RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 TSPAN13O95857 204 aa6.32□□□□□ -1.4
RFC4-210ENST00000449502 CNBPP62633 177 aaKnown RBP6.32□□□□□ -1.4
RFC4-210ENST00000449502 S100A7L2Q5SY68 101 aa6.32□□□□□ -1.4
RFC4-210ENST00000449502 Q6ZRN7 208 aaPredicted RBP6.32□□□□□ -1.4
RFC4-210ENST00000449502 A0A087WTM6 91 aa6.31□□□□□ -1.4
RFC4-210ENST00000449502 LRCOL1A6NCL2 159 aa6.31□□□□□ -1.4
RFC4-210ENST00000449502 NCR3O14931 201 aa6.31□□□□□ -1.4
RFC4-210ENST00000449502 SLPIP03973 132 aa6.31□□□□□ -1.4
RFC4-210ENST00000449502 Q6ZRP5 223 aa6.31□□□□□ -1.4
RFC4-210ENST00000449502 GTF2H5Q6ZYL4 71 aa6.31□□□□□ -1.4
RFC4-210ENST00000449502 Q8N814 137 aa6.31□□□□□ -1.4
RFC4-210ENST00000449502 PLECQ15149 4684 aaKnown RBP6.31□□□□□ -1.4
RFC4-210ENST00000449502 COL7A1Q02388 2944 aa6.3□□□□□ -1.4
RFC4-210ENST00000449502 GAGE10A6NGK3 116 aa6.3□□□□□ -1.4
RFC4-210ENST00000449502 NKAPP1Q8N9T2 125 aa6.3□□□□□ -1.4
RFC4-210ENST00000449502 CBY1Q9Y3M2 126 aa6.3□□□□□ -1.4
RFC4-210ENST00000449502 SPCS1Q9Y6A9 102 aa6.3□□□□□ -1.4
RFC4-210ENST00000449502 IGKV2-28A0A075B6P5 120 aa6.29□□□□□ -1.4
RFC4-210ENST00000449502 TRBV10-2A0A0K0K1G8 114 aa6.29□□□□□ -1.4
RFC4-210ENST00000449502 IGKV2D-28P01615 120 aa6.29□□□□□ -1.4
RFC4-210ENST00000449502 TMEM126AQ9H061 195 aa6.29□□□□□ -1.4
RFC4-210ENST00000449502 M0R378 163 aa6.28□□□□□ -1.4
RFC4-210ENST00000449502 PRR3P79522 188 aaKnown RBP6.28□□□□□ -1.4
RFC4-210ENST00000449502 LINC00337Q8N6G1 96 aa6.28□□□□□ -1.4
RFC4-210ENST00000449502 K7EP34 96 aa6.27□□□□□ -1.41
RFC4-210ENST00000449502 DPH3Q96FX2 82 aa6.27□□□□□ -1.41
RFC4-210ENST00000449502 LINC00474Q9P2X8 69 aa6.27□□□□□ -1.41
RFC4-210ENST00000449502 VPS13DQ5THJ4 4388 aa6.27□□□□□ -1.41
RFC4-210ENST00000449502 DNAH7Q8WXX0 4024 aa6.27□□□□□ -1.41
RFC4-210ENST00000449502 STARD9Q9P2P6 4700 aa6.27□□□□□ -1.41
RFC4-210ENST00000449502 DNAH1Q9P2D7 4330 aa6.26□□□□□ -1.41
RFC4-210ENST00000449502 TRBV20-1A0A075B6N2 111 aa6.26□□□□□ -1.41
RFC4-210ENST00000449502 IGLV5-52A0A0A0MRZ9 124 aa6.26□□□□□ -1.41
RFC4-210ENST00000449502 IGKV2-24A0A0C4DH68 120 aa6.26□□□□□ -1.41
RFC4-210ENST00000449502 C16orf90A8MZG2 172 aa6.26□□□□□ -1.41
RFC4-210ENST00000449502 TRIAP1O43715 76 aa6.26□□□□□ -1.41
RFC4-210ENST00000449502 VPREB1P12018 145 aa6.26□□□□□ -1.41
RFC4-210ENST00000449502 C9orf129Q5T035 196 aaKnown RBP6.26□□□□□ -1.41
RFC4-210ENST00000449502 C9orf163Q8N9P6 203 aa6.26□□□□□ -1.41
RFC4-210ENST00000449502 PLA2G2DQ9UNK4 145 aa6.26□□□□□ -1.41
RFC4-210ENST00000449502 LCE6AA0A183 80 aa6.25□□□□□ -1.41
RFC4-210ENST00000449502 RTL8CO15255 209 aa6.25□□□□□ -1.41
RFC4-210ENST00000449502 SNCGO76070 127 aa6.25□□□□□ -1.41
RFC4-210ENST00000449502 RPL28P46779 137 aaKnown RBP6.25□□□□□ -1.41
RFC4-210ENST00000449502 ATXN8Q156A1 80 aa6.25□□□□□ -1.41
RFC4-210ENST00000449502 SMIM11BQ8TCY0 68 aa6.25□□□□□ -1.41
RFC4-210ENST00000449502 UBE2V1Q13404 147 aa6.24□□□□□ -1.41
RFC4-210ENST00000449502 FAM19A5Q7Z5A7 132 aaPredicted RBP6.24□□□□□ -1.41
RFC4-210ENST00000449502 A0A096LNI7 61 aa6.23□□□□□ -1.41
RFC4-210ENST00000449502 TRBV10-3A0A0K0K1G6 114 aa6.23□□□□□ -1.41
RFC4-210ENST00000449502 H0YGX0 51 aa6.23□□□□□ -1.41
RFC4-210ENST00000449502 TNP2Q05952 138 aa6.23□□□□□ -1.41
RFC4-210ENST00000449502 Q8NDZ9 215 aa6.23□□□□□ -1.41
RFC4-210ENST00000449502 TRAV23DV6A0A075B6W5 121 aa6.22□□□□□ -1.41
RFC4-210ENST00000449502 IGLV6-57P01721 117 aa6.22□□□□□ -1.41
RFC4-210ENST00000449502 SERTAD4-AS1Q5TG53 156 aa6.22□□□□□ -1.41
RFC4-210ENST00000449502 DIRC1Q969H9 104 aa6.22□□□□□ -1.41
RFC4-210ENST00000449502 C22orf24Q9Y442 160 aa6.22□□□□□ -1.41
RFC4-210ENST00000449502 ALMS1Q8TCU4 4167 aa6.22□□□□□ -1.41
RFC4-210ENST00000449502 IGLV5-37A0A075B6J1 123 aa6.21□□□□□ -1.42
RFC4-210ENST00000449502 TCL1BO95988 128 aa6.21□□□□□ -1.42
RFC4-210ENST00000449502 LINC01620Q4KN68 170 aa6.21□□□□□ -1.42
RFC4-210ENST00000449502 SDIM1Q6ZPB5 146 aa6.21□□□□□ -1.42
RFC4-210ENST00000449502 MRPL55Q7Z7F7 128 aaKnown RBP6.21□□□□□ -1.42
RFC4-210ENST00000449502 FAM168BA1KXE4 195 aa6.2□□□□□ -1.42
RFC4-210ENST00000449502 H3BMG7 143 aa6.2□□□□□ -1.42
RFC4-210ENST00000449502 M0QXV9 152 aa6.2□□□□□ -1.42
RFC4-210ENST00000449502 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
RFC4-210ENST00000449502 C6orf99Q4VX62 202 aa6.2□□□□□ -1.42
RFC4-210ENST00000449502 C7orf33Q8WU49 177 aa6.2□□□□□ -1.42
RFC4-210ENST00000449502 CLEC2BQ92478 149 aa6.2□□□□□ -1.42
RFC4-210ENST00000449502 SLC25A20O43772 301 aa6.19□□□□□ -1.42
RFC4-210ENST00000449502 ZNF73O43830 326 aaPredicted RBP6.19□□□□□ -1.42
RFC4-210ENST00000449502 DNAL4O96015 105 aa6.19□□□□□ -1.42
RFC4-210ENST00000449502 LINC00336Q6ZUF6 198 aa6.19□□□□□ -1.42
RFC4-210ENST00000449502 A0A1W2PNN7 141 aa6.18□□□□□ -1.42
RFC4-210ENST00000449502 RPL37AP8A6NKH3 93 aa6.18□□□□□ -1.42
RFC4-210ENST00000449502 LST1O00453 97 aa6.18□□□□□ -1.42
RFC4-210ENST00000449502 PRYO14603 147 aa6.18□□□□□ -1.42
RFC4-210ENST00000449502 COX7BP24311 80 aa6.18□□□□□ -1.42
RFC4-210ENST00000449502 FUSP35637 526 aaKnown RBP eCLIP6.18□□□□□ -1.42
RFC4-210ENST00000449502 UBE2BP63146 152 aa6.18□□□□□ -1.42
RFC4-210ENST00000449502 LINC00167Q96N53 147 aa6.18□□□□□ -1.42
RFC4-210ENST00000449502 C9JAW5 83 aa6.17□□□□□ -1.42
RFC4-210ENST00000449502 F8W1H4 67 aa6.17□□□□□ -1.42
RFC4-210ENST00000449502 CSMD3Q7Z407 3707 aa6.17□□□□□ -1.42
RFC4-210ENST00000449502 IGLV1-50A0A075B6I6 118 aa6.16□□□□□ -1.42
RFC4-210ENST00000449502 TRBV7-6A0A0J9YX20 115 aa6.16□□□□□ -1.42
RFC4-210ENST00000449502 ETDCA0A1B0GVM5 59 aa6.16□□□□□ -1.42
RFC4-210ENST00000449502 A0A1B0GX51 115 aa6.16□□□□□ -1.42
RFC4-210ENST00000449502 TRACP01848 142 aa6.16□□□□□ -1.42
RFC4-210ENST00000449502 SPACA4Q8TDM5 124 aa6.16□□□□□ -1.42
RFC4-210ENST00000449502 KCNQ1DNQ9H478 68 aa6.16□□□□□ -1.42
RFC4-210ENST00000449502 hADV29S1A0JD25 119 aa6.14□□□□□ -1.43
RFC4-210ENST00000449502 GHRHP01286 108 aa6.14□□□□□ -1.43
RFC4-210ENST00000449502 REG3GQ6UW15 175 aa6.14□□□□□ -1.43
RFC4-210ENST00000449502 PHF5AQ7RTV0 110 aaKnown RBP6.14□□□□□ -1.43
RFC4-210ENST00000449502 MTURNQ8N3F0 131 aa6.14□□□□□ -1.43
RFC4-210ENST00000449502 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
RFC4-210ENST00000449502 A0A087WYN8 130 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms