RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 A0A096LNI7 61 aa5.86□□□□□ -1.47
RFX3-207ENST00000449190 PFN2P35080 140 aa5.86□□□□□ -1.47
RFX3-207ENST00000449190 LINC00158P58513 81 aa5.86□□□□□ -1.47
RFX3-207ENST00000449190 CIRBPQ14011 172 aaKnown RBP5.86□□□□□ -1.47
RFX3-207ENST00000449190 CHTF8P0CG12 524 aa5.85□□□□□ -1.47
RFX3-207ENST00000449190 HAMPP81172 84 aa5.85□□□□□ -1.47
RFX3-207ENST00000449190 Q5VSD8 79 aa5.85□□□□□ -1.47
RFX3-207ENST00000449190 Q6ZRP5 223 aa5.85□□□□□ -1.47
RFX3-207ENST00000449190 SPACA4Q8TDM5 124 aa5.85□□□□□ -1.47
RFX3-207ENST00000449190 DNAH8Q96JB1 4490 aa5.85□□□□□ -1.47
RFX3-207ENST00000449190 ZNF815PA8K554 130 aa5.84□□□□□ -1.47
RFX3-207ENST00000449190 INAFM2P0DMQ5 153 aa5.84□□□□□ -1.47
RFX3-207ENST00000449190 TSPEAR-AS2P59090 65 aa5.84□□□□□ -1.47
RFX3-207ENST00000449190 JOSD1Q15040 202 aaPredicted RBP5.84□□□□□ -1.47
RFX3-207ENST00000449190 A0A087WYN8 130 aa5.83□□□□□ -1.48
RFX3-207ENST00000449190 A0A0U1RRA0 63 aa5.83□□□□□ -1.48
RFX3-207ENST00000449190 SMIM13P0DJ93 91 aa5.83□□□□□ -1.48
RFX3-207ENST00000449190 ANKRD39Q53RE8 183 aa5.83□□□□□ -1.48
RFX3-207ENST00000449190 SCXQ7RTU7 201 aa5.83□□□□□ -1.48
RFX3-207ENST00000449190 CIRBP-AS1Q8TBR5 109 aa5.83□□□□□ -1.48
RFX3-207ENST00000449190 IGKV2D-26A0A0A0MRZ7 120 aa5.82□□□□□ -1.48
RFX3-207ENST00000449190 PANO1I0J062 215 aa5.82□□□□□ -1.48
RFX3-207ENST00000449190 PLA2G1BP04054 148 aaKnown RBP5.82□□□□□ -1.48
RFX3-207ENST00000449190 SCGB1D4Q6XE38 83 aa5.82□□□□□ -1.48
RFX3-207ENST00000449190 KRTAP9-8Q9BYQ0 159 aa5.82□□□□□ -1.48
RFX3-207ENST00000449190 XAGE1AQ9HD64 81 aa5.82□□□□□ -1.48
RFX3-207ENST00000449190 PLAC8Q9NZF1 115 aa5.82□□□□□ -1.48
RFX3-207ENST00000449190 A0A0J9YXY3 114 aa5.81□□□□□ -1.48
RFX3-207ENST00000449190 RPL24P83731 157 aaKnown RBP5.81□□□□□ -1.48
RFX3-207ENST00000449190 VAMP8Q9BV40 100 aa5.81□□□□□ -1.48
RFX3-207ENST00000449190 SND1-IT1Q9HBX3 110 aa5.81□□□□□ -1.48
RFX3-207ENST00000449190 HSPG2P98160 4391 aa5.81□□□□□ -1.48
RFX3-207ENST00000449190 A0A1W2PNN7 141 aa5.8□□□□□ -1.48
RFX3-207ENST00000449190 LBHQ53QV2 105 aaPredicted RBP5.8□□□□□ -1.48
RFX3-207ENST00000449190 C9orf129Q5T035 196 aaKnown RBP5.8□□□□□ -1.48
RFX3-207ENST00000449190 FAM19A5Q7Z5A7 132 aaPredicted RBP5.8□□□□□ -1.48
RFX3-207ENST00000449190 MIR7-3HGQ8N6C7 128 aa5.8□□□□□ -1.48
RFX3-207ENST00000449190 C7orf33Q8WU49 177 aa5.8□□□□□ -1.48
RFX3-207ENST00000449190 MIEN1Q9BRT3 115 aa5.8□□□□□ -1.48
RFX3-207ENST00000449190 APOBP04114 4563 aaKnown RBP5.79□□□□□ -1.48
RFX3-207ENST00000449190 TIMM17BO60830 172 aa5.79□□□□□ -1.48
RFX3-207ENST00000449190 SPATA45Q537H7 98 aa5.79□□□□□ -1.48
RFX3-207ENST00000449190 PCP2Q8IVA1 136 aa5.79□□□□□ -1.48
RFX3-207ENST00000449190 NKAPP1Q8N9T2 125 aa5.79□□□□□ -1.48
RFX3-207ENST00000449190 COPS9Q8WXC6 57 aa5.79□□□□□ -1.48
RFX3-207ENST00000449190 TTTY13Q9BZ97 58 aa5.79□□□□□ -1.48
RFX3-207ENST00000449190 PLA2G2DQ9UNK4 145 aa5.79□□□□□ -1.48
RFX3-207ENST00000449190 PAM16Q9Y3D7 125 aa5.79□□□□□ -1.48
RFX3-207ENST00000449190 FAM168BA1KXE4 195 aa5.78□□□□□ -1.48
RFX3-207ENST00000449190 TMEM238C9JI98 176 aa5.78□□□□□ -1.48
RFX3-207ENST00000449190 S100A12P80511 92 aa5.78□□□□□ -1.48
RFX3-207ENST00000449190 PYY3Q5JQD4 70 aa5.78□□□□□ -1.48
RFX3-207ENST00000449190 M0QXV9 152 aa5.77□□□□□ -1.49
RFX3-207ENST00000449190 COX8AP10176 69 aa5.77□□□□□ -1.49
RFX3-207ENST00000449190 UBE2BP63146 152 aa5.77□□□□□ -1.49
RFX3-207ENST00000449190 BOD1L2Q8IYS8 172 aa5.77□□□□□ -1.49
RFX3-207ENST00000449190 DAND5Q8N907 189 aa5.77□□□□□ -1.49
RFX3-207ENST00000449190 C22orf24Q9Y442 160 aa5.77□□□□□ -1.49
RFX3-207ENST00000449190 SERTAD4-AS1Q5TG53 156 aa5.76□□□□□ -1.49
RFX3-207ENST00000449190 Q6ZVH6 145 aa5.76□□□□□ -1.49
RFX3-207ENST00000449190 PHF5AQ7RTV0 110 aaKnown RBP5.76□□□□□ -1.49
RFX3-207ENST00000449190 PCLOQ9Y6V0 5065 aa5.75□□□□□ -1.49
RFX3-207ENST00000449190 IGLV5-37A0A075B6J1 123 aa5.75□□□□□ -1.49
RFX3-207ENST00000449190 DLEU1O43261 78 aa5.75□□□□□ -1.49
RFX3-207ENST00000449190 NPC2P61916 151 aa5.75□□□□□ -1.49
RFX3-207ENST00000449190 SRSF9Q13242 221 aaKnown RBP eCLIP5.75□□□□□ -1.49
RFX3-207ENST00000449190 ADAMTSL4-AS1Q5T5F5 129 aa5.75□□□□□ -1.49
RFX3-207ENST00000449190 SLC25A34Q6PIV7 304 aa5.75□□□□□ -1.49
RFX3-207ENST00000449190 MRPL55Q7Z7F7 128 aaKnown RBP5.75□□□□□ -1.49
RFX3-207ENST00000449190 C14orf144Q96I85 54 aa5.75□□□□□ -1.49
RFX3-207ENST00000449190 SPANXDQ9BXN6 97 aa5.75□□□□□ -1.49
RFX3-207ENST00000449190 SPANXCQ9NY87 97 aa5.75□□□□□ -1.49
RFX3-207ENST00000449190 TP73-AS1Q9UF72 201 aa5.75□□□□□ -1.49
RFX3-207ENST00000449190 ABCA13Q86UQ4 5058 aa5.74□□□□□ -1.49
RFX3-207ENST00000449190 LOC107984156A0A0G2JMH3 177 aa5.74□□□□□ -1.49
RFX3-207ENST00000449190 M0R378 163 aa5.74□□□□□ -1.49
RFX3-207ENST00000449190 IFITM1P13164 125 aa5.74□□□□□ -1.49
RFX3-207ENST00000449190 KRTAP10-4P60372 401 aaPredicted RBP5.74□□□□□ -1.49
RFX3-207ENST00000449190 RPL37AP61513 92 aaKnown RBP5.74□□□□□ -1.49
RFX3-207ENST00000449190 ARL17AQ8IVW1 177 aa5.74□□□□□ -1.49
RFX3-207ENST00000449190 LINC00308Q8TCZ7 52 aa5.74□□□□□ -1.49
RFX3-207ENST00000449190 GAGE10A6NGK3 116 aa5.73□□□□□ -1.49
RFX3-207ENST00000449190 VPREB1P12018 145 aa5.73□□□□□ -1.49
RFX3-207ENST00000449190 LINC00167Q96N53 147 aa5.73□□□□□ -1.49
RFX3-207ENST00000449190 LITAFQ99732 161 aa5.73□□□□□ -1.49
RFX3-207ENST00000449190 NCR3O14931 201 aa5.72□□□□□ -1.49
RFX3-207ENST00000449190 NDUFC2O95298 119 aa5.72□□□□□ -1.49
RFX3-207ENST00000449190 SMIM6P0DI80 62 aa5.72□□□□□ -1.49
RFX3-207ENST00000449190 KRTAP7-1Q8IUC3 87 aa5.72□□□□□ -1.49
RFX3-207ENST00000449190 HIST1H4GQ99525 98 aa5.72□□□□□ -1.49
RFX3-207ENST00000449190 SPANXB1Q9NS25 103 aaPredicted RBP5.72□□□□□ -1.49
RFX3-207ENST00000449190 LOC105371267A0A1B0GV96 52 aa5.71□□□□□ -1.5
RFX3-207ENST00000449190 RPL37AP8A6NKH3 93 aa5.71□□□□□ -1.5
RFX3-207ENST00000449190 KRTAP29-1A8MX34 341 aaPredicted RBP5.71□□□□□ -1.5
RFX3-207ENST00000449190 PRR3P79522 188 aaKnown RBP5.71□□□□□ -1.5
RFX3-207ENST00000449190 S100A7L2Q5SY68 101 aa5.71□□□□□ -1.5
RFX3-207ENST00000449190 MUSTN1Q8IVN3 82 aa5.71□□□□□ -1.5
RFX3-207ENST00000449190 LINC00518Q8N0U6 118 aa5.71□□□□□ -1.5
RFX3-207ENST00000449190 TRBV10-2A0A0K0K1G8 114 aa5.7□□□□□ -1.5
RFX3-207ENST00000449190 C1orf137Q5JT78 98 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms