RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 HIST1H2BJP06899 126 aa7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 SMIM13P0DJ93 91 aa7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 HIST1H2BOP23527 126 aa7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 HIST1H2BBP33778 126 aa7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 HIST1H2BDP58876 126 aa7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 HIST1H2BCP62807 126 aa7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 RPL24P83731 157 aaKnown RBP7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 HIST2H2BEQ16778 126 aa7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 HIST1H2BHQ93079 126 aa7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 HIST1H2BNQ99877 126 aa7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 HIST1H2BMQ99879 126 aa7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 PMCHL2Q9BQD1 86 aa7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 IGLV1-50A0A075B6I6 118 aa7.63□□□□□ -1.19
PRPF40A-203ENST00000448428 PLNP26678 52 aa7.63□□□□□ -1.19
PRPF40A-203ENST00000448428 RPL28P46779 137 aaKnown RBP7.63□□□□□ -1.19
PRPF40A-203ENST00000448428 NDUFA12Q9UI09 145 aa7.63□□□□□ -1.19
PRPF40A-203ENST00000448428 LEPROTO15243 131 aa7.62□□□□□ -1.19
PRPF40A-203ENST00000448428 DPM2O94777 84 aa7.62□□□□□ -1.19
PRPF40A-203ENST00000448428 TSPEAR-AS2P59090 65 aa7.62□□□□□ -1.19
PRPF40A-203ENST00000448428 HERV-K104P63124 156 aa7.62□□□□□ -1.19
PRPF40A-203ENST00000448428 MEIG1Q5JSS6 88 aa7.62□□□□□ -1.19
PRPF40A-203ENST00000448428 MAP1LC3CQ9BXW4 147 aa7.62□□□□□ -1.19
PRPF40A-203ENST00000448428 MYMXA0A1B0GTQ4 84 aa7.61□□□□□ -1.19
PRPF40A-203ENST00000448428 ATP6V1G1O75348 118 aa7.61□□□□□ -1.19
PRPF40A-203ENST00000448428 IGKCP01834 107 aa7.61□□□□□ -1.19
PRPF40A-203ENST00000448428 KRTAP13-1Q8IUC0 172 aa7.61□□□□□ -1.19
PRPF40A-203ENST00000448428 TMEM238C9JI98 176 aa7.6□□□□□ -1.19
PRPF40A-203ENST00000448428 MIR7-3HGQ8N6C7 128 aa7.6□□□□□ -1.19
PRPF40A-203ENST00000448428 PLEKHB2Q96CS7 222 aa7.6□□□□□ -1.19
PRPF40A-203ENST00000448428 LINC00587B1AMM8 73 aa7.59□□□□□ -1.19
PRPF40A-203ENST00000448428 J3QQQ9 107 aa7.59□□□□□ -1.19
PRPF40A-203ENST00000448428 UBE2AP49459 152 aa7.59□□□□□ -1.19
PRPF40A-203ENST00000448428 TMEM126AQ9H061 195 aa7.59□□□□□ -1.19
PRPF40A-203ENST00000448428 HMCN2Q8NDA2 5059 aa7.59□□□□□ -1.19
PRPF40A-203ENST00000448428 SYS1-DBNDD2H3BUS1 97 aa7.58□□□□□ -1.2
PRPF40A-203ENST00000448428 M0R378 163 aa7.58□□□□□ -1.2
PRPF40A-203ENST00000448428 HERVK_113P61574 105 aa7.58□□□□□ -1.2
PRPF40A-203ENST00000448428 BOD1L2Q8IYS8 172 aa7.58□□□□□ -1.2
PRPF40A-203ENST00000448428 RPL13AP40429 203 aaKnown RBP7.57□□□□□ -1.2
PRPF40A-203ENST00000448428 PRLHP81277 87 aa7.57□□□□□ -1.2
PRPF40A-203ENST00000448428 FAM19A1Q7Z5A9 133 aa7.57□□□□□ -1.2
PRPF40A-203ENST00000448428 LGALS3P17931 250 aaKnown RBP7.56□□□□□ -1.2
PRPF40A-203ENST00000448428 DAND5Q8N907 189 aa7.56□□□□□ -1.2
PRPF40A-203ENST00000448428 A0A087X002 238 aa7.55□□□□□ -1.2
PRPF40A-203ENST00000448428 NMUP48645 174 aa7.55□□□□□ -1.2
PRPF40A-203ENST00000448428 ANAPC11Q9NYG5 84 aa7.55□□□□□ -1.2
PRPF40A-203ENST00000448428 LOC107984156A0A0G2JMH3 177 aa7.54□□□□□ -1.2
PRPF40A-203ENST00000448428 E9PLD3 99 aa7.54□□□□□ -1.2
PRPF40A-203ENST00000448428 NCR3O14931 201 aa7.54□□□□□ -1.2
PRPF40A-203ENST00000448428 COA6Q5JTJ3 125 aaKnown RBP7.54□□□□□ -1.2
PRPF40A-203ENST00000448428 LINC01545Q5VT33 79 aa7.54□□□□□ -1.2
PRPF40A-203ENST00000448428 ARL17AQ8IVW1 177 aa7.54□□□□□ -1.2
PRPF40A-203ENST00000448428 IGKV2D-26A0A0A0MRZ7 120 aa7.53□□□□□ -1.2
PRPF40A-203ENST00000448428 PET117Q6UWS5 81 aa7.53□□□□□ -1.2
PRPF40A-203ENST00000448428 C3orf79P0CE67 100 aa7.52□□□□□ -1.21
PRPF40A-203ENST00000448428 CRYGAP11844 174 aa7.52□□□□□ -1.21
PRPF40A-203ENST00000448428 A0A0J9YXY3 114 aa7.51□□□□□ -1.21
PRPF40A-203ENST00000448428 TRBV10-3A0A0K0K1G6 114 aa7.51□□□□□ -1.21
PRPF40A-203ENST00000448428 ADAMTSL4-AS1Q5T5F5 129 aa7.51□□□□□ -1.21
PRPF40A-203ENST00000448428 KCNQ1DNQ9H478 68 aa7.51□□□□□ -1.21
PRPF40A-203ENST00000448428 PRYO14603 147 aa7.5□□□□□ -1.21
PRPF40A-203ENST00000448428 KRTAP13-2Q52LG2 175 aa7.5□□□□□ -1.21
PRPF40A-203ENST00000448428 TYMSOSQ8TAI1 123 aa7.5□□□□□ -1.21
PRPF40A-203ENST00000448428 EIF4EBP3O60516 100 aaPredicted RBP7.49□□□□□ -1.21
PRPF40A-203ENST00000448428 SPRR1AP35321 89 aa7.49□□□□□ -1.21
PRPF40A-203ENST00000448428 KRTDAPP60985 99 aa7.49□□□□□ -1.21
PRPF40A-203ENST00000448428 FAM229BQ4G0N7 80 aa7.49□□□□□ -1.21
PRPF40A-203ENST00000448428 HIGD2AQ9BW72 106 aa7.49□□□□□ -1.21
PRPF40A-203ENST00000448428 TRBV10-2A0A0K0K1G8 114 aa7.48□□□□□ -1.21
PRPF40A-203ENST00000448428 KRTAP4-16G5E9R7 235 aaPredicted RBP7.48□□□□□ -1.21
PRPF40A-203ENST00000448428 SOSTDC1Q6X4U4 206 aa7.48□□□□□ -1.21
PRPF40A-203ENST00000448428 LINC00337Q8N6G1 96 aa7.48□□□□□ -1.21
PRPF40A-203ENST00000448428 MIEN1Q9BRT3 115 aa7.48□□□□□ -1.21
PRPF40A-203ENST00000448428 NDUFC2O95298 119 aa7.47□□□□□ -1.21
PRPF40A-203ENST00000448428 TSPAN13O95857 204 aa7.47□□□□□ -1.21
PRPF40A-203ENST00000448428 NPC2P61916 151 aa7.47□□□□□ -1.21
PRPF40A-203ENST00000448428 S100A1P23297 94 aa7.46□□□□□ -1.22
PRPF40A-203ENST00000448428 DDTP30046 118 aa7.46□□□□□ -1.22
PRPF40A-203ENST00000448428 LITAFQ99732 161 aa7.46□□□□□ -1.22
PRPF40A-203ENST00000448428 SPANXB1Q9NS25 103 aaPredicted RBP7.46□□□□□ -1.22
PRPF40A-203ENST00000448428 ETDCA0A1B0GVM5 59 aa7.45□□□□□ -1.22
PRPF40A-203ENST00000448428 SMCR5Q8TEV8 140 aa7.45□□□□□ -1.22
PRPF40A-203ENST00000448428 SPRR4Q96PI1 79 aa7.45□□□□□ -1.22
PRPF40A-203ENST00000448428 TTTY13Q9BZ97 58 aa7.45□□□□□ -1.22
PRPF40A-203ENST00000448428 ZNF815PA8K554 130 aa7.44□□□□□ -1.22
PRPF40A-203ENST00000448428 B5MCH6 92 aa7.44□□□□□ -1.22
PRPF40A-203ENST00000448428 TIMM17BO60830 172 aa7.44□□□□□ -1.22
PRPF40A-203ENST00000448428 IGLV6-57P01721 117 aa7.44□□□□□ -1.22
PRPF40A-203ENST00000448428 S100A12P80511 92 aa7.44□□□□□ -1.22
PRPF40A-203ENST00000448428 S100A7L2Q5SY68 101 aa7.43□□□□□ -1.22
PRPF40A-203ENST00000448428 LINC00308Q8TCZ7 52 aa7.43□□□□□ -1.22
PRPF40A-203ENST00000448428 C20orf202A1L168 122 aa7.42□□□□□ -1.22
PRPF40A-203ENST00000448428 PRR4Q16378 134 aa7.42□□□□□ -1.22
PRPF40A-203ENST00000448428 ATOH7Q8N100 152 aa7.42□□□□□ -1.22
PRPF40A-203ENST00000448428 C3orf22Q8N5N4 141 aa7.42□□□□□ -1.22
PRPF40A-203ENST00000448428 LRP2P98164 4655 aa7.42□□□□□ -1.22
PRPF40A-203ENST00000448428 UBR4Q5T4S7 5183 aa7.41□□□□□ -1.22
PRPF40A-203ENST00000448428 ANKRD39Q53RE8 183 aa7.41□□□□□ -1.22
PRPF40A-203ENST00000448428 LINC00304Q8N9R0 145 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms