC3-207ENST00000452979 NDUFC2-KCTD14E9PQ53 114 aa6.95□□□□□ -1.3
HERC3-207ENST00000452979 HERV-K104P63124 156 aa6.95□□□□□ -1.3
HERC3-207ENST00000452979 SPATA45Q537H7 98 aa6.95□□□□□ -1.3
HERC3-207ENST00000452979 SMIM6P0DI80 62 aa6.94□□□□□ -1.3
HERC3-207ENST00000452979 PFN2P35080 140 aa6.94□□□□□ -1.3
HERC3-207ENST00000452979 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
HERC3-207ENST00000452979 M0QXV9 152 aa6.93□□□□□ -1.3
HERC3-207ENST00000452979 SMIM13P0DJ93 91 aa6.93□□□□□ -1.3
HERC3-207ENST00000452979 MEIG1Q5JSS6 88 aa6.93□□□□□ -1.3
HERC3-207ENST00000452979 LITAFQ99732 161 aa6.93□□□□□ -1.3
HERC3-207ENST00000452979 FAT4Q6V0I7 4981 aa6.92□□□□□ -1.3
HERC3-207ENST00000452979 A0A0U1RRA0 63 aa6.92□□□□□ -1.3
HERC3-207ENST00000452979 ZNF861PO60384 105 aa6.92□□□□□ -1.3
HERC3-207ENST00000452979 COX8AP10176 69 aa6.92□□□□□ -1.3
HERC3-207ENST00000452979 UBE2BP63146 152 aa6.92□□□□□ -1.3
HERC3-207ENST00000452979 C9orf129Q5T035 196 aaKnown RBP6.92□□□□□ -1.3
HERC3-207ENST00000452979 DAND5Q8N907 189 aa6.92□□□□□ -1.3
HERC3-207ENST00000452979 KRTAP3-3Q9BYR6 98 aa6.92□□□□□ -1.3
HERC3-207ENST00000452979 KRTAP3-2Q9BYR7 98 aa6.92□□□□□ -1.3
HERC3-207ENST00000452979 COX17Q14061 63 aa6.91□□□□□ -1.3
HERC3-207ENST00000452979 ADAMTSL4-AS1Q5T5F5 129 aa6.91□□□□□ -1.3
HERC3-207ENST00000452979 BOD1L2Q8IYS8 172 aa6.91□□□□□ -1.3
HERC3-207ENST00000452979 XAGE1AQ9HD64 81 aa6.91□□□□□ -1.3
HERC3-207ENST00000452979 LINC00158P58513 81 aa6.9□□□□□ -1.3
HERC3-207ENST00000452979 MIR7-3HGQ8N6C7 128 aa6.9□□□□□ -1.3
HERC3-207ENST00000452979 C14orf144Q96I85 54 aa6.9□□□□□ -1.3
HERC3-207ENST00000452979 SND1-IT1Q9HBX3 110 aa6.9□□□□□ -1.3
HERC3-207ENST00000452979 SCGB1D4Q6XE38 83 aa6.89□□□□□ -1.31
HERC3-207ENST00000452979 Q8NDZ9 215 aa6.89□□□□□ -1.31
HERC3-207ENST00000452979 MUC17Q685J3 4493 aa6.89□□□□□ -1.31
HERC3-207ENST00000452979 DLEU1O43261 78 aa6.88□□□□□ -1.31
HERC3-207ENST00000452979 EIF4EBP3O60516 100 aaPredicted RBP6.88□□□□□ -1.31
HERC3-207ENST00000452979 TIMM17BO60830 172 aa6.88□□□□□ -1.31
HERC3-207ENST00000452979 SOSTDC1Q6X4U4 206 aa6.88□□□□□ -1.31
HERC3-207ENST00000452979 LINC00587B1AMM8 73 aa6.87□□□□□ -1.31
HERC3-207ENST00000452979 TSPAN13O95857 204 aa6.87□□□□□ -1.31
HERC3-207ENST00000452979 S100A12P80511 92 aa6.87□□□□□ -1.31
HERC3-207ENST00000452979 C2orf91Q6ZV80 131 aa6.87□□□□□ -1.31
HERC3-207ENST00000452979 C22orf24Q9Y442 160 aa6.87□□□□□ -1.31
HERC3-207ENST00000452979 A0A087X002 238 aa6.86□□□□□ -1.31
HERC3-207ENST00000452979 NPC2P61916 151 aa6.86□□□□□ -1.31
HERC3-207ENST00000452979 SLC25A34Q6PIV7 304 aa6.86□□□□□ -1.31
HERC3-207ENST00000452979 C12orf57Q99622 126 aa6.86□□□□□ -1.31
HERC3-207ENST00000452979 SPANXDQ9BXN6 97 aa6.86□□□□□ -1.31
HERC3-207ENST00000452979 SPANXCQ9NY87 97 aa6.86□□□□□ -1.31
HERC3-207ENST00000452979 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
HERC3-207ENST00000452979 TMEM238C9JI98 176 aa6.85□□□□□ -1.31
HERC3-207ENST00000452979 LBHQ53QV2 105 aaPredicted RBP6.85□□□□□ -1.31
HERC3-207ENST00000452979 LOC107984156A0A0G2JMH3 177 aa6.84□□□□□ -1.31
HERC3-207ENST00000452979 VPREB1P12018 145 aa6.84□□□□□ -1.31
HERC3-207ENST00000452979 ARL17AQ8IVW1 177 aa6.84□□□□□ -1.31
HERC3-207ENST00000452979 LINC00518Q8N0U6 118 aa6.84□□□□□ -1.31
HERC3-207ENST00000452979 LINC00308Q8TCZ7 52 aa6.84□□□□□ -1.31
HERC3-207ENST00000452979 PRO1933Q9H354 126 aa6.84□□□□□ -1.31
HERC3-207ENST00000452979 SPANXB1Q9NS25 103 aaPredicted RBP6.84□□□□□ -1.31
HERC3-207ENST00000452979 CRYGAP11844 174 aa6.83□□□□□ -1.32
HERC3-207ENST00000452979 TYMSOSQ8TAI1 123 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms