RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544		J3QR89	54 aa		5.62	□□□□□ -1.51
HCG18-238	ENST00000449544	NDUFS5	O43920	106 aa		5.62	□□□□□ -1.51
HCG18-238	ENST00000449544	PRLH	P81277	87 aa		5.62	□□□□□ -1.51
HCG18-238	ENST00000449544		Q6ZVH6	145 aa		5.62	□□□□□ -1.51
HCG18-238	ENST00000449544	TRAV23DV6	A0A075B6W5	121 aa		5.62	□□□□□ -1.51
HCG18-238	ENST00000449544	DLEU1	O43261	78 aa		5.62	□□□□□ -1.51
HCG18-238	ENST00000449544	YPEL4	Q96NS1	127 aa		5.62	□□□□□ -1.51
HCG18-238	ENST00000449544	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5.61	□□□□□ -1.51
HCG18-238	ENST00000449544	NUPR1	O60356	82 aa		5.61	□□□□□ -1.51
HCG18-238	ENST00000449544	DSCR8	Q96T75	97 aa		5.61	□□□□□ -1.51
HCG18-238	ENST00000449544	WDFY3	Q8IZQ1	3526 aa		5.6	□□□□□ -1.51
HCG18-238	ENST00000449544	SPANXD	Q9BXN6	97 aa		5.6	□□□□□ -1.51
HCG18-238	ENST00000449544	DHRS4-AS1	Q9P1J3	65 aa		5.6	□□□□□ -1.51
HCG18-238	ENST00000449544	VWF	P04275	2813 aa		5.6	□□□□□ -1.51
HCG18-238	ENST00000449544	LINC00173	Q6ZV60	143 aa		5.6	□□□□□ -1.51
HCG18-238	ENST00000449544	TRAC	P01848	142 aa		5.59	□□□□□ -1.51
HCG18-238	ENST00000449544	GTF2H5	Q6ZYL4	71 aa		5.59	□□□□□ -1.51
HCG18-238	ENST00000449544	SMIM1	B2RUZ4	78 aa		5.59	□□□□□ -1.51
HCG18-238	ENST00000449544	IGLC3	P0DOY3	106 aa		5.59	□□□□□ -1.51
HCG18-238	ENST00000449544	C6orf99	Q4VX62	202 aa		5.59	□□□□□ -1.51
HCG18-238	ENST00000449544	IGHV3OR16-9	A0A0B4J2B5	98 aa		5.59	□□□□□ -1.52
HCG18-238	ENST00000449544	hADV29S1	A0JD25	119 aa		5.59	□□□□□ -1.52
HCG18-238	ENST00000449544	SCGB1A1	P11684	91 aa		5.59	□□□□□ -1.52
HCG18-238	ENST00000449544		E9PLD3	99 aa		5.58	□□□□□ -1.52
HCG18-238	ENST00000449544	HSD52	Q0P140	79 aa		5.58	□□□□□ -1.52
HCG18-238	ENST00000449544	MUSTN1	Q8IVN3	82 aa		5.58	□□□□□ -1.52
HCG18-238	ENST00000449544		H0YGX0	51 aa		5.58	□□□□□ -1.52
HCG18-238	ENST00000449544	SPACA4	Q8TDM5	124 aa		5.58	□□□□□ -1.52
HCG18-238	ENST00000449544	COL5A1-AS1	Q5SY13	56 aa		5.58	□□□□□ -1.52
HCG18-238	ENST00000449544		A4D1N5	150 aa		5.57	□□□□□ -1.52
HCG18-238	ENST00000449544	ZNF73	O43830	326 aa	Predicted RBP	5.57	□□□□□ -1.52
HCG18-238	ENST00000449544	LINC01561	Q8N1V8	128 aa		5.57	□□□□□ -1.52
HCG18-238	ENST00000449544	LINC00167	Q96N53	147 aa		5.57	□□□□□ -1.52
HCG18-238	ENST00000449544	C6orf48	Q9UBA6	75 aa		5.57	□□□□□ -1.52
HCG18-238	ENST00000449544	TMEM223	A0PJW6	202 aa		5.57	□□□□□ -1.52
HCG18-238	ENST00000449544	IGIP	A6NJ69	53 aa		5.57	□□□□□ -1.52
HCG18-238	ENST00000449544	SS18L2	Q9UHA2	77 aa		5.57	□□□□□ -1.52
HCG18-238	ENST00000449544		H0Y9J4	135 aa		5.57	□□□□□ -1.52
HCG18-238	ENST00000449544	KRTAP10-2	P60368	255 aa		5.57	□□□□□ -1.52
HCG18-238	ENST00000449544	ANKRD29	Q8N6D5	301 aa		5.57	□□□□□ -1.52
HCG18-238	ENST00000449544	PRR34	Q9NV39	138 aa		5.57	□□□□□ -1.52
HCG18-238	ENST00000449544		A0A0J9YXY3	114 aa		5.56	□□□□□ -1.52
HCG18-238	ENST00000449544	TRBV10-3	A0A0K0K1G6	114 aa		5.56	□□□□□ -1.52
HCG18-238	ENST00000449544	LIMD2	Q9BT23	127 aa		5.56	□□□□□ -1.52
HCG18-238	ENST00000449544		Q6ZR54	194 aa		5.56	□□□□□ -1.52
HCG18-238	ENST00000449544	ORMDL1	Q9P0S3	153 aa		5.56	□□□□□ -1.52
HCG18-238	ENST00000449544	PRO1854	Q9UHT4	67 aa		5.56	□□□□□ -1.52
HCG18-238	ENST00000449544		A0A1B0GWB2	263 aa		5.55	□□□□□ -1.52
HCG18-238	ENST00000449544	C10orf25	Q5T742	122 aa		5.55	□□□□□ -1.52
HCG18-238	ENST00000449544	TTTY13	Q9BZ97	58 aa		5.55	□□□□□ -1.52
HCG18-238	ENST00000449544		H3BMG7	143 aa		5.54	□□□□□ -1.52
HCG18-238	ENST00000449544	KRTAP1-5	Q9BYS1	174 aa		5.54	□□□□□ -1.52
HCG18-238	ENST00000449544	KRTAP10-1	P60331	282 aa		5.54	□□□□□ -1.52
HCG18-238	ENST00000449544	SMCR5	Q8TEV8	140 aa		5.54	□□□□□ -1.52
HCG18-238	ENST00000449544	AMELX	Q99217	191 aa		5.54	□□□□□ -1.52
HCG18-238	ENST00000449544	FAM236D	A0A1B0GTK5	79 aa		5.53	□□□□□ -1.52
HCG18-238	ENST00000449544	PRY	O14603	147 aa		5.53	□□□□□ -1.52
HCG18-238	ENST00000449544	FAM236C	P0DP71	79 aa		5.53	□□□□□ -1.52
HCG18-238	ENST00000449544	LINC00308	Q8TCZ7	52 aa		5.53	□□□□□ -1.52
HCG18-238	ENST00000449544	PRR3	P79522	188 aa	Known RBP	5.53	□□□□□ -1.52
HCG18-238	ENST00000449544	CNBP	P62633	177 aa	Known RBP	5.52	□□□□□ -1.53
HCG18-238	ENST00000449544	WFDC2	Q14508	124 aa		5.52	□□□□□ -1.53
HCG18-238	ENST00000449544	BCE1	O60756	84 aa		5.52	□□□□□ -1.53
HCG18-238	ENST00000449544	TP73-AS1	Q9UF72	201 aa		5.52	□□□□□ -1.53
HCG18-238	ENST00000449544	FAM19A3	Q7Z5A8	133 aa		5.52	□□□□□ -1.53
HCG18-238	ENST00000449544	SRRM2	Q9UQ35	2752 aa	Known RBP	5.52	□□□□□ -1.53
HCG18-238	ENST00000449544	MOBP	Q13875	183 aa		5.51	□□□□□ -1.53
HCG18-238	ENST00000449544		Q6Q795	121 aa		5.51	□□□□□ -1.53
HCG18-238	ENST00000449544	COX6B2	Q6YFQ2	88 aa		5.51	□□□□□ -1.53
HCG18-238	ENST00000449544		H3BUT2	72 aa		5.51	□□□□□ -1.53
HCG18-238	ENST00000449544	COA6	Q5JTJ3	125 aa	Known RBP	5.51	□□□□□ -1.53
HCG18-238	ENST00000449544	LINC01545	Q5VT33	79 aa		5.51	□□□□□ -1.53
HCG18-238	ENST00000449544	C15orf56	Q8N910	161 aa		5.51	□□□□□ -1.53
HCG18-238	ENST00000449544	LINC00304	Q8N9R0	145 aa		5.51	□□□□□ -1.53
HCG18-238	ENST00000449544	CFC1B	P0CG36	223 aa		5.5	□□□□□ -1.53
HCG18-238	ENST00000449544	CFC1	P0CG37	223 aa		5.5	□□□□□ -1.53
HCG18-238	ENST00000449544	ANKRD39	Q53RE8	183 aa		5.5	□□□□□ -1.53
HCG18-238	ENST00000449544		Q9BRP9	147 aa		5.5	□□□□□ -1.53
HCG18-238	ENST00000449544	PSORS1C2	Q9UIG4	136 aa		5.5	□□□□□ -1.53
HCG18-238	ENST00000449544		H3BQ85	93 aa		5.5	□□□□□ -1.53
HCG18-238	ENST00000449544	ZNF861P	O60384	105 aa		5.5	□□□□□ -1.53
HCG18-238	ENST00000449544		Q6ZQY7	126 aa		5.5	□□□□□ -1.53
HCG18-238	ENST00000449544	PLA2G2D	Q9UNK4	145 aa		5.5	□□□□□ -1.53
HCG18-238	ENST00000449544	LST1	O00453	97 aa		5.49	□□□□□ -1.53
HCG18-238	ENST00000449544	IGLV7-43	P04211	117 aa		5.49	□□□□□ -1.53
HCG18-238	ENST00000449544	FAM168B	A1KXE4	195 aa		5.49	□□□□□ -1.53
HCG18-238	ENST00000449544		C9JAW5	83 aa		5.49	□□□□□ -1.53
HCG18-238	ENST00000449544	NAA38	Q9BRA0	125 aa	Known RBP	5.49	□□□□□ -1.53
HCG18-238	ENST00000449544	OCIAD2	Q56VL3	154 aa		5.48	□□□□□ -1.53
HCG18-238	ENST00000449544	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.48	□□□□□ -1.53
HCG18-238	ENST00000449544	TEX49	A0A1B0GTD5	131 aa		5.48	□□□□□ -1.53
HCG18-238	ENST00000449544	COX8A	P10176	69 aa		5.48	□□□□□ -1.53
HCG18-238	ENST00000449544	SDIM1	Q6ZPB5	146 aa		5.47	□□□□□ -1.53
HCG18-238	ENST00000449544	SPCS1	Q9Y6A9	102 aa		5.47	□□□□□ -1.53
HCG18-238	ENST00000449544	NREP	Q16612	68 aa		5.47	□□□□□ -1.53
HCG18-238	ENST00000449544	UBE2V1	Q13404	147 aa		5.47	□□□□□ -1.53
HCG18-238	ENST00000449544		Q8N1X5	172 aa		5.47	□□□□□ -1.53
HCG18-238	ENST00000449544	CSMD1	Q96PZ7	3565 aa		5.47	□□□□□ -1.53
HCG18-238	ENST00000449544	SPAG11A	Q6PDA7	123 aa		5.46	□□□□□ -1.53
HCG18-238	ENST00000449544	TRBV10-2	A0A0K0K1G8	114 aa		5.46	□□□□□ -1.54

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